Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1129
(690 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 6e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 6e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 6e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 6e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 6e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 3e-29
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 122 2e-28
SB_54| Best HMM Match : Actin (HMM E-Value=0) 103 2e-22
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 93 3e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 2e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.67
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 30 2.0
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.0
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 29 2.7
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 2.7
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 2.7
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.7
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38782| Best HMM Match : PAN (HMM E-Value=2.3e-05) 29 3.6
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.6
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 4.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.2
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 6.2
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 28 6.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 6.2
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 8.2
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 8.2
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 8.2
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFT 202
Score = 119 bits (287), Expect = 2e-27
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLS 141
Score = 126 bits (304), Expect = 2e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 142 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 201
Score = 116 bits (280), Expect = 1e-26
Identities = 52/60 (86%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLS 141
Score = 126 bits (304), Expect = 2e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 142 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 201
Score = 118 bits (283), Expect = 6e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142
Score = 126 bits (304), Expect = 2e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Score = 124 bits (298), Expect = 9e-29
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142
Score = 119 bits (287), Expect = 2e-27
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYE--GYA 595
LYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 143 LYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 105 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFT 164
Score = 118 bits (283), Expect = 6e-27
Identities = 52/60 (86%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 356
EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3
Query: 429 NREKMTQIMFETFNTPAMYVAIQAVLS 509
N + M +IMFETFN+PAMYVAIQAVLS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLS 104
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 122 bits (295), Expect = 2e-28
Identities = 55/60 (91%), Positives = 58/60 (96%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFT
Sbjct: 21 LYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFT 80
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 450 IMFETFNTPAMYVAIQAVLS 509
IMFE FN+PA+YVAIQAVLS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLS 20
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 103 bits (246), Expect = 2e-22
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 685
LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF
Sbjct: 2187 LYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = +3
Query: 336 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 431
EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP N
Sbjct: 60 EASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKN 119
Query: 432 REKMTQIMFETFNTPAMYVAIQAVLS 509
REKM ++MFE + +Y+AIQAVL+
Sbjct: 120 REKMIEVMFENYQFEGVYIAIQAVLT 145
Score = 89.8 bits (213), Expect = 2e-18
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 685
LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F
Sbjct: 146 LYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAF 204
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VG+
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGD 59
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/59 (64%), Positives = 52/59 (88%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 685
LYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F
Sbjct: 168 LYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +3
Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLS
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLS 167
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 473
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 474 PAMYVAIQAVLS 509
PA ++ +VL+
Sbjct: 63 PAFFLCKNSVLT 74
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 512 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 670
+A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 530 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 673
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSF 685
LYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG++F
Sbjct: 772 LYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNF 831
Query: 686 T 688
T
Sbjct: 832 T 832
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 79 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 225
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 401
EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 289 EAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 530 TGIVLDSGDGVSHTVPI 580
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 207 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 91
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 210 GRDGRYGTEGLVRRREAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 380
GR G + GL + S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 381 EEHPVLLTEAPLNPKANRE 437
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 392 CPAH*G---SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 502
CP G SP P+ R D+P V A HV HPSR
Sbjct: 256 CPGEEGKTISPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +3
Query: 510 CTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 602
CT+ +P +TP T TPC PST +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 444 TQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPS--TRDTHSPTP 608
+Q+ E +N P+ + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVV---PPVSCWTPATV 560
P L+T PL +T NTP + +++ T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 561 SPTP--CPSTRDTHSPTPSCVWT*P 629
+ TP +T + TP V T P
Sbjct: 94 TTTPLLVTTTPFLVTTTPPLVTTTP 118
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 520 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHE 657
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +3
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT 569
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 570 PCPSTRDTHSPTP 608
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 501 VLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 611
++ C+RP PPV+ T +T S T +T T + TP+
Sbjct: 617 LVDCSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 531 PVSCWTPATVSPTPCPSTRDTHSP 602
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 27.9 bits (59), Expect = 8.2
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +3
Query: 363 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
E +APE E P + E+ P+ MT + ET TP VA + + + P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 531 PVSCWTPATVSPTPCPSTRDTHSP 602
+ TV+P + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNE 365
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 97 EVAALVVDNGSGMCKAGFAGDDAPRAV 177
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 489 AIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 608
A+Q L+C R V +S P+ V P P T TH+P P
Sbjct: 614 AVQCTLACPR-VSRVLSPSGPSVVVTLPLPPTDHTHTPPP 652
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 316 VTIPCSMGYLRVRIPLLLCASLLRTSPSVP 227
V PC M LRVR+ C S+LR + P
Sbjct: 99 VVCPCCMSLLRVRVACPCCVSVLRVLIACP 128
>SB_38782| Best HMM Match : PAN (HMM E-Value=2.3e-05)
Length = 596
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 280 RIPLLLCASLLRTSPSVPYRPSRPDGGAFPRSRGTRRE 167
R+ ++LCA RTS V + RPDGG GT+RE
Sbjct: 538 RLCMVLCA---RTSACVSFN-HRPDGGICQLKNGTKRE 571
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +3
Query: 408 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTR 587
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 588 DTHSP 602
P
Sbjct: 946 QPQPP 950
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 459 ETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTRD 590
+ + P + +Q +++ P + P +C TP +SP T D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 504 LSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 611
+ TRP VP +T PTP P T P P+
Sbjct: 929 IQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 565 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 666
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 617
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -2
Query: 347 MPNLLHVIPVSDDSVFDGVFEGQDTSFALCLSPTYESFCPIPTITP*WRGLPTIEGNTAR 168
+P+L+ +S+D+V GV + + P+Y +F + + +P + GNT
Sbjct: 4245 IPSLVKQFNISNDTVNVGVVTYSASQQEIIALPSYNNFSDVEKLV---SKVPYLGGNTLS 4301
Query: 167 GASSPAKPALHIPE 126
GA+ H+P+
Sbjct: 4302 GAALNYLRWEHLPQ 4315
>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4275
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 216 DGRYGTEGLVRRREAQSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 392
D R ++ +REA + G +P H WD++ K ++ + E+ + P P
Sbjct: 2939 DHRGAWNTMLLKREALQQTGQYLRLFPNLHNNEPYWDELAKEVYRYIGNKEVPLLPVHRP 2998
Query: 393 VLLTEAPLNPKANREKMTQIMFETF 467
V E+ K E+ +++ E F
Sbjct: 2999 V-EDESASEKKEQDEQASRVKIEWF 3022
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 328 SSQLVTI--PCSMGYLRV-RIPLLLCASLLRTSPSVPYRP 218
S LV++ P S Y + RIP LC L+ PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = +3
Query: 363 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 531 PVSCWTPATVSP--TPCPSTRDTHSPT--PSCVW 620
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 498 AVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 629
+V CT P ++ P T + T P T+ P PS + T P
Sbjct: 146 SVEDCTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +3
Query: 351 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTR 518
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 519 PVVPPVSCWTPATVSP--TPCPST 584
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 402 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTP 572
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 573 CPSTRDTHSP 602
+T T +P
Sbjct: 575 TAATEITAAP 584
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,784,696
Number of Sequences: 59808
Number of extensions: 585142
Number of successful extensions: 2331
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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