Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1120
(758 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26130.1 68418.m03108 pathogenesis-related protein, putative ... 60 1e-09
At4g33730.1 68417.m04789 pathogenesis-related protein, putative ... 58 8e-09
At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protei... 58 8e-09
At4g33720.1 68417.m04788 pathogenesis-related protein, putative ... 56 2e-08
At4g25780.1 68417.m03710 pathogenesis-related protein, putative ... 56 3e-08
At3g19690.1 68416.m02494 pathogenesis-related protein, putative ... 54 1e-07
At4g31470.1 68417.m04471 pathogenesis-related protein, putative ... 54 1e-07
At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1) i... 52 4e-07
At2g14580.1 68415.m01633 pathogenesis-related protein, putative ... 52 4e-07
At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protei... 51 7e-07
At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protei... 50 1e-06
At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1) i... 50 2e-06
At3g09590.1 68416.m01139 pathogenesis-related protein, putative ... 49 4e-06
At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protei... 48 5e-06
At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protei... 48 9e-06
At4g33710.1 68417.m04787 pathogenesis-related protein, putative ... 46 2e-05
At2g19970.1 68415.m02335 pathogenesis-related protein, putative ... 44 1e-04
At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protei... 42 6e-04
At1g50060.1 68414.m05617 pathogenesis-related protein, putative ... 39 0.004
At2g19980.1 68415.m02336 allergen V5/Tpx-1-related family protei... 38 0.005
At4g07820.1 68417.m01237 pathogenesis-related protein, putative ... 33 0.21
At1g50050.1 68414.m05616 pathogenesis-related protein, putative ... 31 0.63
At3g45280.1 68416.m04889 syntaxin 72 (SYP72) identical to syntax... 29 4.4
At2g17650.1 68415.m02042 AMP-dependent synthetase and ligase fam... 28 5.9
At4g31130.1 68417.m04419 expressed protein 28 7.7
At3g16910.1 68416.m02162 AMP-dependent synthetase and ligase fam... 28 7.7
>At5g26130.1 68418.m03108 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 164
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 261 DCVDKWYSEINEFSFGKEP--EVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYP 434
+ V W +E +++ + + CGH+TQ++WR++ +G K G +V NYYP
Sbjct: 95 EAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGCAKVKCDNGGTFVTCNYYP 154
Query: 435 PGNYSG 452
PGNY G
Sbjct: 155 PGNYRG 160
>At4g33730.1 68417.m04789 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 172
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 ARDCVDKWYSEINEFSF-GKEPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYY 431
A V W E + + F CGH+TQ++WR ++ LG G AK G VV NY
Sbjct: 102 AAQAVAMWVHEKSYYDFYSNSCHGPACGHYTQVVWRGSARLGCGKAKCNNGASIVVCNYD 161
Query: 432 PPGNYSG 452
P GNY G
Sbjct: 162 PAGNYIG 168
>At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protein
similar to pathogenesis related protein-1 GB:AAC25629
GI:3290004 from [Zea mays]; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 241
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 258 RDCVDKWYSEINEFSF-GK--EPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVVANY 428
RD V+ W E + G EP+ + CGH+TQI+WR ++++G S G +Y + Y
Sbjct: 149 RDIVNVWADEDKFYDVKGNTCEPQHM-CGHYTQIVWRDSTKVGCASVDCSNGGVYAICVY 207
Query: 429 YPPGNYSG 452
PPGNY G
Sbjct: 208 NPPGNYEG 215
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 34 SKSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGES 213
++ N E L HN R G P + ++ ++ WA + L +S N YGE+
Sbjct: 79 NRVNRASREFLIAHNLVRARVGEPPFQWDGRLAAYARTWANQRVGDCRLVHS-NGPYGEN 137
Query: 214 VYC----GWSP 234
++ WSP
Sbjct: 138 IFWAGKNNWSP 148
>At4g33720.1 68417.m04788 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 163
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 267 VDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYPPG 440
VD W E ++ + + CGH+TQ++WR++ LG + G+ ++ NY PPG
Sbjct: 96 VDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTFITCNYDPPG 155
Query: 441 NYSG 452
N+ G
Sbjct: 156 NWVG 159
>At4g25780.1 68417.m03710 pathogenesis-related protein, putative
similar to gene PR-1 protein - Medicago truncatula,
SP|Q40374; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 190
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 261 DCVDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYP 434
D V W SE + +G CGH+TQI+W+ST +G G +++ NY P
Sbjct: 121 DAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNGGIFMTCNYDP 180
Query: 435 PGNYSG 452
PGNY G
Sbjct: 181 PGNYIG 186
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = +1
