Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1127
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 172 7e-42
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 168 1e-40
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 159 9e-38
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 120 3e-26
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 120 4e-26
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 118 1e-25
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 116 5e-25
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 112 8e-24
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 4e-23
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 108 2e-22
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 106 5e-22
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 105 9e-22
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 103 6e-21
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 100 3e-20
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 97 3e-19
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 93 7e-18
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 92 1e-17
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 85 2e-15
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 82 2e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 9e-14
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 54 3e-06
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 53 7e-06
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 50 5e-05
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 50 5e-05
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 50 8e-05
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 50 8e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 49 1e-04
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 48 2e-04
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 48 3e-04
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 48 3e-04
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 47 4e-04
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 0.001
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 46 0.001
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.002
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 45 0.002
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 45 0.002
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 44 0.003
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 44 0.003
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 44 0.004
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.004
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.004
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 44 0.004
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 43 0.010
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.010
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.010
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 42 0.013
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 42 0.013
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.013
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.022
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.022
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.022
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 40 0.067
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 40 0.067
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.089
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.089
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 40 0.089
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.16
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.16
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 39 0.16
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.21
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 38 0.21
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.27
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.36
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 37 0.47
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.47
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 37 0.63
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.83
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 1.1
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 35 1.9
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 35 2.5
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 35 2.5
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 3.3
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 3.3
UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3; ... 34 4.4
UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep: P... 34 4.4
UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response regul... 33 5.8
UniRef50_Q0TS95 Cluster: L-fuculokinase; n=3; Clostridiales|Rep:... 33 7.7
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 172 bits (419), Expect = 7e-42
Identities = 79/83 (95%), Positives = 80/83 (96%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 163 RAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKA 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
STVKRGTSAGRKVGLIAARRTGR
Sbjct: 223 STVKRGTSAGRKVGLIAARRTGR 245
Score = 153 bits (370), Expect = 6e-36
Identities = 69/83 (83%), Positives = 76/83 (91%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
VHFRDPY++K RKELFI P+ +H
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMH 83
Score = 146 bits (355), Expect = 4e-34
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK DRGRLAR SGN+ATVI HN
Sbjct: 82 MHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQ 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
