BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1130 (820 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 5.9 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 5.9 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 7.8 EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 7.8 DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 7.8 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 7.8 AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 7.8 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 22.2 bits (45), Expect = 5.9 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +2 Query: 41 QPLYFIMLPTV--SVGWPVLAKTIWARFPYARCRRLSGTRNEQ 163 +P Y PT+ S G P + IW+ FP + + + N++ Sbjct: 289 KPFYPGYYPTMTYSNGLPFPQRPIWSNFPIYKYKYIREIMNKE 331 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 22.2 bits (45), Expect = 5.9 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +2 Query: 41 QPLYFIMLPTV--SVGWPVLAKTIWARFPYARCRRLSGTRNEQ 163 +P Y PT+ S G P + IW+ FP + + + N++ Sbjct: 289 KPFYPGYYPTMTYSNGLPFPQRPIWSNFPIYKYKYIREIMNKE 331 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 21.8 bits (44), Expect = 7.8 Identities = 5/20 (25%), Positives = 14/20 (70%) Frame = -2 Query: 699 VGVVHTLFVSVNYVGTCCTI 640 + +++++ + ++ VG CC I Sbjct: 60 LAIIYSMLLIMSLVGNCCVI 79 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 21.8 bits (44), Expect = 7.8 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -3 Query: 554 NDCVPEVSARKC 519 NDC EV AR+C Sbjct: 315 NDCHAEVVARRC 326 >DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine receptor beta2subunit protein. Length = 427 Score = 21.8 bits (44), Expect = 7.8 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +2 Query: 701 LHSCIICFVAIIRTSITALTFLFTFYYAN 787 LH +ICFV TS +AL L + + + Sbjct: 19 LHGQVICFVCKDITSTSALYRLKLYLFCD 47 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 21.8 bits (44), Expect = 7.8 Identities = 5/20 (25%), Positives = 14/20 (70%) Frame = -2 Query: 699 VGVVHTLFVSVNYVGTCCTI 640 + +++++ + ++ VG CC I Sbjct: 60 LAIIYSMLLIMSLVGNCCVI 79 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 21.8 bits (44), Expect = 7.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 556 ANVRRQPQQTPPPIYQETIKDSPPSSP 636 A +RR ++TP P + ET K SP Sbjct: 174 AQIRRNERRTPDP-HDETAKKPRVLSP 199 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 225,133 Number of Sequences: 438 Number of extensions: 4628 Number of successful extensions: 10 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 26096055 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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