Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1141X
         (456 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim...    70   7e-13
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim...    70   7e-13
At5g60730.1 68418.m07620 anion-transporting ATPase family protei...    38   0.003
At3g10350.1 68416.m01241 anion-transporting ATPase family protei...    37   0.006
At2g02780.1 68415.m00221 leucine-rich repeat transmembrane prote...    29   2.0  
At1g72110.1 68414.m08335 expressed protein                             28   2.6  

>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
           similar to SP|O43681 Arsenical pump-driving ATPase (EC
           3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
           resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
           (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
           Anion-transporting ATPase
          Length = 353

 Score = 70.1 bits (164), Expect = 7e-13
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
 Frame = +2

Query: 77  EPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLVESSRICVNHIN*SCPQYL*-CI 253
           E +++N++DQ+SL+W+F           CS  LA+ L  S R  V  I+      L    
Sbjct: 7   EATVQNILDQESLKWVFVGGKGGVGKTTCSSILAICLA-SVRSSVLIISTDPAHNLSDAF 65

Query: 254 HQKFSKVPTKVKRFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGI 433
            Q+F+K PT V+ F NLFAME+DP V   ++        ++ M    G+  ++  A PGI
Sbjct: 66  QQRFTKSPTLVQGFSNLFAMEVDPTVETDDM------AGTDGM---DGLFSDLANAIPGI 116

Query: 434 DEAMSYA 454
           DEAMS+A
Sbjct: 117 DEAMSFA 123



 Score = 52.4 bits (120), Expect = 1e-07
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = +3

Query: 135 GKAELGKLRAVAVSQFSWSKVRESVLIISTDPAHNISDAFTRNFLKYQQRLKGLT 299
           GK  +GK    ++     + VR SVLIISTDPAHN+SDAF + F K    ++G +
Sbjct: 26  GKGGVGKTTCSSILAICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTLVQGFS 80


>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
           similar to SP|O43681 Arsenical pump-driving ATPase (EC
           3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
           resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
           (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
           Anion-transporting ATPase
          Length = 353

 Score = 70.1 bits (164), Expect = 7e-13
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
 Frame = +2

Query: 77  EPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLVESSRICVNHIN*SCPQYL*-CI 253
           E +++N++DQ+SL+W+F           CS  LA+ L  S R  V  I+      L    
Sbjct: 7   EATVQNILDQESLKWVFVGGKGGVGKTTCSSILAICLA-SVRSSVLIISTDPAHNLSDAF 65

Query: 254 HQKFSKVPTKVKRFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGI 433
            Q+F+K PT V+ F NLFAME+DP V   ++        ++ M    G+  ++  A PGI
Sbjct: 66  QQRFTKSPTLVQGFSNLFAMEVDPTVETDDM------AGTDGM---DGLFSDLANAIPGI 116

Query: 434 DEAMSYA 454
           DEAMS+A
Sbjct: 117 DEAMSFA 123



 Score = 52.4 bits (120), Expect = 1e-07
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = +3

Query: 135 GKAELGKLRAVAVSQFSWSKVRESVLIISTDPAHNISDAFTRNFLKYQQRLKGLT 299
           GK  +GK    ++     + VR SVLIISTDPAHN+SDAF + F K    ++G +
Sbjct: 26  GKGGVGKTTCSSILAICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTLVQGFS 80


>At5g60730.1 68418.m07620 anion-transporting ATPase family protein
           low similarity to SP|O43681 Arsenical pump-driving
           ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase)
           (Arsenical resistance ATPase) (Arsenite-transporting
           ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam
           profile PF02374: Anion-transporting ATPase
          Length = 391

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 18/58 (31%), Positives = 34/58 (58%)
 Frame = +3

Query: 90  KMLSIKSR*GGFSLEGKAELGKLRAVAVSQFSWSKVRESVLIISTDPAHNISDAFTRN 263
           +M+S+  R   + L GK  +GK    A     ++      +++STDPAH++SD+F+++
Sbjct: 62  EMVSVNQR-KYYLLGGKGGVGKTSCAASLAVKFASHGHPTIVVSTDPAHSLSDSFSQD 118


>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
           similar to SP|O43681 Arsenical pump-driving ATPase (EC
           3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
           resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
           (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
           Anion-transporting ATPase; contains non-consensus GA
           donor splice site at intron 5
          Length = 411

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 123 FSLEGKAELGKLRAVAVSQFSWSKVRESVLIISTDPAHNISDAFTRN 263
           + L GK  +GK    A     ++      L++STDPAH++SD+F ++
Sbjct: 90  YMLGGKGGVGKTSCAASLAVRFANNGHPTLVVSTDPAHSLSDSFAQD 136


>At2g02780.1 68415.m00221 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 753

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 266 SKVPTKVKRFDNLFAMEIDPNVGLTELPEEYFEGES-EAMRLDKGVM 403
           SK+P ++K+ +NL ++++  N     +PE  F   S + + LD+ ++
Sbjct: 214 SKIPEQIKKLNNLQSLDLSSNEFTGSIPEFLFSIPSLQILSLDQNLL 260


>At1g72110.1 68414.m08335 expressed protein
          Length = 479

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 272 VPTKVKRFDNLFAMEIDPNVGLTELPEEYFEGESEAMRL 388
           +PTK+   +++   +IDPN+   E P+E+ E  +  M L
Sbjct: 77  IPTKINVEEHVIVPDIDPNI---ENPDEFLEDYTSNMAL 112


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,575,450
Number of Sequences: 28952
Number of extensions: 152315
Number of successful extensions: 399
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)