D K+TRVKLPSGAKKV+PS+NRA
Sbjct: 142 DTKKTRVKLPSGAKKVVPSANRA 164
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 168 bits (408), Expect = 1e-40
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VGIVAGGGRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 139 RAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKA 198
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
STV+R TSAGRKVGLIAARRTGR
Sbjct: 199 STVRRDTSAGRKVGLIAARRTGR 221
Score = 131 bits (316), Expect = 2e-29
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPYK+K R E FI + ++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMY 83
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
+YTGQF+YCGKKA L++ RG+LARASGN+ATVI HNP
Sbjct: 82 MYTGQFIYCGKKANLQI------------------------RGKLARASGNYATVISHNP 117
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
D K++RVKLPSG+KKV+PS+NRA
Sbjct: 118 DTKKSRVKLPSGSKKVIPSANRA 140
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 159 bits (385), Expect = 9e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (343), Expect = 1e-32
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 2e-31
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 120 bits (290), Expect = 3e-26
Identities = 56/80 (70%), Positives = 62/80 (77%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+GI AG GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+ STV
Sbjct: 156 IGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTV 215
Query: 695 KRGTSAGRKVGLIAARRTGR 754
R GRKVG IAARRTGR
Sbjct: 216 ARTAPPGRKVGHIAARRTGR 235
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
+Y GQ + G A E GN++P+G +PEGT V N+E + D G+LAR +G++A V+G
Sbjct: 74 MYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR-- 131
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+T ++LPSG K +P+ +RA
Sbjct: 132 AGAKTILRLPSGKDKEVPNDSRA 154
Score = 35.9 bits (79), Expect = 1.1
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 200 VVHFRDPYKF 229
V D +F
Sbjct: 57 RVVREDGVEF 66
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 120 bits (289), Expect = 4e-26
Identities = 56/77 (72%), Positives = 64/77 (83%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 203 VHFRDPYKFKTRKELFI 253
V FR P++FK +KELF+
Sbjct: 61 VTFRHPFRFKKQKELFV 77
Score = 41.1 bits (92), Expect = 0.029
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 282 VYCGKKATLEVGNVMPVGAMPEG 350
+YCGKKATL VGNV+P+ ++PEG
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEG 110
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 118 bits (285), Expect = 1e-25
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGG +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + +
Sbjct: 152 RAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRP 211
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
STV R GRKVG IAARRTGR
Sbjct: 212 STVSRNAPPGRKVGHIAARRTGR 234
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
L GQ + GK A + GN++ VG +PEGTI+ N+E+ D G+ AR++G + V+G
Sbjct: 73 LVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTG 132
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
D + VKL S + S+ RA
Sbjct: 133 D--KVLVKLSSEKIAQVSSNARA 153
Score = 42.3 bits (95), Expect = 0.013
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 200 VVHFRDPYKF 229
++ D KF
Sbjct: 56 LIKLDDGTKF 65
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 116 bits (280), Expect = 5e-25
Identities = 48/74 (64%), Positives = 62/74 (83%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
LY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K DRG +ARASGN+ATVI HN
Sbjct: 73 LYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNA 132
Query: 444 DAKRTRVKLPSGAK 485
D + TR++LPSGAK
Sbjct: 133 DNETTRIRLPSGAK 146
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 146 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKALH 271
+G+VK I HDPGRGAPLA V FR+P ++ KELFI + L+
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLY 74
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 112 bits (270), Expect = 8e-24
Identities = 52/85 (61%), Positives = 60/85 (70%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + +GI AG GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G
Sbjct: 155 KARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPG 214
Query: 680 KASTVKRGTSAGRKVGLIAARRTGR 754
+TV R G+KVG IAAR TGR
Sbjct: 215 YPTTVARNAPPGQKVGHIAARCTGR 239
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
+YTGQ V G A GN++P+ A+PEGT + N+E + D G+LAR+ G +A ++G +
Sbjct: 78 MYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSG 137
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
++ ++LPSG K + + RA
Sbjct: 138 NS--AIIQLPSGKVKQVNAKARA 158
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 4e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 215 DPYKFKTRK 241
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 108 bits (259), Expect = 2e-22
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Frame = +2
Query: 512 MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAST 691
+VG+VAGGG DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK +T
Sbjct: 151 IVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTT 210
Query: 692 V-KRGTSAGRKVGLIAARRTG 751
V K+ S +K+GL+ ARRTG
Sbjct: 211 VSKKDISQEQKIGLVGARRTG 231
Score = 62.9 bits (146), Expect = 8e-09
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
+YTGQ + G A +++GN+ + +PEG V ++E D G A +G+++ V+ H
Sbjct: 68 MYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRK 127
Query: 444 DAKRTRVKLPSGAKKVLPSSNR 509
+ T +K+PSG K + S R
Sbjct: 128 ETNETVIKIPSGKKLTVSSECR 149
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 106 bits (255), Expect = 5e-22
