Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1132
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 105 2e-23
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 100 8e-22
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 66 2e-11
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 52 5e-07
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 30 1.2
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 30 1.6
06_02_0155 + 12380452-12381012 29 2.2
06_03_1259 - 28800954-28802468 29 2.9
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 2.9
04_03_0367 + 14970511-14970697,14970862-14970869 29 3.8
11_06_0718 - 26592786-26593856,26597401-26597451,26597977-265984... 28 5.0
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936... 28 5.0
07_03_1649 - 28385289-28385358,28387039-28387877 28 5.0
03_02_0797 - 11296426-11297258,11297745-11297901 28 5.0
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496... 28 6.6
06_03_0635 - 22971502-22973840,22974112-22974403,22974639-229751... 27 8.7
03_05_0815 + 27917516-27917767,27918024-27918110,27918281-279183... 27 8.7
01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959 27 8.7
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 105 bits (253), Expect = 2e-23
Identities = 45/79 (56%), Positives = 63/79 (79%)
Frame = +1
Query: 25 GPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKD 204
GP+V+EM+TYRY GHSMSDPG++YRTRDE+ VRQ RDPI ++ IL H+L T +LKD
Sbjct: 278 GPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKD 337
Query: 205 IDAKVRKEVDEATKQSKRN 261
++ ++RKEVD+A ++K +
Sbjct: 338 MEKEIRKEVDDAIAKAKES 356
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 100 bits (240), Expect = 8e-22
Identities = 40/79 (50%), Positives = 61/79 (77%)
Frame = +1
Query: 25 GPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKD 204
GP+++EM+TYRY GHSMSDPG++YRTRDE+ +RQ RDPI ++ +L H+ T +LKD
Sbjct: 286 GPIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKD 345
Query: 205 IDAKVRKEVDEATKQSKRN 261
++ ++RK+VD A ++K +
Sbjct: 346 MEKEIRKQVDTAIAKAKES 364
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 1 IEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHEL 180
IE G+GP ++E ETYR+ GHS++DP R DE RDPIT+ K+ I+ L
Sbjct: 300 IERARRGEGPTLVECETYRFRGHSLADP-DELRRPDEKSHY-AARDPITALKKYIIEQNL 357
Query: 181 VTPDQLKDIDAKVRKEVDEATK 246
T +LK I+ K+ V+EA +
Sbjct: 358 ATESELKSIEKKIDDVVEEAVE 379
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++E TYR HS SD T YR DE++ R RDPI+ +++ + + + ++
Sbjct: 404 PILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESEL 463
Query: 208 DAKVRKEVDEATKQSKRNQKSVL 276
VR+E+ +A + ++R K L
Sbjct: 464 RNNVRQELLKAIQVAERMPKPPL 486
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 159 LLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRV 58
LL+ DG+SG+PHL +L +++ G + + +
Sbjct: 691 LLDSKDGLSGVPHLTNLNELLVKKCGEKENLMEI 724
>03_02_1023 +
13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 112 VQEVRQ-TRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKS 282
V E+R R P+T ILNH + Q+ D+D +R+ A K+ +KS S
Sbjct: 96 VGEIRLGLRRPLTQLGFTILNHGPILQLQISDLDIVLRQPAKSAKKKKPPPRKSTSTS 153
>06_02_0155 + 12380452-12381012
Length = 186
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 139 GLWSASPPAPRLSSDTTCRGPTSNDQ 62
G A+PPAP S DT R PT D+
Sbjct: 50 GNGGAAPPAPATSPDTEVRAPTYGDK 75
>06_03_1259 - 28800954-28802468
Length = 504
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 162 LLLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRVTVRLHLHHQRTFPCVAVLD 1
+L++ +DG SG + L+ S+ G R T TVRLH HQ P ++ D
Sbjct: 54 ILIDEADGASGGANDLYDASQLY--LGARCLATAPTVRLHKPHQAPRPVASLPD 105
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 36 DGDGDVPLLWSFDVGPRHVVSDE 104
