Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1123
         (296 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   2.4  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   2.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   3.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   5.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   5.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   5.6  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        21   7.4  

>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 90  YVDLLTSGELELGT 49
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 90  YVDLLTSGELELGT 49
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +2

Query: 125  MSLRSCVKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYN 250
            M L++C      +M   L S + +  +++L   FR    +YN
Sbjct: 2391 MILKACTNLKEEMMKQKLFSESADAPVASLSEGFRKALQIYN 2432


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 160 RGGPLHAASQTHHVHTL*NPTS 95
           R  P  A S  HH H+  +PTS
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTS 27


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 160 RGGPLHAASQTHHVHTL*NPTS 95
           R  P  A S  HH H+  +PTS
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTS 27


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +2

Query: 11  VTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAALCSTA 190
           ++G R   +RL    S  SP    S  +R  + Q ++      CV+R+       LCS+ 
Sbjct: 4   LSGKRPSGARLSI--SRGSPTGVYSVRRRWSLCQKLHFRDQVCCVQRSPPHWPYLLCSSC 61

Query: 191 RNM 199
             M
Sbjct: 62  SAM 64


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 91  IRRSFDVRGT*TWHGAEPR*PVPST 17
           +R SF+  GT       PR P P T
Sbjct: 47  LRHSFETDGTPAPSTVRPRPPAPPT 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,117
Number of Sequences: 2352
Number of extensions: 4451
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18688617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)