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+G+++GGG+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK +T+
Sbjct: 160 IGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTI 219
Query: 695 KRGTSAGRKVGLIAARRTGR 754
RG GRKVG IAAR+TGR
Sbjct: 220 ARGDPPGRKVGHIAARKTGR 239
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G + CG A ++ GN +P+ +PEG + N+E + D G+ ARA G +AT+I H D
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVG 138
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
RT V+LPSG + RA
Sbjct: 139 RTYVQLPSGKVRTFDPRCRA 158
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 200 VVHFRD 217
V F D
Sbjct: 61 RVRFED 66
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 105 bits (253), Expect = 9e-22
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + +VGIVAG GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H G
Sbjct: 152 KCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPG 211
Query: 680 KASTVKRGTSAGRKVGLIAARRTG 751
K +TV R GRKVGLIAARRTG
Sbjct: 212 KPTTVSRNAPPGRKVGLIAARRTG 235
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A
Sbjct: 78 GNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EAT 135
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
RT V +PSG K L RA
Sbjct: 136 RTAVSMPSGNIKWLNPKCRA 155
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 103 bits (246), Expect = 6e-21
Identities = 45/80 (56%), Positives = 59/80 (73%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+G+VAGGG+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV
Sbjct: 192 IGVVAGGGKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTV 251
Query: 695 KRGTSAGRKVGLIAARRTGR 754
R + G+KVGLIAARR+GR
Sbjct: 252 SRRSPPGQKVGLIAARRSGR 271
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
LY + + CG +A GNV+P+ +P G VCN+EEK D G+LAR++G F V+ H+
Sbjct: 108 LYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSK 167
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
T++KLPS K+L S RA
Sbjct: 168 YNNVTKLKLPSKKIKILSSFCRA 190
Score = 42.3 bits (95), Expect = 0.013
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
+ F FK EL+I + L+
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLY 109
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 100 bits (240), Expect = 3e-20
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + M+G +AGGG ++P + AG + +K K +P VRGVA HPHGGG HQH+G
Sbjct: 153 KNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVG 212
Query: 680 KASTVKRGTSAGRKVGLIAARRTGR 754
++STV R T G KVG IAAR+TGR
Sbjct: 213 QSSTVSRDTPPGAKVGSIAARKTGR 237
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G+ + G K+ +E GNV+ + +P+GTIVCN+E+ D G + +++G ATV H +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG- 137
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
VKLPSG L NRA
Sbjct: 138 -VTVKLPSGKFTTLNPKNRA 156
Score = 33.1 bits (72), Expect = 7.7
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 196
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 197 AVVHFRD 217
A V F D
Sbjct: 58 AKVRFED 64
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + MVG +AGGG ++P + AG + +++ K +P VRGVA HPHGGG HQH+G
Sbjct: 152 KNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVG 211
Query: 680 KASTVKRGTSAGRKVGLIAARRTGR 754
++STV R G KVG IAAR+TGR
Sbjct: 212 QSSTVSRNAPPGAKVGSIAARKTGR 236
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G + G K+ + GNV+ V +P+GT VCN+E+ D G + +++G ATV H
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG- 136
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
+KLPSG L NRA
Sbjct: 137 -VVLKLPSGRFSTLNPKNRA 155
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 200 VVHFRD 217
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 93.1 bits (221), Expect = 7e-18
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
VGIVAGGGRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G + V
Sbjct: 158 VGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPV 215
Query: 695 KRGTSAGRKVGLIAARRTGR 754
+ G+KVG I +R TGR
Sbjct: 216 PKTAPPGQKVGFIGSRCTGR 235
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
LY GQ V GK A+ + GN+M +G +PEGT++ N+E++ D G+ ARA G +A VIG P
Sbjct: 74 LYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKP 133
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ +T ++LPSG + S RA
Sbjct: 134 EENKTIIRLPSGRTVEVDSRGRA 156
Score = 38.7 bits (86), Expect = 0.16
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 200 VV 205
+
Sbjct: 57 KI 58
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 92.3 bits (219), Expect = 1e-17
Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGKAST 691
VG+VA G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+ ST
Sbjct: 151 VGVVAASGIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPST 209
Query: 692 VKRGTSAGRKVGLIAARR 745
V R GRKVG ++ +R
Sbjct: 210 VGRNAPPGRKVGRLSPKR 227
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3
Query: 267 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPD 446
Y GQ + G T+ G + +P+G+ V N+E D G R++G FA V+ H
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH--- 127
Query: 447 AKRTRVKLPSGAKK 488
R +KLPSG+ +
Sbjct: 128 GSRVTLKLPSGSMR 141
Score = 33.1 bits (72), Expect = 7.7
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 196
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ ++G++AGGGR +KP +KAG Y+ + WP V GV N +HP GG H + K
Sbjct: 154 RAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKP 213
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
TV + GRKVG I AR+TGR
Sbjct: 214 FTVSKWAPPGRKVGYIGARKTGR 236
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G VY GK+A +G++ P+ +PEGT + LE D G+L RASG+FA ++ D
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD-- 135
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
+ V+LPSG K L ++ RA
