Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1132
(607 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g59900.1 68414.m06748 pyruvate dehydrogenase E1 component alp... 109 1e-24
At1g24180.1 68414.m03050 pyruvate dehydrogenase E1 component alp... 107 6e-24
At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alp... 60 1e-09
At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putativ... 54 1e-07
At5g09300.2 68418.m01077 2-oxoisovalerate dehydrogenase, putativ... 52 4e-07
At5g09300.1 68418.m01078 2-oxoisovalerate dehydrogenase, putativ... 52 4e-07
At5g34780.1 68418.m04048 dehydrogenase E1 component family prote... 49 2e-06
At1g10520.1 68414.m01184 DNA polymerase lambda (POLL) identical ... 34 0.064
At3g22850.1 68416.m02881 expressed protein similar to auxin down... 29 1.8
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 1.8
At1g49270.1 68414.m05524 protein kinase family protein contains ... 29 3.2
At1g35540.1 68414.m04413 transcriptional factor B3 family protei... 29 3.2
At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identica... 28 4.2
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 4.2
At4g25580.1 68417.m03686 stress-responsive protein-related conta... 28 4.2
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 4.2
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 28 4.2
At2g23490.1 68415.m02804 hypothetical protein 28 5.5
At1g34390.1 68414.m04270 transcriptional factor B3 family protei... 28 5.5
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 27 7.3
At4g23020.1 68417.m03320 expressed protein ; expression support... 27 7.3
At3g32070.1 68416.m04077 hypothetical protein 27 7.3
At3g29700.1 68416.m03744 expressed protein 27 7.3
At2g04000.1 68415.m00367 expressed protein 27 7.3
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 27 7.3
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 27 9.6
At3g62420.1 68416.m07012 bZIP transcription factor family protei... 27 9.6
>At1g59900.1 68414.m06748 pyruvate dehydrogenase E1 component alpha
subunit, mitochondrial (PDHE1-A) identical to SP|P52901
Pyruvate dehydrogenase E1 component alpha subunit,
mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
{Arabidopsis thaliana}
Length = 389
Score = 109 bits (263), Expect = 1e-24
Identities = 45/78 (57%), Positives = 64/78 (82%)
Frame = +1
Query: 22 KGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLK 201
KGP+++EM+TYRY GHSMSDPG++YRTRDE+ VRQ RDPI K+ +L+H+L T +LK
Sbjct: 276 KGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELK 335
Query: 202 DIDAKVRKEVDEATKQSK 255
D++ ++RKEVD+A ++K
Sbjct: 336 DMEKEIRKEVDDAIAKAK 353
>At1g24180.1 68414.m03050 pyruvate dehydrogenase E1 component alpha
subunit, mitochondrial, putative similar to SP|P52901
Pyruvate dehydrogenase E1 component alpha subunit,
mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
{Arabidopsis thaliana}; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 393
Score = 107 bits (257), Expect = 6e-24
Identities = 43/79 (54%), Positives = 63/79 (79%)
Frame = +1
Query: 25 GPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKD 204
GP+++EM+TYRY GHSMSDPG++YRTRDE+ VRQ RDPI ++ +L H++ T +LKD
Sbjct: 281 GPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKD 340
Query: 205 IDAKVRKEVDEATKQSKRN 261
++ ++RKEVD+A Q+K +
Sbjct: 341 MEKEIRKEVDDAVAQAKES 359
>At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alpha
subunit, chloroplast identical to pyruvate dehydrogenase
E1 alpha subunit GB:AAB86803 GI:2454182 from
[Arabidopsis thaliana]; identical to cDNA pyruvate
dehydrogenase E1 alpha subunit mRNA, nuclear gene
encoding plastid protein GI:2454181
Length = 428
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 19 GKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVR-QTRDPITSFKEKILNHELVTPDQ 195
G+GP ++E ETYR+ GHS++DP RD ++ + RDPI + K+ ++ ++L +
Sbjct: 309 GEGPTLVECETYRFRGHSLADPD---ELRDAAEKAKYAARDPIAALKKYLIENKLAKEAE 365
Query: 196 LKDIDAKVRKEVDEATK 246
LK I+ K+ + V+EA +
Sbjct: 366 LKSIEKKIDELVEEAVE 382
>At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/83 (28%), Positives = 49/83 (59%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++EM TYR HS SD T YR DE+Q + +R+P+ F++ + ++ + + +
