Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1136
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 172 2e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 172 2e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 172 2e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 172 2e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 172 2e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 172 2e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 172 2e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 166 2e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 164 7e-41
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 96 2e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 93 2e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 60 2e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 3e-05
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.36
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 30 1.5
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 30 1.5
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 30 1.5
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 2.5
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 29 3.4
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 29 3.4
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 29 4.4
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 5.9
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 5.9
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 5.9
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 28 5.9
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 28 7.8
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 28 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 166 bits (403), Expect = 2e-41
Identities = 75/81 (92%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 166 bits (403), Expect = 2e-41
Identities = 75/81 (92%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 166 bits (403), Expect = 2e-41
Identities = 75/81 (92%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 250 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 309
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 310 QQMWISKQEYDESGPSIVHRKCF 332
Score = 167 bits (405), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 168 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 227
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 228 SAGIHETSYNSIMKCDIDIRK 248
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 280 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 339
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 340 QQMWISKQEYDESGPSIVHRKCF 362
Score = 167 bits (405), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 198 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 257
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 258 SAGIHETSYNSIMKCDIDIRK 278
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 9e-42
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 166 bits (403), Expect = 2e-41
Identities = 75/81 (92%), Positives = 80/81 (98%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
+ GIHET+YNSIMKCD+DIRK
Sbjct: 272 SAGIHETSYNSIMKCDIDIRK 292
Score = 166 bits (403), Expect = 2e-41
Identities = 80/83 (96%), Positives = 80/83 (96%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 164 bits (398), Expect = 7e-41
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L NTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 155 bits (375), Expect = 4e-38
Identities = 71/81 (87%), Positives = 74/81 (91%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME
Sbjct: 211 DIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGME 270
Query: 183 ACGIHETTYNSIMKCDVDIRK 245
GIHETTY SIMKCDVDIRK
Sbjct: 271 GAGIHETTYQSIMKCDVDIRK 291
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 417
L N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 418 STFQQMWISKQEYDESGPSIVHRKC 492
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 90 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKT 248
Y P+G G ER + PE LF +L E + + S D+DIR T
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPT 350
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 427 QQMWISKQEYDESGPSIVHRKCF 495
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 74.1 bits (174), Expect = 9e-14
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
++KE CY+ALD T ++S++ SY LPD I I N FR PE LF+P +G E
Sbjct: 215 EMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTE 269
Query: 183 ACGIHETTYNSIMKCDVDIRKT 248
G+ SIMKCDVD+R+T
Sbjct: 270 WPGMAHVVNQSIMKCDVDLRQT 291
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/88 (43%), Positives = 53/88 (60%)
Frame = +3
Query: 6 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEA 185
+KEKLCY+A D EQE A ++ L + Y LPDG+VI +G ERF PE LFQP + +E
Sbjct: 216 MKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEK 275
Query: 186 CGIHETTYNSIMKCDVDIRKTCTQHRIV 269
G+ E + I D+D R +H ++
Sbjct: 276 AGLSELLFGCIQASDIDTRLDFYKHIVL 303
Score = 72.1 bits (169), Expect = 4e-13
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 13/91 (14%)
Frame = +1
Query: 235 TSVRLVRNTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKY 381
T + ++ VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+
Sbjct: 293 TRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKH 352
Query: 382 SVWIGGSILASL--STFQQMWISKQEYDESG 468
V++GG++LA+L Q W+SK+EY+E G
