Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1120
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.27 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     26   1.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.9  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   7.7  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 279 YSEINEFSFGKEPEVLNCGHFTQIIWR 359
           Y    +F FG+  E +NCG  +  +WR
Sbjct: 106 YDSAMDFQFGEGRECVNCGAISTPLWR 132


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = +1

Query: 64  LEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCGW 228
           LEV +E + +    P + +     +  +W+ +  KR++     +    ES + GW
Sbjct: 562 LEVDDESKEQTYGDPKIEDNPTESVEIEWSLDETKREAKTNVADDTISESEFYGW 616


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 408  LYVVANYYPPGNYSGLF---VKNVLPPGAMQFSSSYKVLLENRTTIWLLLHQTEYL 566
            L+++A+   P   + +    +KN  P   +Q    Y+VL +NR  +W  + +  +L
Sbjct: 1692 LFILASVKAPNTATDIMQRSLKNKCPNTRIQAILRYQVLWKNRFQVWPRMEEGAHL 1747


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 347 LCEMTTVQHFRLLAKGKLIDFAVPFIYAVSSLIFVFGSG 231
           LC++ T++   +  KG L D  V        LI  FG+G
Sbjct: 808 LCDLKTLRVLTINHKGNLNDTEVQKSLPPKFLIHTFGNG 846


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +3

Query: 333 GHFTQIIWRSTSELGIGSAKSKTGKL---YVVANY 428
           GHFTQI    ++++G      K G++   Y V NY
Sbjct: 182 GHFTQIASDRSTKVGCSMWYWKDGQMDVYYFVCNY 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,380
Number of Sequences: 2352
Number of extensions: 14379
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)