Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1122
(560 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070648-1|AAL48119.1| 109|Drosophila melanogaster RH03295p pro... 69 4e-12
AE013599-3625|AAF47024.1| 109|Drosophila melanogaster CG17280-P... 69 4e-12
BT023629-1|AAY85029.1| 94|Drosophila melanogaster IP05686p pro... 56 3e-08
AE013599-2139|AAM70935.1| 94|Drosophila melanogaster CG30093-P... 56 3e-08
AE014296-3083|AAF49209.2| 289|Drosophila melanogaster CG14077-P... 36 0.037
AY071185-1|AAL48807.1| 852|Drosophila melanogaster RE23490p pro... 31 0.81
AE014296-2741|AAF49460.2| 852|Drosophila melanogaster CG32159-P... 31 0.81
AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA... 28 9.9
>AY070648-1|AAL48119.1| 109|Drosophila melanogaster RH03295p
protein.
Length = 109
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 YILWKRMSFFVAFPAIALGMLNAYLAHQEEHHE-RPPFVPYEYMRIRTKR 253
Y +WKR+SFFVA PA+ L MLNAYL HQEEH + R FV Y+Y+R R KR
Sbjct: 35 YKVWKRLSFFVAVPAVGLCMLNAYLKHQEEHDKPRQEFVKYDYLRRREKR 84
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 247 KAFPWGDGQKSLFHNPHVNALPSGYE 324
K FPWG+GQKSLFHNPHVNALP GYE
Sbjct: 83 KRFPWGEGQKSLFHNPHVNALPDGYE 108
>AE013599-3625|AAF47024.1| 109|Drosophila melanogaster CG17280-PA
protein.
Length = 109
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 YILWKRMSFFVAFPAIALGMLNAYLAHQEEHHE-RPPFVPYEYMRIRTKR 253
Y +WKR+SFFVA PA+ L MLNAYL HQEEH + R FV Y+Y+R R KR
Sbjct: 35 YKVWKRLSFFVAVPAVGLCMLNAYLKHQEEHDKPRQEFVKYDYLRRREKR 84
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 247 KAFPWGDGQKSLFHNPHVNALPSGYE 324
K FPWG+GQKSLFHNPHVNALP GYE
Sbjct: 83 KRFPWGEGQKSLFHNPHVNALPDGYE 108
>BT023629-1|AAY85029.1| 94|Drosophila melanogaster IP05686p
protein.
Length = 94
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 113 LWKRMSFFVAFPAIALGMLNAYLAHQEEHHERPPFVPYEYMRIRTKR 253
LWKR++F +A PAI L NA+ H +H ER PF YEY+R RTKR
Sbjct: 19 LWKRVTFLLALPAIVLCAANAFTGH--KHVEREPFAKYEYLRRRTKR 63
Score = 54.8 bits (126), Expect = 8e-08
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 247 KAFPWGDGQKSLFHNPHVNALPSGYEDD 330
K FPWGDG +SLFHN VNALP GYED+
Sbjct: 62 KRFPWGDGNRSLFHNAEVNALPEGYEDE 89
>AE013599-2139|AAM70935.1| 94|Drosophila melanogaster CG30093-PA
protein.
Length = 94
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 113 LWKRMSFFVAFPAIALGMLNAYLAHQEEHHERPPFVPYEYMRIRTKR 253
LWKR++F +A PAI L NA+ H +H ER PF YEY+R RTKR
Sbjct: 19 LWKRVTFLLALPAIVLCAANAFTGH--KHVEREPFAKYEYLRRRTKR 63
Score = 54.8 bits (126), Expect = 8e-08
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 247 KAFPWGDGQKSLFHNPHVNALPSGYEDD 330
K FPWGDG +SLFHN VNALP GYED+
Sbjct: 62 KRFPWGDGNRSLFHNAEVNALPEGYEDE 89
>AE014296-3083|AAF49209.2| 289|Drosophila melanogaster CG14077-PA
protein.
Length = 289
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 247 KAFPWGDGQKSLFHNPHVNAL-PSGYEDD 330
K + + DG ++ FHN H NAL P+GYED+
Sbjct: 203 KRYWFKDGNRTAFHNSHFNALPPAGYEDE 231
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 113 LWKRMSFFVAFPAIALGMLNAYLAHQEEHHERPPFVPYEYMRIRTKR 253
LW+++S F P IA+ L + EE ER F YE+M RTKR
Sbjct: 160 LWQKISLFGVLPMIAILTLLVFSTRSEE--ERLEFKNYEHMYRRTKR 204
>AY071185-1|AAL48807.1| 852|Drosophila melanogaster RE23490p
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 210 RHLYLMNTCAFVQSVPMG*WTEVPFPQPSCECPSQ 314
+H+YL+ CA +Q V + + + QP C CPS+
Sbjct: 506 QHIYLLPECA-IQQVCNAVYVRLNYTQPLCACPSR 539
>AE014296-2741|AAF49460.2| 852|Drosophila melanogaster CG32159-PB
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 210 RHLYLMNTCAFVQSVPMG*WTEVPFPQPSCECPSQ 314
+H+YL+ CA +Q V + + + QP C CPS+
Sbjct: 506 QHIYLLPECA-IQQVCNAVYVRLNYTQPLCACPSR 539
>AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA
protein.
Length = 1284
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 313 WEGHSHEGCGKGTSVHHPMGTL 248
W+G + CG ++HPMGT+
Sbjct: 78 WQGPECQFCGGKVRMYHPMGTI 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,162,031
Number of Sequences: 53049
Number of extensions: 439358
Number of successful extensions: 900
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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