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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1132
         (607 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383...   105   2e-23
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761...   100   8e-22
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403           66   2e-11
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421...    52   5e-07
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708...    30   1.2  
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660...    30   1.6  
06_02_0155 + 12380452-12381012                                         29   2.2  
06_03_1259 - 28800954-28802468                                         29   2.9  
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041...    29   2.9  
04_03_0367 + 14970511-14970697,14970862-14970869                       29   3.8  
11_06_0718 - 26592786-26593856,26597401-26597451,26597977-265984...    28   5.0  
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936...    28   5.0  
07_03_1649 - 28385289-28385358,28387039-28387877                       28   5.0  
03_02_0797 - 11296426-11297258,11297745-11297901                       28   5.0  
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496...    28   6.6  
06_03_0635 - 22971502-22973840,22974112-22974403,22974639-229751...    27   8.7  
03_05_0815 + 27917516-27917767,27918024-27918110,27918281-279183...    27   8.7  
01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959     27   8.7  

>02_05_0689 -
           30937621-30937665,30938143-30938208,30938303-30938356,
           30938489-30938560,30938648-30938743,30939883-30939960,
           30940485-30940564,30940662-30941343
          Length = 390

 Score =  105 bits (253), Expect = 2e-23
 Identities = 45/79 (56%), Positives = 63/79 (79%)
 Frame = +1

Query: 25  GPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKD 204
           GP+V+EM+TYRY GHSMSDPG++YRTRDE+  VRQ RDPI   ++ IL H+L T  +LKD
Sbjct: 278 GPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKD 337

Query: 205 IDAKVRKEVDEATKQSKRN 261
           ++ ++RKEVD+A  ++K +
Sbjct: 338 MEKEIRKEVDDAIAKAKES 356


>06_01_0981 +
           7613381-7614086,7614203-7614282,7614883-7614960,
           7615166-7615261,7615370-7615441,7615676-7615729,
           7615819-7615884,7616291-7616335
          Length = 398

 Score =  100 bits (240), Expect = 8e-22
 Identities = 40/79 (50%), Positives = 61/79 (77%)
 Frame = +1

Query: 25  GPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKD 204
           GP+++EM+TYRY GHSMSDPG++YRTRDE+  +RQ RDPI   ++ +L H+  T  +LKD
Sbjct: 286 GPIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKD 345

Query: 205 IDAKVRKEVDEATKQSKRN 261
           ++ ++RK+VD A  ++K +
Sbjct: 346 MEKEIRKQVDTAIAKAKES 364


>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
          Length = 425

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 34/82 (41%), Positives = 48/82 (58%)
 Frame = +1

Query: 1   IEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHEL 180
           IE    G+GP ++E ETYR+ GHS++DP    R  DE       RDPIT+ K+ I+   L
Sbjct: 300 IERARRGEGPTLVECETYRFRGHSLADP-DELRRPDEKSHY-AARDPITALKKYIIEQNL 357

Query: 181 VTPDQLKDIDAKVRKEVDEATK 246
            T  +LK I+ K+   V+EA +
Sbjct: 358 ATESELKSIEKKIDDVVEEAVE 379


>12_01_0535 +
           4208410-4208661,4209529-4209627,4210125-4210265,
           4210378-4210560,4210664-4210821,4210905-4211004,
           4211085-4211196,4211241-4211419,4211489-4211674,
           4211762-4211929
          Length = 525

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 26/83 (31%), Positives = 46/83 (55%)
 Frame = +1

Query: 28  PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
           P+++E  TYR   HS SD  T YR  DE++  R  RDPI+ +++ +  +     +   ++
Sbjct: 404 PILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESEL 463

Query: 208 DAKVRKEVDEATKQSKRNQKSVL 276
              VR+E+ +A + ++R  K  L
Sbjct: 464 RNNVRQELLKAIQVAERMPKPPL 486


>09_04_0744 -
           19867604-19867686,19868075-19869872,19870777-19870801,
           19872313-19872710
          Length = 767

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 159 LLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRV 58
           LL+  DG+SG+PHL +L    +++ G +  +  +
Sbjct: 691 LLDSKDGLSGVPHLTNLNELLVKKCGEKENLMEI 724


>03_02_1023 +
           13265179-13265330,13265526-13265637,13265752-13266048,
           13266361-13266623,13267637-13267847,13268420-13268590,
           13268671-13268748,13269275-13269520,13269763-13271868,
           13272122-13273904,13274113-13274216,13274752-13275108,
           13275210-13275328,13276175-13276436,13276669-13276893,
           13277075-13277214,13278087-13278159,13278431-13278532,
           13278647-13279018,13279183-13279230,13279516-13279900,
           13280440-13280558
          Length = 2574

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 112 VQEVRQ-TRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKS 282
           V E+R   R P+T     ILNH  +   Q+ D+D  +R+    A K+    +KS   S
Sbjct: 96  VGEIRLGLRRPLTQLGFTILNHGPILQLQISDLDIVLRQPAKSAKKKKPPPRKSTSTS 153


>06_02_0155 + 12380452-12381012
          Length = 186

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 139 GLWSASPPAPRLSSDTTCRGPTSNDQ 62
           G   A+PPAP  S DT  R PT  D+
Sbjct: 50  GNGGAAPPAPATSPDTEVRAPTYGDK 75


