Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1128
(817 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 78 2e-15
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 64 2e-11
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 33 0.064
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 30 0.34
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 29 1.0
SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe... 27 3.2
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 25 9.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 9.7
SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces... 25 9.7
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 77.8 bits (183), Expect = 2e-15
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 LFFGCRYKEKDYHCREELEGMVGDGNLSLYCAFSRDQEDKIYVQHKIFENRETIWRLLN- 203
LFFGCR K D+ ++ E +G L L+CAFSRDQE K YVQH I EN E ++ LLN
Sbjct: 444 LFFGCRNKSMDFLFEKDWEKYTEEGTLKLFCAFSRDQEKKKYVQHSIQENGELVYNLLNE 503
Query: 204 NNAHVFISGNAKSMPDN 254
+ F+SG++ MP +
Sbjct: 504 KDGMFFVSGSSGKMPSS 520
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +3
Query: 27 LFFGCRYKEKDYHCREELEGM--VGDGNLSLYCAFSRDQEDKIYVQHKIFENRETIWRLL 200
LF+GC+Y +KD+ +EE + V + L AFSR+Q+ KIYVQH++ E+ +TI +L+
Sbjct: 567 LFYGCQYSDKDFLYKEEWQQYKDVLKDSFELITAFSREQDHKIYVQHRLLEHSDTIAKLV 626
Query: 201 NNNAHVFISGNAKSM 245
A +I G+A M
Sbjct: 627 EEGAAFYICGDADHM 641
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 32.7 bits (71), Expect = 0.064
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +3
Query: 9 SKDIMHLFFGCRYKEKDYHCREELEGMVGDGNLS-LYCAFSRDQEDKIYVQHKIFENRET 185
S DI+ L+ G R + ++Y E+ E L+ + AFSRDQ KIY+Q + ++
Sbjct: 888 SGDIL-LYLGSRTQREEYLYGEDWEAYHSANLLTHIGQAFSRDQPYKIYIQDVMRSTKDM 946
Query: 186 IWR-LLNNNAHVFISGNAKSMPD 251
+ + L++ ++ G +P+
Sbjct: 947 LKKALMDEGGSFYLCGPTWPLPE 969
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 30.3 bits (65), Expect = 0.34
Identities = 20/43 (46%), Positives = 22/43 (51%)
Frame = +2
Query: 284 VCSGTSAAASSDAVRTCRSKVDSRSRPGDAWHSRWVASRTSQG 412
V S TSAAASS + T S V S S + S AS TS G
Sbjct: 114 VDSATSAAASSSVIPTSSSVVASSSEVASSTTSSAAASATSTG 156
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 536 NENVHHRIFYNAICRSICGPRAPSTSTHRIQ*IV 435
NE + YN + +IC PR T+RI+ +V
Sbjct: 4 NEKANISASYNDLIATICNPRISDVGTYRIESVV 37
>SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 45 YKEKDYHCREELEGMVGDGNLSLYCAFSRDQEDKIYVQHKIFENRETIWRLLNNNAHVFI 224
Y E Y + L +V G+ L C F+ ED ++F+N +++W L+ N +
Sbjct: 151 YFEHQYDLMQRLHPLV-IGHFDLICLFA--PEDA----KEVFKNSKSVWELIQRNIKYAV 203
Query: 225 S 227
S
Sbjct: 204 S 204
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 253 LSGMLLALPDMNTWALLFSSRQIVSRFSNILCWT*ILSSWSLEK 122
L L+A+ D W + + IVS F N L W +LS + K
Sbjct: 280 LINSLVAIHDYGAWDTVLMGKAIVSSFEN-LNWEAMLSMFDNPK 322
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 161 QDIREPRDDLATAEQQRPRVHIRQRQEHAGQLREALADVIRVCSGTS 301
QDI E ++ +Q+ R + Q QE+ ++ + L D V S +S
Sbjct: 513 QDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKEVLSKSS 559
>SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -1
Query: 568 VVYGFKLRSRQMKMFTIEFFITPSVARYADHGLPLPQHIESSELFSFDP 422
V+YGF L R M F FF + D+ + +E S +DP
Sbjct: 156 VIYGFSLSYRIMCRFNSGFFYRNKALSHYDYYWRVEPGVEYSCDIPYDP 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,147,423
Number of Sequences: 5004
Number of extensions: 62274
Number of successful extensions: 170
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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