Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1131X
         (309 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0S419 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q0TX08 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q01J10 Cluster: OSIGBa0145C12.2 protein; n=6; Oryza sat...    31   5.0  
UniRef50_Q283K6 Cluster: Prophenoloxidase; n=1; Artemia francisc...    31   6.6  
UniRef50_Q2GTK4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  

>UniRef50_Q0S419 Cluster: Putative uncharacterized protein; n=1;
           Rhodococcus sp. RHA1|Rep: Putative uncharacterized
           protein - Rhodococcus sp. (strain RHA1)
          Length = 293

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 209 MALCGKNIGARVDAVVFTEATGKTSILVTSRGYSRFTELVGELTGP 72
           + L  + I A VDAV FT A   +S+L T++   R   L+    GP
Sbjct: 201 LTLLDQIIRAEVDAVTFTSAPAVSSLLSTAKDTDRVEALLHAFAGP 246


>UniRef50_Q0TX08 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 573

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -2

Query: 194 KNIGARVDAVVFTEATGKTSILVTSRGYSRFTELVG 87
           K I +R+DA+     TGK S L T   YS F +LVG
Sbjct: 257 KLITSRIDALNDMAVTGKASKLTTDLAYSLFGKLVG 292


>UniRef50_Q01J10 Cluster: OSIGBa0145C12.2 protein; n=6; Oryza
           sativa|Rep: OSIGBa0145C12.2 protein - Oryza sativa
           (Rice)
          Length = 522

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 118 LEVTRIDVFPVASVKTTASTRAPIFLPQSAMRRNCSKDFY 237
           L V R+   P  +  TTA T   +F P S++R  C KD Y
Sbjct: 187 LSVKRLRGLPDTAGATTAITEEILFPPASSLRSVCLKDLY 226


>UniRef50_Q283K6 Cluster: Prophenoloxidase; n=1; Artemia
           franciscana|Rep: Prophenoloxidase - Artemia
           sanfranciscana (Brine shrimp) (Artemia franciscana)
          Length = 317

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 303 ITMMRRPVFL*L*KHIIDIRY*IKVFTAIATHGALRQKYRGPRRRC 166
           +T MR P+F    KHI ++ Y  K      T   +R   R PRR C
Sbjct: 184 MTAMRDPIFYRWHKHIDELFYEFKETLGAYTKDEVRNDTRAPRRVC 229


>UniRef50_Q2GTK4 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1996

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 88  PTSSVNLE*PLEVTRIDVFPVASVKTTASTRAPIFLPQSAMRRNC 222
           P SS N E  LE+ R ++    +V+TT +  AP+     AM R C
Sbjct: 262 PASS-NRELRLEIPRDEILEPGAVRTTTTRLAPLLAKVEAMVRRC 305


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,533,854
Number of Sequences: 1657284
Number of extensions: 2979854
Number of successful extensions: 7141
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7141
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)