Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1127
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 159 1e-38
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 159 1e-38
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 159 1e-38
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 159 1e-38
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 159 1e-38
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 159 1e-38
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 159 1e-38
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 159 1e-38
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 159 1e-38
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 130 7e-30
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 31 3.4
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 30 7.8
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 30 7.8
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 30 7.8
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 30 7.8
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (343), Expect = 2e-33
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (343), Expect = 2e-33
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (344), Expect = 1e-33
Identities = 64/83 (77%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (343), Expect = 2e-33
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (344), Expect = 1e-33
Identities = 64/83 (77%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (344), Expect = 1e-33
Identities = 64/83 (77%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (343), Expect = 2e-33
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 117 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 176
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 177 STIRRDAPAGRKVGLIAARRTGR 199
Score = 142 bits (343), Expect = 2e-33
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 36 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 95
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 96 ETKKTRVKLPSGSKKVISSANRA 118
Score = 62.9 bits (146), Expect = 1e-09
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +2
Query: 161 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKALH 271
DIIHDPGRGAPLA V FRDPY+FK R ELFI + +H
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIH 37
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 159 bits (385), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 686 STVKRGTSAGRKVGLIAARRTGR 754
ST++R AGRKVGLIAARRTGR
Sbjct: 223 STIRRDAPAGRKVGLIAARRTGR 245
Score = 142 bits (343), Expect = 2e-33
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 138 bits (333), Expect = 3e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 130 bits (313), Expect = 7e-30
Identities = 58/79 (73%), Positives = 67/79 (84%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 215 DPYKFKTRKELFIVPKALH 271
DPY+FK R ELFI + +H
Sbjct: 61 DPYRFKKRTELFIAAEGIH 79
Score = 94.3 bits (224), Expect = 4e-19
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFA 422
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+A
Sbjct: 78 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 600 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPCCLMAEPSW 481
L LT +L+ A P F++ +S+ PPP ++P P + P W
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSP--ISVSPPW 125
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 431
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 431
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 431
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 431
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,308,290
Number of Sequences: 237096
Number of extensions: 2844599
Number of successful extensions: 5450
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5449
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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