Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1132
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 132 2e-31
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 48 7e-06
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 32 0.28
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF067216-9|AAC17520.2| 646|Caenorhabditis elegans Hypothetical ... 29 1.9
AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical ... 28 4.5
AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical ... 28 4.5
AC090999-12|ABD63206.1| 257|Caenorhabditis elegans Hypothetical... 28 4.5
Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical p... 28 5.9
Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical p... 28 5.9
U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical... 28 5.9
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 28 5.9
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 27 7.9
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 27 7.9
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 27 7.9
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 132 bits (319), Expect = 2e-31
Identities = 58/81 (71%), Positives = 70/81 (86%)
Frame = +1
Query: 4 EYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELV 183
EYC++GKGPL+MEM TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++I+ L
Sbjct: 282 EYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLA 341
Query: 184 TPDQLKDIDAKVRKEVDEATK 246
T ++LK ID +VRKEVDEA K
Sbjct: 342 TEEELKAIDKEVRKEVDEALK 362
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 132 bits (319), Expect = 2e-31
Identities = 58/81 (71%), Positives = 70/81 (86%)
Frame = +1
Query: 4 EYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELV 183
EYC++GKGPL+MEM TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++I+ L
Sbjct: 265 EYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLA 324
Query: 184 TPDQLKDIDAKVRKEVDEATK 246
T ++LK ID +VRKEVDEA K
Sbjct: 325 TEEELKAIDKEVRKEVDEALK 345
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++E TYR HS SD T+YR+ DEVQ PIT FK+ I ++ +
Sbjct: 307 PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEW 366
Query: 208 DAKVRKEVDEATKQSKRNQKS 270
+V+K V +++ +K+
Sbjct: 367 QKEVKKRVLTEFAAAEKRKKA 387
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++E TYR HS SD T+YR+ DEVQ PIT FK+ I ++ +
Sbjct: 306 PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEW 365
Query: 208 DAKVRKEVDEATKQSKRNQKS 270
+V+K V +++ +K+
Sbjct: 366 QKEVKKRVLTEFAAAEKRKKA 386
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/79 (21%), Positives = 40/79 (50%)
Frame = +1
Query: 22 KGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLK 201
K +++++ YR GH+ D + Q ++QT+ + ++EKILN + +K
Sbjct: 502 KKDVIVDLVCYRRHGHNELDE-PMFTQPLMYQRIKQTKTALEKYQEKILNEGVANEQYVK 560
Query: 202 DIDAKVRKEVDEATKQSKR 258
+ K +++A + +++
Sbjct: 561 EELTKYGSILEDAYENAQK 579
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 99 DERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 236
D GG + R HHF Q + A++ RSA G+ RQ RR
Sbjct: 318 DSSLPTGGGSAIRVHHFKQNSRITPIAQNRRSAAGFDRQQIQEMRR 363
>AF067216-9|AAC17520.2| 646|Caenorhabditis elegans Hypothetical
protein C35E7.4 protein.
Length = 646
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 82 PGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQ-SKR 258
P + + E Q I K + H L+ DQLK K RK V E + KR
Sbjct: 162 PSKILKENERKHEHVQMLSMIEQLKFNLNTHNLILNDQLK----KKRKRVSELEQALRKR 217
Query: 259 NQKSVLKSXXPIY 297
N KS L + +Y
Sbjct: 218 NMKSELATDFDLY 230
>AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical
protein F37C4.2 protein.
Length = 686
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 258 PFRLFSGLVYFFTYLGVDILELIWRDELVIQDLLLERSDGVSGLPHLLH 112
PF L +GLV +G L L+ D LV+ + +L +S +L+H
Sbjct: 279 PFTLPAGLVRPLVTMGTGFLMLLSEDNLVLSNRILTYIGDISFSLYLIH 327
>AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical
protein M01D1.9 protein.
Length = 286
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 294 IYYK-NLEPFVRGIHPAAPLKHLEVQPRNH 380
+Y+K ++PF + I+ P KHL++ P H
Sbjct: 147 VYWKFEMDPFFKVINAFLPTKHLKIHPTFH 176
>AC090999-12|ABD63206.1| 257|Caenorhabditis elegans Hypothetical
protein Y82E9BR.23 protein.