D DG VP W D R VVSD+
Sbjct: 148 DADGSVPFYWGVDPDSRLVVSDD 170
>04_03_0367 + 14970511-14970697,14970862-14970869
Length = 64
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 48 DVPLLWSFDVGPRHVVSDERRGAGGEADQR 137
D+PL W V P E RGAGG+ ++R
Sbjct: 11 DLPLAWPGRVDPPLAGLGEGRGAGGDEEER 40
>11_06_0718 -
26592786-26593856,26597401-26597451,26597977-26598423,
26599748-26599815,26599965-26600052
Length = 574
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = +1
Query: 97 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVL 276
R D+ + V+ T+ + + + E+ D D+D R+ +DE Q K V
Sbjct: 465 RREDDHKGVKNTKVAVQLLQRNM--DEIRRSDAWTDLDVGTRRRIDE---QVKEIADHVE 519
Query: 277 KSXXPIYTTRTWNPSSVASTRLPRSNTLRS 366
K P Y +W V+S + R+NT+ S
Sbjct: 520 KGEGPAY-VNSW----VSSQEMQRANTMGS 544
>08_02_0274 -
15192670-15192983,15193110-15193200,15193295-15193603,
15193859-15193944,15196034-15196088,15196689-15196757,
15197027-15197074,15198090-15198203,15198464-15198526,
15199236-15199427,15199519-15199643,15199723-15199779,
15200209-15200332,15200478-15200543,15200656-15200738,
15200916-15201036,15201663-15201773,15201841-15201936,
15202032-15202107,15202878-15203016,15203283-15203346,
15203454-15203527,15203845-15203923,15204473-15204547
Length = 876
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 97 RTRDEVQEVRQTRDPITSFKEKILN-HELVTPDQLKDIDAKVR 222
RTRDE+ +V++ +D +T +K+ + E PD +I V+
Sbjct: 546 RTRDELMDVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVK 588
>07_03_1649 - 28385289-28385358,28387039-28387877
Length = 302
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -2
Query: 120 LLHLVSRPIRRAGVRHRMT-RVT-VRLHL 40
++HLVS P+ A V HR T R++ V LHL
Sbjct: 43 VVHLVSTPVNLAAVAHRRTDRISLVELHL 71
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 139 GLWSASPPAPRLSSDTTCRGPTSNDQSNGTSPS-PSPKD 26
G S PAP LSS T S D G PS P+ D
Sbjct: 206 GAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSWPTQAD 244
>06_02_0200 -
12946139-12946282,12947636-12947842,12949506-12949629,
12950167-12950369,12950922-12951620,12951723-12951784,
12952395-12952404,12954905-12957631
Length = 1391
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Frame = -1
Query: 136 LWSASPPAPRLSSDTTCRGPTSNDQSNGT--------SPSPSPKDLSLRCS 8
LWS SPP+ +++ ++GT PSPSP+ SL C+
Sbjct: 9 LWSPSPPSHHITAAAATPAALFTGAADGTILHWPLLPPPSPSPRPSSLLCA 59
>06_03_0635 -
22971502-22973840,22974112-22974403,22974639-22975162,
22975314-22975583,22976393-22977124,22977226-22977310
Length = 1413
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 78 GPRHVVSDERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQG 218
G V R G GG+ RP + + RA AR +RRQG
Sbjct: 75 GAEPAVRRVRGGVGGQQGARPQRRRRQDGAAVRAGDARQRPWHRRQG 121
>03_05_0815 +
27917516-27917767,27918024-27918110,27918281-27918394,
27919644-27919835,27919925-27921677,27921771-27922708,
27923587-27923859
Length = 1202
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 40 EMETYRYSGHS-MSDPGTSYRTRDEVQEVRQTRDPITS 150
E ET + S HS + DP T Y R+E+ V Q D TS
Sbjct: 452 ERETQQLSEHSQIEDPDTFYH-REELSLVEQKEDHTTS 488
>01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959
Length = 220
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 64 GHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEAT 243
G + + PGT ++++Q++ T + + E TPDQ KD DA +++ D+
Sbjct: 79 GMAKASPGT---VKEKIQKLGLT--DVNEGNVVPIEPEKFTPDQKKDFDAMMQQARDQFL 133
Query: 244 KQSKRNQKSVL 276
+ +K L
Sbjct: 134 NSFMQTRKGTL 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,559,599
Number of Sequences: 37544
Number of extensions: 323017
Number of successful extensions: 1441
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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