Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1141X
         (456 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       25   1.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   5.1  

>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 123 FSLEGKAELGKLRAVAVSQFSWSKVRESVLIIS-TDPAHNISDAFTRNFLKYQQR 284
           F++ G  ELG  R +    FS + V+ SVL     D + + S    RN  K   R
Sbjct: 314 FAMCGGGELGAARNLPFRSFSTNLVKHSVLATDLADGSSSSSKLMRRNRRKLAYR 368


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +2

Query: 161 CSCSLAVQLVESSRICVNHIN*SCPQYL*CIHQKFSKVPTKVKRFDNLFAMEIDPN-VGL 337
           CS + A        +   H + +  +YL C +Q    + TK K F +L   E D + + L
Sbjct: 53  CSDNAAQLTYRLPALSNRHNDNATAEYLSCYYQNVRGLRTKTKEF-HLAVSEADFDLIAL 111

Query: 338 TE 343
           TE
Sbjct: 112 TE 113


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 175  ETATARSFPNSAFPSNENPP*R 110
            +T  A   PNSA P+ + PP R
Sbjct: 1114 KTLVATILPNSAKPAQQPPPLR 1135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,354
Number of Sequences: 2352
Number of extensions: 6709
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)