Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1124
(787 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 28 0.097
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 28 0.097
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 28 0.097
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 28 0.097
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 27 0.17
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 27 0.17
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 27 0.17
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 4.8
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 4.8
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 4.8
DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase rever... 21 8.4
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 8.4
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.097
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 595 FCSHQCGGIWQLWILF*PWI 536
F SHQ IW LW+L WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.097
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 595 FCSHQCGGIWQLWILF*PWI 536
F SHQ IW LW+L WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.097
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 595 FCSHQCGGIWQLWILF*PWI 536
F SHQ IW LW+L WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.097
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 595 FCSHQCGGIWQLWILF*PWI 536
F SHQ IW LW+L WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 27.1 bits (57), Expect = 0.17
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 601 QLFCSHQCGGIWQLWILF*PWI 536
Q F SHQ IW +W+L WI
Sbjct: 210 QDFLSHQHAWIWLVWLLSQAWI 231
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 27.1 bits (57), Expect = 0.17
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 601 QLFCSHQCGGIWQLWILF*PWI 536
Q F SHQ IW +W+L WI
Sbjct: 443 QDFLSHQHAWIWLVWLLSQAWI 464
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 27.1 bits (57), Expect = 0.17
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 601 QLFCSHQCGGIWQLWILF*PWI 536
Q F SHQ IW +W+L WI
Sbjct: 443 QDFLSHQHAWIWLVWLLSQAWI 464
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 48 RFFETKGGXLIIKGF 92
RFFE K G ++ +GF
Sbjct: 275 RFFEEKNGKVVWEGF 289
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/30 (26%), Positives = 20/30 (66%)
Frame = +3
Query: 75 LIIKGFPEKIVKLNELLETSNFQNRNLSDV 164
++I+ F + LN+ LET+ Q++++ ++
Sbjct: 191 ILIRSFKSRYKDLNQKLETACEQSKSVEEL 220
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 201 ATSNNEPNAKRQRLDSSEYP 260
A+ + K+QRLD+ +YP
Sbjct: 53 ASHLQQQQLKKQRLDNGDYP 72
>DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 73
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = +1
Query: 655 IRNRYCSLHDIVIKNLEKIKKPRSSNAESLY*AIISLVP 771
+ ++Y S+ +I +KN KK ++ + + ++P
Sbjct: 19 VNSKYNSILNIALKNFRLCKKHKTKKPVQILALLQEIIP 57
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = +1
Query: 655 IRNRYCSLHDIVIKNLEKIKKPRSSNAESLY*AIISLVP 771
+ ++Y S+ +I +KN KK ++ + + ++P
Sbjct: 19 VNSKYNSILNIALKNFRLCKKHKTKKPVQILALLQEIIP 57
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,451
Number of Sequences: 336
Number of extensions: 3867
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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