Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1140
(623 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ228773-1|ABB54726.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
DQ228772-1|ABB54725.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
DQ228771-1|ABB54724.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
DQ228769-1|ABB54722.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
DQ228768-1|ABB54721.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
DQ228767-1|ABB54720.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
DQ228766-1|ABB54719.1| 839|Drosophila melanogaster Argonaute-2 ... 29 6.8
BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p pro... 29 6.8
AY094751-1|AAM11104.1| 694|Drosophila melanogaster GM07030p pro... 29 6.8
AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC... 29 6.8
AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB... 29 6.8
DQ228770-1|ABB54723.1| 839|Drosophila melanogaster Argonaute-2 ... 28 8.9
>DQ228773-1|ABB54726.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>DQ228772-1|ABB54725.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>DQ228771-1|ABB54724.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>DQ228769-1|ABB54722.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>DQ228768-1|ABB54721.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>DQ228767-1|ABB54720.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>DQ228766-1|ABB54719.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 339
>BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p
protein.
Length = 1214
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 670 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 714
>AY094751-1|AAM11104.1| 694|Drosophila melanogaster GM07030p
protein.
Length = 694
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 150 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 194
>AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC,
isoform C protein.
Length = 1217
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 673 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 717
>AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB,
isoform B protein.
Length = 1214
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELCA 33
E++ K + SYF S+ K+ +LHC+N + + KS ELC+
Sbjct: 670 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELCS 714
>DQ228770-1|ABB54723.1| 839|Drosophila melanogaster Argonaute-2
protein.
Length = 839
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 176 EYNTKLINT*SYFESKYLNEKYVRLHCINCLAYVNDGKSFECNAELC 36
E++ K + SYF S+ K+ +LHC+N + + KS ELC
Sbjct: 295 EHDGKKVTIASYFHSRNYPLKFPQLHCLNVGSSI---KSILLPIELC 338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,406,217
Number of Sequences: 53049
Number of extensions: 468930
Number of successful extensions: 1181
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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