Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1132
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   9.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.4  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 285 SXDIYYKNLEPFVRGIHPAAPLKHLEVQ 368
           S  +YY N+EPF++  +    +++  +Q
Sbjct: 273 SHSLYYVNMEPFMKSQYEENNIEYEGIQ 300


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 121 PPAPRLSSDTTCRGPTSNDQSNGTS 47
           PPAPRL++  + +  + N   + T+
Sbjct: 213 PPAPRLTNSNSIKHESDNSDYSHTT 237


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 285 SXDIYYKNLEPFVRGIHPAAPLKHLEVQ 368
           S  +YY N +PF++  + A  +++  VQ
Sbjct: 273 SRSLYYVNTKPFMKSEYGANNVQYQGVQ 300


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 407 VKIIYIEVLVVARLDLKVFERGSRVDA 327
           + ++Y+E+ +  R  L+   R SR++A
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINA 238


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 407 VKIIYIEVLVVARLDLKVFERGSRVDA 327
           + ++Y+E+ +  R  L+   R SR++A
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINA 238


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 407 VKIIYIEVLVVARLDLKVFERGSRVDA 327
           + ++Y+E+ +  R  L+   R SR++A
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINA 238


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = -1

Query: 118 PAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSL 17
           P+ ++  D  C   +    ++ +SP P P+  +L
Sbjct: 393 PSVKIDEDQKCSIESITSVNSTSSPKPFPRRATL 426


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 186 ARSAQGYRRQGT 221
           AR+AQGY  +GT
Sbjct: 563 ARNAQGYSARGT 574


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 136 DPITSFKEKILNHELVTPD 192
           D + ++K KIL    ++PD
Sbjct: 733 DTVLAYKPKILGKPTISPD 751


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 539 KVTYCVAVTKKIISTKGIA 483
           K   C+A+ +K++   G+A
Sbjct: 306 KRNICIAIKEKLVKDSGVA 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,671
Number of Sequences: 438
Number of extensions: 4411
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)