Sbjct: 353 MVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERK 378
L N VLSGG+TM+ A ++Q+++ L+ P + +++I+ ++
Sbjct: 322 LYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQR 381
Query: 379 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 477
Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 382 YAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +3
Query: 6 IKEKLCYVALDFEQEMATA-ASSSSLEKSYELPDGQV-----ITIGNERFRCPEALFQPS 167
IKEK CYV D +E ++ ++Y+ + + +G ERF PE F P
Sbjct: 234 IKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPE 293
Query: 168 FLGME-ACGIHETTYNSIMKCDVDIRK 245
F E I +T I +C +D+R+
Sbjct: 294 FCNPEFTTPISDTIDTLIQQCPIDVRR 320
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/69 (36%), Positives = 46/69 (66%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 426
L RN L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 427 QQMWISKQE 453
+ IS Q+
Sbjct: 531 EDSCISLQQ 539
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +3
Query: 12 EKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGME 182
E+ YV D+++E + + SL+ P Q I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 183 ACGIHETTYNSIMKCDVDIRKT 248
G+H+ + +I++C +D R+T
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRT 470
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------------I 116
+ KE LC+V+ +F++ M A + ++ K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 117 TIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKTCTQHRIV 269
+G ERF PE LF PS + ++ CG+ E SI +C +R ++ IV
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIV 314
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 417
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 418 STFQQMWISKQEYDESGPSIVHRKCF*T 501
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------------I 116
+ KE LC+V+ +F++ M A + ++ K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 117 TIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKTCTQHRIV 269
+G ERF PE LF PS + ++ CG+ E SI +C +R ++ IV
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIV 314
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +1
Query: 247 LVRNTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 417
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 418 STFQQMWISKQEYDESGPSIVHRKCF*T 501
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Frame = +1
Query: 244 RLVRNTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIG 396
+L N +L+GG + PG+ R+++EI + + KI +I E K + W+G
Sbjct: 208 KLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLG 267
Query: 397 GSILASL-STFQQMWISKQEY 456
S+L SL T ++ ++ +E+
Sbjct: 268 ASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 390 PYGVLPLWRSNDLYLHCRWGESCD 319
P VLPL NDL +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 390 PYGVLPLWRSNDLYLHCRWGESCD 319
P VLPL NDL +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 390 PYGVLPLWRSNDLYLHCRWGESCD 319
P VLPL NDL +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 46 RRWPPLHPAAPSRSLTNFPTVRSSPSE 126
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +1
Query: 100 PTVRSSPSETKDSVAQRLSSNPRSW----VWKLAASTRQHITPS*SATWTSVRLVRNTVL 267
P+ +SP+ VA+ + +W VW ++ R+ IT +W +R TVL
Sbjct: 1343 PSNDTSPAHLASEVAENENDTDNAWTEHDVWAISLRERRIITTIIGYSWLPTSAIRGTVL 1402
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +1
Query: 100 PTVRSSPSETKDSVAQRLSSNPRSW----VWKLAASTRQHITPS*SATWTSVRLVRNTVL 267
P+ +SP+ VA+ + +W VW ++ R+ IT +W +R TVL
Sbjct: 952 PSNDTSPAHLASEVAENENDTDNAWTEHDVWAISLRERRIITTIIGYSWLPTSAIRGTVL 1011
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 4 TSRRSCATSLLTSSRRWPPLHPAAPS 81
+SRRS S+ TS++ WP +APS
Sbjct: 80 SSRRSSLASVSTSTKNWPSKSSSAPS 105
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 69 SSSLEKSYEL-PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 245
+SS+ Y L P Q I ++ ++ S A H +T NS + IR
Sbjct: 393 ASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLP----IRN 448
Query: 246 TCT-QHRIVRWYHHVPWNRR 302
T T QH + H PWN++
Sbjct: 449 TMTNQHHLGHTSQHSPWNKQ 468
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 69 SSSLEKSYEL-PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 245
+SS+ Y L P Q I ++ ++ S A H +T NS + IR
Sbjct: 393 ASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLP----IRN 448
Query: 246 TCT-QHRIVRWYHHVPWNRR 302
T T QH + H PWN++
Sbjct: 449 TMTNQHHLGHTSQHSPWNKQ 468
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 69 SSSLEKSYEL-PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 245
+SS+ Y L P Q I ++ ++ S A H +T NS + IR
Sbjct: 393 ASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLP----IRN 448
Query: 246 TCT-QHRIVRWYHHVPWNRR 302
T T QH + H PWN++
Sbjct: 449 TMTNQHHLGHTSQHSPWNKQ 468
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 69 SSSLEKSYEL-PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 245
+SS+ Y L P Q I ++ ++ S A H +T NS + IR
Sbjct: 297 ASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLP----IRN 352
Query: 246 TCT-QHRIVRWYHHVPWNRR 302
T T QH + H PWN++
Sbjct: 353 TMTNQHHLGHTSQHSPWNKQ 372
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 143 PRGSLPTLVLGYGSLRHPRDNI*LHHEVRRGHP 241
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 143 PRGSLPTLVLGYGSLRHPRDNI*LHHEVRRGHP 241
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,418,735
Number of Sequences: 27780
Number of extensions: 392645
Number of successful extensions: 1301
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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