Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1122
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.59 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   3.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 191 EEHHERPPFVPYEYMRIRTKRSHGVMDRSPFSTTLM 298
           ++H +RPP   +E    R   S G++ R+   T  M
Sbjct: 252 DDHRDRPPRHFHEEHDTRRASSRGIIPRAKIKTVKM 287


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -3

Query: 405 LTFNNLKYMNVLQTNFLKQNYCNLVV 328
           + ++N+    +LQ++ L +NY N ++
Sbjct: 25  IKYDNVNLKEILQSDRLTENYVNCLL 50


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 268 GQKSLFHNPHVNALPSGYEDDH 333
           G + L H+PH+N     Y  +H
Sbjct: 35  GLQGLHHSPHLNHAMHPYHANH 56


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 393 NLKYMNVLQTNFLKQNYCNLVVIFITA 313
           N+KY N+L+T   +  + N     + A
Sbjct: 119 NIKYRNLLETTTRRLAFVNSAYTLVKA 145


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -3

Query: 351 QNYCNLVVIFIT 316
           Q YC+++++F+T
Sbjct: 74  QRYCSVLLVFLT 85


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -3

Query: 351 QNYCNLVVIFIT 316
           Q YC+++++F+T
Sbjct: 70  QRYCSVLLVFLT 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,598
Number of Sequences: 336
Number of extensions: 2561
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)