Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1130
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    26   0.31 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    26   0.31 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.72 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 662 MLVRVVRLPGELGGESLIVSWYIGGGVC 579
           +LV  + +P E+G  S  VSWY G  +C
Sbjct: 100 LLVTFLMMPLEIGWAST-VSWYAGDAMC 126


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 662 MLVRVVRLPGELGGESLIVSWYIGGGVC 579
           +LV  + +P E+G  S  VSWY G  +C
Sbjct: 100 LLVTFLMMPLEIGWAST-VSWYAGDAMC 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
 Frame = +1

Query: 526  RAETSGTQSLANVRRQPQQ---TPPP--IYQETIKDSPPSSPGNRTTRTNIINAYK*CM 687
            R  T+ T +       P Q    PPP  +  E  K S P  PG      +  NAY  C+
Sbjct: 1064 RPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQPCEPGQYVPDPHNCNAYYRCV 1122


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 207 WSFRSSMSTRTVCNTYYP*LDALKLVWIL 293
           ++F  +     +C  Y   L ALKLVWI+
Sbjct: 424 YNFNENTIHSKLCKLYATFLIALKLVWIV 452


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 596 YTRKLSKIHLQARQVIV 646
           YT++ SKIHL  R V V
Sbjct: 483 YTKQQSKIHLIVRSVFV 499


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 548 NHWLMYAVNRSRPRL 592
           N W+  A NR  PRL
Sbjct: 315 NPWIYLAFNRELPRL 329


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +1

Query: 574 PQQTPPPIYQETIKDSPPSSPGNRTTRTNIINA 672
           PQQ  P +   + KD       N  +  +++NA
Sbjct: 699 PQQRSPSVTDLSTKDGTTVPESNNGSSPSVLNA 731


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,770
Number of Sequences: 336
Number of extensions: 4022
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)