Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1126
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.68 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 664 HNSYVIFFFERMCSGLYKIHCLLLF 590
           +N YVIF F     G +  HC  LF
Sbjct: 651 NNGYVIFRFRADNPGYWLFHCHFLF 675


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 370 FVTAKKILHVYLTAVMLKFDPIYLIV 447
           + T + +++++L AVML F  IY+IV
Sbjct: 235 YATLQILVYLHL-AVMLGFQDIYMIV 259


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 370 FVTAKKILHVYLTAVMLKFDPIYLIV 447
           + T + +++++L AVML F  IY+IV
Sbjct: 235 YATLQILVYLHL-AVMLGFQDIYMIV 259


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 625 SGLYKIHCLLLFL 587
           SG+Y ++CLL+ L
Sbjct: 278 SGMYSMYCLLILL 290


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 625 SGLYKIHCLLLFL 587
           SG+Y ++CLL+ L
Sbjct: 278 SGMYSMYCLLILL 290


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 201 GTNAIYIYLYYKWFI 157
           GT  IY+   Y WFI
Sbjct: 40  GTTCIYLTSLYIWFI 54


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 201 GTNAIYIYLYYKWFI 157
           GT  IY+   Y WFI
Sbjct: 40  GTTCIYLTSLYIWFI 54


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 751 DPYCIYTTVYKI 716
           +PYC  ++VYK+
Sbjct: 180 NPYCFNSSVYKV 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,641
Number of Sequences: 336
Number of extensions: 3879
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)