Sbjct: 136 KVIVQLPSGQFKTLSANARA 155
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = -3
Query: 757 ESSGPASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLV 578
E+ PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV
Sbjct: 13 ETPCPASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILV 72
Query: 577 VCPSSFQNRFVNTSTSSNNTDHA 509
+ + QN VN +TSS++TDH+
Sbjct: 73 IGTAGLQNGLVNAATSSHHTDHS 95
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 160
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G + + A ++VGN P+ +PEGT++ N+E K G++AR++G ++G + D K
Sbjct: 114 GMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGK 173
Query: 453 RTRVKLPSG-AKKVL 494
++L SG +KVL
Sbjct: 174 YVTLRLTSGEVRKVL 188
Score = 39.5 bits (88), Expect = 0.089
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +2
Query: 587 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTVKRGTSAGRKVGLIAARRT 748
K RN W P VRG MNP +HPHGGG IG+ S V T G+K + R T
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV---TPWGKKALGVKTRNT 265
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
L G V G +A ++VGN +P+ +P GT++ N+E K G+LAR++G A ++G
Sbjct: 110 LEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--K 167
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K V+L SG +++ ++RA
Sbjct: 168 EGKYAIVRLSSGEVRLVLLTSRA 190
Score = 36.3 bits (80), Expect = 0.83
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
VGN +P+ +P GT V N+E +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 492 LPSSNRA 512
+ S RA
Sbjct: 419 IDSRCRA 425
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 427 IGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 485
++ GN MP+ +PEGTIV N+E G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 486 KVL 494
+++
Sbjct: 209 RMI 211
Score = 41.9 bits (94), Expect = 0.017
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQHIGK 682
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
L G V G ++ GN MP+ +MP GTI+ N+E G++AR++G +A ++G
Sbjct: 110 LAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR-- 167
Query: 444 DAKRTRVKLPSGAKKVL 494
D ++L SG ++++
Sbjct: 168 DQGMAILRLNSGEQRLV 184
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G + G + +++GN +P+ MP GT + N+E + G+LARA+G A +I + K
Sbjct: 111 GDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGK 168
Query: 453 RTRVKLPSGAKKVL 494
+KLPSG +++
Sbjct: 169 SATLKLPSGEVRLI 182
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 602 CW----PYVRGVAMNPVEHPHGGG 661
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+GIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 426 IGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 480
Query: 695 K---RGTSAGRKVGLIAARR 745
+ T AG + G+ +R
Sbjct: 481 SPWGKPTKAGFRAGVGVGKR 500
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 309 EVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 488
+VGN +P+ + GT V ++E +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 489 VLPSSNRA 512
++ S RA
Sbjct: 417 LIDSRCRA 424
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+GIV+ + + KAG + ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 362 IGIVSNPSHGTRKLRKAGHS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGRPSV 416
Query: 695 K---RGTSAGRKVGLIAARR 745
+ T AG + +A+R+
Sbjct: 417 SPWGKPTKAGYRSPSVASRK 436
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 309 EVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 488
+VGN +P+ GT V N+E + G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 489 VLPS 500
+ S
Sbjct: 353 AVDS 356
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 48.0 bits (109), Expect = 3e-04
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI-GHN 440
L G FV G + GN +P+ ++P GT+V N+E G++ RA+G A +I HN
Sbjct: 204 LKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN 263
Query: 441 PDAKRTRVKLPSGAKKVLP 497
K ++LPSG K P
Sbjct: 264 ---KYAILRLPSGELKSFP 279
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+GIV+ + + KAG + ++ +R P VRGVAMNP++HPHGGG + G +V
Sbjct: 286 IGIVSNLNHFNTDLKKAGAS--RWLGRR---PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 479
++ GN +P+ +P G+I+ N+ RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
Score = 40.3 bits (90), Expect = 0.051
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 503 QQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 682
Q + G G ++ + + AGR+ ++ KR P VRGVAMNP++HPHGGG + G
Sbjct: 166 QSAVKGANLGNTKLFEKLKMAGRS--RWLSKR---PSVRGVAMNPIDHPHGGGEGKTSGG 220
Query: 683 ASTVKRGTSAGRKVGLIAARRTGR 754
+V + GR + R+T R
Sbjct: 221 RPSVSKW---GRLTKNVKTRKTKR 241
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 530 GGGRIDKPILKAGRAYHKYKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKASTVK 697
G G + K R + K R+ W P VRGVAMNPV+HPHGGG + KAS
Sbjct: 192 GFGTLGKTSNLMQRNVNLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKKSKKASPTN 251
Query: 698 RGTS 709
+ S
Sbjct: 252 KWAS 255
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
GN +P+ MP GT+V N+ + G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Score = 38.3 bits (85), Expect = 0.21
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
VG+ + + + KAGR+ N P VRG+AMN EHPHGGG + G
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 581 KYKVKRNCWPYVRGVAM-NPVEHPHGG 658
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 584 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 679
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 584 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 679
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 36.3 bits (80), Expect = 0.83
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 50 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 226
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