Length = 257
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 61 SGHSMSDPGTSY--RTRDEVQEVRQTRDPITSFKEKILNHELVTPD--QLKDIDAKVRKE 228
SG T+Y +R+ +EVR + I SF EK ++ PD +L+ D R++
Sbjct: 15 SGIPFQSDETNYFSSSREPGKEVRHQQSAIPSFMEKTISIRDYRPDEKELRVEDYYPRRD 74
Query: 229 VDEATKQSKRNQKSVLKS 282
V + + + N +L+S
Sbjct: 75 VKKFQEVREGNDLDILQS 92
>Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.3b protein.
Length = 713
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 516 YKKNNFYQRYCHINATVKKNNKSV 445
Y KNN +Q YC + + KN + V
Sbjct: 468 YSKNNCFQSYCENSLIIHKNRQDV 491
>Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical
protein C27A7.3a protein.
Length = 743
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 516 YKKNNFYQRYCHINATVKKNNKSV 445
Y KNN +Q YC + + KN + V
Sbjct: 498 YSKNNCFQSYCENSLIIHKNRQDV 521
>U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical
protein D2092.6 protein.
Length = 319
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/92 (16%), Positives = 40/92 (43%)
Frame = +1
Query: 97 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVL 276
+ R+E+ E + +DPI ++ L E + ++ + +++ K+ ++ +
Sbjct: 228 KNREELPEYVEPKDPIMKELQEFLKIEPKSSEENSNSQNSTLTSIEKERKEESEEKEKAV 287
Query: 277 KSXXPIYTTRTWNPSSVASTRLPRSNTLRSNL 372
++ R W +S+ S+T +N+
Sbjct: 288 QADEHRLIVRGWQELLKSSSSSSSSSTTSTNV 319
>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
protein Y53F4B.21 protein.
Length = 1099
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +1
Query: 127 QTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKSXXPIYTTR 306
Q+ +T KE I+N +V D+D +++ A +++++ + Y +
Sbjct: 623 QSMQILTKLKETIMNTLIVKMGAQIDLDLRIQANTHLAVGKTEQDGAPDEEMEYFGYLIK 682
Query: 307 TWNPSSVASTRLPRSNTLRS 366
T VA+T +P + +LRS
Sbjct: 683 TVQKFQVATTVVPIAESLRS 702
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 154 KEKILNHEL-VTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKSXXPIYTTR 306
K I EL + PD + D+ K+R + E+ + + QKS++ IYT +
Sbjct: 440 KHSIPIEELKIHPDAMSDVRVKLRAILAESQELKEYAQKSIVAYLRSIYTMK 491
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 103 SSDTTCRGPTSN-DQSNGTSPSPSP 32
S T RG + N +QSN TSP P P
Sbjct: 494 SKPNTARGSSGNINQSNTTSPEPEP 518
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 103 SSDTTCRGPTSN-DQSNGTSPSPSP 32
S T RG + N +QSN TSP P P
Sbjct: 494 SKPNTARGSSGNINQSNTTSPEPEP 518
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 199 KDIDAKVRKEVDEATKQSKRNQKSVLKSXXPIYTTRTWNPS 321
KD AK+ K+ KR QK L + TWNP+
Sbjct: 53 KDTPAKIPVVTKAEAKEEKRRQKDELLAYKVEQGIATWNPA 93
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 27.5 bits (58), Expect = 7.9
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 174 RARHARSAQGYRRQGT*RSRR-G-H*TIETEPEVGIEEXSXDIYYKNLEPFVRGIHPAAP 347
R++ A S+ R GT RR G + T P + I IY+ N E FVR IH A
Sbjct: 529 RSQWADSSLLGRITGTNHYRRLGLYETANDIPGIKIFRFDSPIYFGNSEMFVRKIHQACG 588
Query: 348 LKHLEVQ 368
L L V+
Sbjct: 589 LNPLIVR 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,311,501
Number of Sequences: 27780
Number of extensions: 281005
Number of successful extensions: 1293
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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