Sbjct: 351 PVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRFRKWVEDNGWWSEEDESKL 410
Query: 208 DAKVRKEVDEATKQSKRNQKSVL 276
+ RK++ +A + +++ +K L
Sbjct: 411 RSNARKQLLQAIQAAEKWEKQPL 433
>At5g09300.2 68418.m01077 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 401
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/85 (28%), Positives = 51/85 (60%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++E TYR HS SD T YR+ E++ + R+P++ F+ I ++ + D+
Sbjct: 280 PILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWIESNGWWSDKTESDL 339
Query: 208 DAKVRKEVDEATKQSKRNQKSVLKS 282
++++KE+ EA + +++ +K L++
Sbjct: 340 RSRIKKEMLEALRVAEKTEKPNLQN 364
>At5g09300.1 68418.m01078 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/85 (28%), Positives = 51/85 (60%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++E TYR HS SD T YR+ E++ + R+P++ F+ I ++ + D+
Sbjct: 351 PILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWIESNGWWSDKTESDL 410
Query: 208 DAKVRKEVDEATKQSKRNQKSVLKS 282
++++KE+ EA + +++ +K L++
Sbjct: 411 RSRIKKEMLEALRVAEKTEKPNLQN 435
>At5g34780.1 68418.m04048 dehydrogenase E1 component family protein
similar to SP|P50136 2-oxoisovalerate dehydrogenase
alpha subunit, mitochondrial precursor (EC 1.2.4.4)
(Branched-chain alpha-keto acid dehydrogenase component
alpha chain) {Mus musculus}; contains Pfam profile
PF00676: Dehydrogenase E1 component
Length = 365
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/83 (26%), Positives = 47/83 (56%)
Frame = +1
Query: 28 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 207
P+++EM YR HS SD T YR DE+Q + +R+ + F++ + ++ + + +
Sbjct: 121 PVLIEMMIYRVGHHSTSDDSTKYRAADEIQYWKMSRNSVNRFRKSVEDNGWWSEEDESKL 180
Query: 208 DAKVRKEVDEATKQSKRNQKSVL 276
+ RK++ +A + +++ +K L
Sbjct: 181 RSNARKQLLQAIQAAEKWEKQPL 203
>At1g10520.1 68414.m01184 DNA polymerase lambda (POLL) identical to
DNA polymerase lambda GI:12053869 from [Arabidopsis
thaliana]
Length = 529
Score = 34.3 bits (75), Expect = 0.064
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 258 PFRLFSGLVYFFTYLGVDILEL-IWRDELVIQDLLLERSDGVSGLPHLLHLVSRPIRRAG 82
P +F+G+V F +GV L IW+ +LV ++E + H+L + +
Sbjct: 15 PEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVTHVLAMNLEALLHKF 74
Query: 81 VRHRMTRVTVRLHLH 37
+ R++ T RL L+
Sbjct: 75 GKERLSHFTARLMLY 89
>At3g22850.1 68416.m02881 expressed protein similar to auxin
down-regulated protein ARG10 [Vigna radiata] GI:2970051,
wali7 (aluminum-induced protein) [Triticum aestivum]
GI:451193
Length = 248
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 33 GDGDGDVPLLWSFDVGPRHVVSDE 104
GD DG VPL W D VVSD+
Sbjct: 147 GDVDGSVPLYWGTDAEGHLVVSDD 170
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 130 SASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKD 26
S +PP+P S + P +D S+ + P+P P D
Sbjct: 13 SPTPPSPSSSDNQQQSSPPPSDSSSPSPPAPPPPD 47
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 124 SPPAPRLSSDTTCRGPTSNDQSNGTSPSP 38
SPP+P S+D P +D TSP P
Sbjct: 18 SPPSPPSSNDQQTTSPPPSDNQETTSPPP 46
>At1g35540.1 68414.m04413 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02362 B3 DNA binding domain, PF02309:
AUX/IAA family
Length = 605
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 130 TRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKSXXPI 294
T + + SF+ + L TP +KD ++ E+ T++ K Q +L+S I
Sbjct: 449 TTNAVASFR--LFGVSLATPSVIKDPVEQIGLEISRLTQEKKFGQSQILRSPTEI 501
>At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identical
to gi:3883120 gb:AAC77823
Length = 131
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 130 SASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSP 32
SASPP+P L+ T P + + SP+ +P
Sbjct: 70 SASPPSPPLADSPTADSPALSPSAISDSPTEAP 102
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 154 KEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKS 282
+E++LNH L P+ + +A ++ KQS+ +Q+ V+ S
Sbjct: 662 REEVLNHLLARPETVVATEAGAMPLMNGGLKQSQTDQQQVMGS 704
>At4g25580.1 68417.m03686 stress-responsive protein-related contains
weak similarity to Low-temperature-induced 65 kDa
protein (Desiccation-responsive protein 29B)
(Swiss-Prot:Q04980) [Arabidopsis thaliana]
Length = 626