VGN + + +P GT V N+E +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 492 LPSSNRA 512
+ S RA
Sbjct: 381 IDSRCRA 387
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
VGIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 389 VGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEG 350
+YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 48 IYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/74 (29%), Positives = 43/74 (58%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G + G ++ ++VGN +P+ +P T + N+E G+L R++G+ AT++ D
Sbjct: 139 GDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGG 198
Query: 453 RTRVKLPSGAKKVL 494
V+LPSG ++++
Sbjct: 199 YCVVRLPSGEQRLV 212
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 303 TLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 479
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSG 292
Score = 39.9 bits (89), Expect = 0.067
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +2
Query: 458 KSKATVWSQEGS----AIKQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 625
K KA V Q G +++ +G+V+ ++ + KAGR+ ++ R P VRGV
Sbjct: 282 KKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGV 336
Query: 626 AMNPVEHPHGGG 661
AMN +HPHGGG
Sbjct: 337 AMNKCDHPHGGG 348
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + +G V G +++ + KAGR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 190 KCRATIGEVGNGEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+G V ++KAG + +++ KR P VRGVAMNPV+HPHGGG
Sbjct: 168 LGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAMNPVDHPHGGG 211
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
+GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 188 IGIVSNENHGKRNFRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
Score = 39.1 bits (87), Expect = 0.12
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
+GN + + +P GT++ N+E + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 492 LPSSNRA 512
+ S RA
Sbjct: 180 INSQCRA 186
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
+G+ MP+G M GTI+ N+E ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 492 LPSSNRA 512
+ + RA
Sbjct: 73 INAKCRA 79
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +2
Query: 584 YKVKRNCW----PYVRGVAMNPVEHPHGGG 661
YK ++ W P VRGVAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRK 94
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 694
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 42.3 bits (95), Expect = 0.013
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
Q +V G +D +G+A K P VRGV MNPV+HPHGGG
Sbjct: 186 QNRPAVVGQAGNVDSKNRASGKAGSKRWPGSR--PRVRGVVMNPVDHPHGGG 235
Score = 37.5 bits (83), Expect = 0.36
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +3
Query: 204 YTSAIHTXXXXXXXXXXXXXLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMX 383
Y S +H + G + G A VGN P MP GT++ +E
Sbjct: 90 YISPVHHGDGDKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPG 149
Query: 384 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 512
G+ ARA+G A + + +R LP G + +P + A
Sbjct: 150 KGGQSARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPA 190
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 42.3 bits (95), Expect = 0.013
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 485
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGET 189
Query: 486 KVLPSSNRA 512
+ RA
Sbjct: 190 RKFLKECRA 198
Score = 39.5 bits (88), Expect = 0.089
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
VG+V+ I KAGR H R P VRG AMNP +HPHGGG
Sbjct: 200 VGVVSNLDHNLVVIGKAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 596 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
L G + G+ A ++VGN +P+ +P GT+V +E K + AR++G ++
Sbjct: 116 LSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVAKEG 175
Query: 444 DAKRTRVK 467
+ R++
Sbjct: 176 EYATLRMR 183
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 602 CW----PYVRGVAMNPVEHPHGGG 661
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
Score = 36.7 bits (81), Expect = 0.63
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 339 MPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
MP GT + N+E + G+LARA+G A +I + K +KLPSG +++
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLI 52
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 602 CW----PYVRGVAMNPVEHPHGGG 661
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.022
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 542 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 658
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 33.1 bits (72), Expect = 7.7
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 294 KKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLP 473
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 474 SGAKKVLPSSNRAWSVL 524
S +++ SN ++ +
Sbjct: 161 SKECRLI--SNECYATI 175
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 39.9 bits (89), Expect = 0.067
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -2
Query: 392 TSIXHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSG 255
T++ H + +AHNGTL S R +I+N + L+TI++L V G
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALG 52
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 39.9 bits (89), Expect = 0.067
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
GN +P+ +P GT++ N+ + G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 37.1 bits (82), Expect = 0.47
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
VG+ + + + KAGR+ N P VRG+AMN +HPHGGG + G
Sbjct: 311 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.089
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGG 658
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 339 MPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 479
