Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1140
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    24   1.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   1.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.2  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   5.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   5.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   5.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   9.8  

>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +3

Query: 318 KDLHEACDLGRGMA-ALG--LTGLLPAVLPNVCVKCT 419
           K LH  C L RG    +G  +  LLP VL N C +CT
Sbjct: 35  KQLH--CILDRGHCDVIGKKIKELLPEVLNNHCNRCT 69


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 617 CPTRNTLTSVMCLLFR 570
           CPTRN    + CL +R
Sbjct: 261 CPTRNVKEMIRCLRYR 276


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 617 CPTRNTLTSVMCLLFR 570
           CPTRN    + CL +R
Sbjct: 132 CPTRNVKEMIRCLRYR 147


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 617 CPTRNTLTSVMCLLFR 570
           CPTRN    + CL +R
Sbjct: 261 CPTRNVKEMIRCLRYR 276


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 342 LGRGMAALGLTGLLPAVLPNVCVKCTDA 425
           +   + A  LTG  P +LP  C+   +A
Sbjct: 467 MAASVVAAALTGTYPTLLPQWCLPPREA 494


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 369 LTGLLPAVLPNVCVKCTDADK 431
           L  +LP  L   C KCTD  +
Sbjct: 64  LKRVLPDALATDCKKCTDKQR 84


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 369 LTGLLPAVLPNVCVKCTDADK 431
           L  +LP  L   C KCTD  +
Sbjct: 64  LKRVLPDALATDCKKCTDKQR 84


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 369 LTGLLPAVLPNVCVKCTDADK 431
           L  +LP  L   C KCTD  +
Sbjct: 64  LKRVLPDALATDCKKCTDKQR 84


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 507 VVSTDRIISACLLGTLNS*LSPMSS 433
           ++S  R +S C LGT +S  S  SS
Sbjct: 166 LLSKRRSVSECSLGTASSTSSTASS 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,674
Number of Sequences: 438
Number of extensions: 2905
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)