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 72 DVGPRHVVSDERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRRGH 242
++G D G E+ +R F G+DL +R + ++ QG+ +G R H
Sbjct: 323 EMGKHIPAGDYGSRLGKESPERSDEFDLGKDLPTRTQGIQNPQGFDSRGQRRGEEMH 379
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 130 SASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSP 32
S SPP+P +S TT P ++ T+PS P
Sbjct: 12 SPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPP 44
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 154 KEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKSXXPIYTTRTWNPSSVAS 333
+E+++ H+L TP +LK + RKE T Q + + S+ P++T + +
Sbjct: 245 QERLVTHKLCTPSELKLVTLFARKEESGNTTQHEVH-ISLPDGGGPVHTEQHMQYAYGDQ 303
Query: 334 TRLPRSN 354
+ P SN
Sbjct: 304 SAAPPSN 310
>At2g23490.1 68415.m02804 hypothetical protein
Length = 132
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 115 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRN 261
+EV R+ + ++K+LNHE + + K++ R E+ +K RN
Sbjct: 79 EEVSSLRESVDYNRKKVLNHEYLIEEMQKELKVH-RAEIVNVSKVVFRN 126
>At1g34390.1 68414.m04270 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362: B3 DNA
binding domain
Length = 600
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 112 VQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRNQKSVLKSXXP 291
V ++ + T ++ LVTP +KD ++ E+ + T+ K Q L+S
Sbjct: 442 VTQIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEIGSEISKLTEGKKFGQSQTLRSPTE 501
Query: 292 I 294
I
Sbjct: 502 I 502
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 564 CDVYIT*VEGNILCCRYKKNNFYQRYC 484
CD Y + E N CC YK Y +YC
Sbjct: 376 CDKYFSCPESNTCCCLYK----YGKYC 398
>At4g23020.1 68417.m03320 expressed protein ; expression supported
by MPSS
Length = 439
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 195 LIWRDELVIQDLLLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRVTVRLHLHH 34
LI RD L + DL S+G P LL+ I+R+G+ H R+T L H
Sbjct: 21 LILRDFL-LDDLSSCSSNGFKSFPRLLNA---EIQRSGMFHHNRRITCGLAFSH 70
>At3g32070.1 68416.m04077 hypothetical protein
Length = 132
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 115 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRN 261
+EV R+ + ++K+L+HE + + K++ A R E+ +K RN
Sbjct: 79 EEVSSLRESVDYNRKKVLSHEYLIEEMQKELKAH-RAEIVNVSKVVFRN 126
>At3g29700.1 68416.m03744 expressed protein
Length = 132
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 115 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRN 261
+EV R+ + ++K+L+HE + + K++ A R E+ +K RN
Sbjct: 79 EEVSSLRESVDYNRKKVLSHEYLIEEMQKELKAH-RAEIVNVSKVLFRN 126
>At2g04000.1 68415.m00367 expressed protein
Length = 117
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 118 EVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKRN 261
EV R+ + ++K+LNHE + + K + A R E+ +K RN
Sbjct: 65 EVSSLRESVDYNRKKVLNHEYLIEEMQKGLKAH-RAEIVNVSKVVFRN 111
>At1g13330.1 68414.m01547 expressed protein similar to nuclear
receptor coactivator GT198 (GI:16506273) {Rattus
norvegicus}; similar to TBP-1 interacting protein
(GI:7328534) [Homo sapiens]
Length = 226
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +1
Query: 97 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDE 237
+ ++++QE ++T + S + K L L T +++++ DAK+RKEV E
Sbjct: 90 KLQEQLQEKKKTISDVES-EIKSLQSNL-TLEEIQEKDAKLRKEVKE 134
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 130 SASP-PAPRLSSDTTCRGPTSNDQSNGTSPSPSPK 29
S SP P+P LS+ T + N +S SPSP K
Sbjct: 34 SPSPSPSPSLSNKKTPKSNNPNPKSPSPSPSPPKK 68
>At3g62420.1 68416.m07012 bZIP transcription factor family protein
similar to common plant regulatory factor 6 GI:9650826
from [Petroselinum crispum]
Length = 146
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 88 TSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQ--SKRN 261
T R R + R++ K+K L + LK+ +AK+ ++VDEA+K+ +
Sbjct: 22 TDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMES 81
Query: 262 QKSVLKSXXPIYTTRTWNPSSV 327
+ +VL++ T R + +SV
Sbjct: 82 KNNVLRAQASELTDRLRSLNSV 103
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,467,821
Number of Sequences: 28952
Number of extensions: 254856
Number of successful extensions: 1076
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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