Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1140
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   0.90 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   1.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   6.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   6.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.4  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 369 LTGLLPAVLPNVCVKCTDADK 431
           L  +LP  L   C KCTD  K
Sbjct: 62  LKRVLPDALKTSCAKCTDKQK 82


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 369 LTGLLPAVLPNVCVKCTDADKPRTSEI 449
           L  +LP  L + C KC++  K  T ++
Sbjct: 58  LKRVLPDALKSDCAKCSEKQKEMTKKV 84


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 327 HEACDLGRGMA---ALGLTGLLPAVLPNVCVKCTDADKPRTS 443
           + AC L +G      + L  +LP  L   C KCT  +K RT+
Sbjct: 43  YAACLLSKGPCPPQGVDLKRVLPEALQTNCAKCT--EKQRTA 82


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +3

Query: 369 LTGLLPAVLPNVCVKCTDADKPRTSEI----AMNSKFPTNRLILSY 494
           L  +LP  L   C KC++  K +  +I     +N +   N+L+  Y
Sbjct: 73  LKKILPDALVTNCSKCSEVQKKQAGKILTFVLLNYRNEWNQLVAKY 118


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 381 LPAVLPNVCVKCTDADK 431
           +P  L N C KC D  K
Sbjct: 62  IPDALKNECAKCNDKHK 78


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 381 LPAVLPNVCVKCTDADK 431
           +P  L N C KC +  K
Sbjct: 64  IPEALQNECAKCNEKHK 80


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 381 LPAVLPNVCVKCTDADKPRTSEI 449
           LP  L + C KCT+  K  + +I
Sbjct: 67  LPDALHSGCSKCTEKQKEGSRKI 89


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 381 LPAVLPNVCVKCTDADK 431
           +P  L N C KC +  K
Sbjct: 63  IPDALQNECAKCNEKHK 79


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 381 LPAVLPNVCVKCTDADK 431
           +P  L N C KC +  K
Sbjct: 64  IPEALQNGCAKCNEKHK 80


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 381 LPAVLPNVCVKCTDADK 431
           +P  L N C KC +  K
Sbjct: 64  IPEALQNGCAKCNEKHK 80


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 353 NGSSGPDRPSSCRTSERM 406
           N  +GP RP++C    R+
Sbjct: 133 NSLTGPVRPAACTPDSRV 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,073
Number of Sequences: 336
Number of extensions: 2566
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)