>06_03_1259 - 28800954-28802468
          Length = 504

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -2

Query: 162 LLLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRVTVRLHLHHQRTFPCVAVLD 1
           +L++ +DG SG  + L+  S+     G R   T  TVRLH  HQ   P  ++ D
Sbjct: 54  ILIDEADGASGGANDLYDASQLY--LGARCLATAPTVRLHKPHQAPRPVASLPD 105


>03_06_0296 +
           32901696-32901892,32901989-32902232,32903992-32904112,
           32904219-32904406
          Length = 249

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 36  DGDGDVPLLWSFDVGPRHVVSDE 104
           D DG VP  W  D   R VVSD+
Sbjct: 148 DADGSVPFYWGVDPDSRLVVSDD 170


>04_03_0367 + 14970511-14970697,14970862-14970869
          Length = 64

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 48  DVPLLWSFDVGPRHVVSDERRGAGGEADQR 137
           D+PL W   V P      E RGAGG+ ++R
Sbjct: 11  DLPLAWPGRVDPPLAGLGEGRGAGGDEEER 40


>11_06_0718 -
           26592786-26593856,26597401-26597451,26597977-26598423,
           26599748-26599815,26599965-26600052
          Length = 574

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = +1

Query: 97  RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVL 276
           R  D+ + V+ T+  +   +  +   E+   D   D+D   R+ +DE   Q K     V 
Sbjct: 465 RREDDHKGVKNTKVAVQLLQRNM--DEIRRSDAWTDLDVGTRRRIDE---QVKEIADHVE 519

Query: 277 KSXXPIYTTRTWNPSSVASTRLPRSNTLRS 366
           K   P Y   +W    V+S  + R+NT+ S
Sbjct: 520 KGEGPAY-VNSW----VSSQEMQRANTMGS 544


>08_02_0274 -
           15192670-15192983,15193110-15193200,15193295-15193603,
           15193859-15193944,15196034-15196088,15196689-15196757,
           15197027-15197074,15198090-15198203,15198464-15198526,
           15199236-15199427,15199519-15199643,15199723-15199779,
           15200209-15200332,15200478-15200543,15200656-15200738,
           15200916-15201036,15201663-15201773,15201841-15201936,
           15202032-15202107,15202878-15203016,15203283-15203346,
           15203454-15203527,15203845-15203923,15204473-15204547
          Length = 876

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 97  RTRDEVQEVRQTRDPITSFKEKILN-HELVTPDQLKDIDAKVR 222
           RTRDE+ +V++ +D +T   +K+ +  E   PD   +I   V+
Sbjct: 546 RTRDELMDVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVK 588


>07_03_1649 - 28385289-28385358,28387039-28387877
          Length = 302

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -2

Query: 120 LLHLVSRPIRRAGVRHRMT-RVT-VRLHL 40
           ++HLVS P+  A V HR T R++ V LHL
Sbjct: 43  VVHLVSTPVNLAAVAHRRTDRISLVELHL 71


>03_02_0797 - 11296426-11297258,11297745-11297901
          Length = 329

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -1

Query: 139 GLWSASPPAPRLSSDTTCRGPTSNDQSNGTSPS-PSPKD 26
           G  S   PAP LSS T      S D   G  PS P+  D
Sbjct: 206 GAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSWPTQAD 244


>06_02_0200 -
           12946139-12946282,12947636-12947842,12949506-12949629,
           12950167-12950369,12950922-12951620,12951723-12951784,
           12952395-12952404,12954905-12957631
          Length = 1391

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
 Frame = -1

Query: 136 LWSASPPAPRLSSDTTCRGPTSNDQSNGT--------SPSPSPKDLSLRCS 8
           LWS SPP+  +++            ++GT         PSPSP+  SL C+
Sbjct: 9   LWSPSPPSHHITAAAATPAALFTGAADGTILHWPLLPPPSPSPRPSSLLCA 59


>06_03_0635 -
           22971502-22973840,22974112-22974403,22974639-22975162,
           22975314-22975583,22976393-22977124,22977226-22977310
          Length = 1413

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 78  GPRHVVSDERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQG 218
           G    V   R G GG+   RP    + +    RA  AR    +RRQG
Sbjct: 75  GAEPAVRRVRGGVGGQQGARPQRRRRQDGAAVRAGDARQRPWHRRQG 121


>03_05_0815 +
           27917516-27917767,27918024-27918110,27918281-27918394,
           27919644-27919835,27919925-27921677,27921771-27922708,
           27923587-27923859
          Length = 1202

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 40  EMETYRYSGHS-MSDPGTSYRTRDEVQEVRQTRDPITS 150
           E ET + S HS + DP T Y  R+E+  V Q  D  TS
Sbjct: 452 ERETQQLSEHSQIEDPDTFYH-REELSLVEQKEDHTTS 488


>01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959
          Length = 220

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +1

Query: 64  GHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEAT 243
           G + + PGT    ++++Q++  T   +       +  E  TPDQ KD DA +++  D+  
Sbjct: 79  GMAKASPGT---VKEKIQKLGLT--DVNEGNVVPIEPEKFTPDQKKDFDAMMQQARDQFL 133

Query: 244 KQSKRNQKSVL 276
               + +K  L
Sbjct: 134 NSFMQTRKGTL 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,559,599
Number of Sequences: 37544
Number of extensions: 323017
Number of successful extensions: 1441
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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