Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1127
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   172   9e-45
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         28   0.36 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.8  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  172 bits (419), Expect = 9e-45
 Identities = 78/83 (93%), Positives = 79/83 (95%)
 Frame = +2

Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
           + MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 163 RAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKA 222

Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
           STVKRGT  GRKVGLIAARRTGR
Sbjct: 223 STVKRGTPPGRKVGLIAARRTGR 245



 Score =  150 bits (363), Expect = 5e-38
 Identities = 65/83 (78%), Positives = 76/83 (91%)
 Frame = +3

Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
           +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK  DRG+LAR SGN+A+VI HNP
Sbjct: 82  MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNP 141

Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
           D KRTRVKLPSGAKKVLPS+NRA
Sbjct: 142 DTKRTRVKLPSGAKKVLPSANRA 164



 Score =  141 bits (342), Expect = 2e-35
 Identities = 64/83 (77%), Positives = 73/83 (87%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
           V+FRDPY+F+  K+LFI  + ++
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMY 83


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 464 KATVWSQEGSAIKQQGMVGIVAGGGRIDKPILKAGRAYHK 583
           K  +W    +A   Q  +G V GG   D  IL  GRAYH+
Sbjct: 73  KQLIWD---TASAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 131 RHGYIKGVVKDIIHDP 178
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 131 RHGYIKGVVKDIIHDP 178
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 635 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 540
           GS  H     SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,933
Number of Sequences: 2352
Number of extensions: 19266
Number of successful extensions: 46
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)