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.089
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 584 YKVKRNCWPYVRGVAMNPVEHPHGGG 661
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 39.5 bits (88), Expect = 0.089
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 485
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 486 KVL 494
+ +
Sbjct: 280 RYI 282
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGG 658
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 688
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
Score = 36.7 bits (81), Expect = 0.63
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAK 452
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 453 RTRVKLPSGAKKVL 494
+KLPSG ++L
Sbjct: 167 YVTIKLPSGEIRLL 180
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 569 RAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 664
R K +RN W P VRG+AMN HPHGGGN
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 614 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 730
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 38.3 bits (85), Expect = 0.21
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 524 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 688
+ G I + + K + + + K + P +RG AMN V+HPHGGG GKAS
Sbjct: 182 ILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGE----GKAS 232
Score = 37.9 bits (84), Expect = 0.27
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
L G + G KA L++GN +P+ + G+ + N+E + +G L + + N +I
Sbjct: 101 LKIGSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIG 159
Query: 444 DAKRTRVKLPSGAKKVL 494
D T VKLPSG K+L
Sbjct: 160 DIYVT-VKLPSGEIKLL 175
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.27
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 294 KKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGH 437
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.36
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 587 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 679
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 37.5 bits (83), Expect = 0.36
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+G V+ + + KAGR+ ++ +R P VRGVAMN +HPHGGG
Sbjct: 374 IGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMNACDHPHGGG 417
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 37.1 bits (82), Expect = 0.47
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = -2
Query: 512 CPVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSIXHFLFKIAHNGTLRHSS 333
C + W NLL R L IR+V++ + ++ + TSI + +F + GT +
Sbjct: 70 CSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRA 129
Query: 332 NRHHISNFKSCFLSTINKLACV 267
++ + FL+ N+LA V
Sbjct: 130 QGQNVIGNEGGFLTAANELARV 151
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.47
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 614 VRGVAMNPVEHPHGG 658
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 36.7 bits (81), Expect = 0.63
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEE-KMXDRGRLARASGNFATVIGHNPDAKRTRVKLP 473
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGG 658
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 584 YKVKRNCWPYVRGVAMNPVEHPHGG 658
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 431
G+ PVGA+P GT++ E K R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 392 TSIXHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 267
T + H + +AHNGTL S R +I+N + L+ +++L V
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGV 60
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPS 476
G+ P+GA+P GT + LE+ + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 688
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 584 YKVKRNCWPYVRGVAMNPVEHPHGGG 661
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio splendidus 12B01
Length = 7629
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -3
Query: 655 TVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHALLLDGRTFLAP 476
TVR + NT Y+ +FD+ LV+ P + Q FVN + + D ++ +D +
Sbjct: 6662 TVRSVDTDADNTEYLGTPTSFDVDLVIDPINDQPIFVNVTNIETSEDISVAIDNFSIYDV 6721
Query: 475 DGSF 464
D +F
Sbjct: 6722 DANF 6725
>UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep:
Protein lozenge - Drosophila melanogaster (Fruit fly)
Length = 826
Score = 33.9 bits (74), Expect = 4.4
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 524 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 673
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response
regulator receiver; n=1; Robiginitalea biformata
HTCC2501|Rep: Regulatory protein, LuxR:Response
regulator receiver - Robiginitalea biformata HTCC2501
Length = 536
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
+G+ + G GR+D P+LKA AY V+ + G + +EH + NH H+G
Sbjct: 356 EGLKELRDGIGRVDAPLLKAQAAYASGLVR-----FAEGNLQDALEHLNEALNHIHVG 408
>UniRef50_Q0TS95 Cluster: L-fuculokinase; n=3; Clostridiales|Rep:
L-fuculokinase - Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A)
Length = 500
Score = 33.1 bits (72), Expect = 7.7
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 339 MPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRAWS 518
+P GTI+ ++ EK+ D ++ + V GH D + V +P+ K + S WS
Sbjct: 212 VPSGTIIGDISEKICDELKIEKC--KVIAVAGH--DTQSALVSVPTTEKDFVFLSCGTWS 267
Query: 519 VLLLEVD 539
+L E+D
Sbjct: 268 LLGTEID 274
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,104,323
Number of Sequences: 1657284
Number of extensions: 17566133
Number of successful extensions: 49033
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 46844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49015
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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