Query: 73 HNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQ---RYGESVYCG----WS 231
HN R PL+ ++ + +Q WA + +L +S++ GE++Y G WS
Sbjct: 59 HNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGYGANWS 118
Query: 232 P 234
P
Sbjct: 119 P 119
>At3g19690.1 68416.m02494 pathogenesis-related protein, putative
similar to PR-1a protein GI:19944 GB:X06930 from
[Nicotiana tabacum]; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 161
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 255 ARDCVDKWYSEINEFSFGK----EPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVVA 422
A D + W +E + + +P C H+TQ++W++T LG +G ++
Sbjct: 88 AEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVCNSGGTFITC 147
Query: 423 NYYPPGNYSG 452
NY PPGNY G
Sbjct: 148 NYDPPGNYIG 157
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +1
Query: 28 FTSKSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYG 207
+ S + D + + LE HNE R E G+ PLV + E++ + +A + +L +S N +G
Sbjct: 18 YGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHS-NGPFG 76
Query: 208 ESV 216
E++
Sbjct: 77 ENI 79
>At4g31470.1 68417.m04471 pathogenesis-related protein, putative
similar to pathogenesis related protein-1 from Zea mays
GI:3290004; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 185
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 258 RDCVDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYY 431
RD V W SE+ + N C H+TQ++W+ +S +G + KTG +++ NY
Sbjct: 115 RDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTGDTFIICNYD 174
Query: 432 PPGNYSG 452
PPGN G
Sbjct: 175 PPGNIVG 181
>At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1)
identical to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains an extracellular proteins
SCP/Tpx-1/Ag5/PR-1/Sc7 signature (PDOC00772)
Length = 176
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGK-LYVVANYYPPGNYSG 452
CGH+TQI+WR + LG S + K + ++V+ +Y PPGNY G
Sbjct: 131 CGHYTQIVWRDSVRLGCASVRCKNDEYIWVICSYDPPGNYIG 172
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 58 EALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCGW 228
E L VHN+ R GV P+V N+ ++ +Q +A E A+ ++ +SL +GE++ GW
Sbjct: 44 ETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGP-FGENLAAGW 99
>At2g14580.1 68415.m01633 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 161
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 267 VDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYPPGNY 446
V+ W +E +++ CGH+TQ++WR++ LG + G + NY PPGNY
Sbjct: 96 VNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNY 155
Query: 447 S 449
+
Sbjct: 156 A 156
>At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 210
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGK-LYVVANYYPPGNYSG 452
CGH+TQI+WR T LG + G +++ NY PPGNY G
Sbjct: 165 CGHYTQIVWRETRRLGCARVVCENGAGVFITCNYDPPGNYVG 206
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 40 SNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVY 219
+ FE + L+ HN R G+ PLV + +I+ + WA + SL +S YGE+++
Sbjct: 71 TGSFEQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGP-YGENLF 129
Query: 220 CGWSPDPNTKIKLET 264
G D + +E+
Sbjct: 130 WGSGSDFTSTFAVES 144
>At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protein
low similarity to SP|Q40374 Pathogenesis-related protein
PR-1 precursor {Medicago truncatula}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 207
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGK-LYVVANYYPPGNYSG 452
CGH+TQ++WR T LG + G +++ NY PPGNY G
Sbjct: 162 CGHYTQMVWRDTKRLGCARVVCENGAGVFITCNYDPPGNYVG 203
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 64 LEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCG----WS 231
L+ HN R G+ PL+ + +++ + WA + SL +S YGE+++ G W+
Sbjct: 76 LDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGP-YGENLFWGSGSSWA 134
Query: 232 P 234
P
Sbjct: 135 P 135
>At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1)
identical to GB:M90508 SP|P33154
Length = 161
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 267 VDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYPPGNY 446
V+ W SE +++ CGH+TQ++WR + LG + G + NY P GNY
Sbjct: 96 VNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNY 155
>At3g09590.1 68416.m01139 pathogenesis-related protein, putative
similar to SP|Q05968 Pathogenesis-related protein 1
precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 186
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGKLY-VVANYYPPGNYSG 452
CGH+TQ++WR T+ +G K G+ Y VV Y P GNY G
Sbjct: 141 CGHYTQMVWRETTAVGCARVKCHNGRGYLVVCEYDPRGNYEG 182
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +1
Query: 13 TMSRLFT-SKSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYS 189
T +RL ++ E L+ HN+ R GV L ++++++ + KWA++ S+ +S
Sbjct: 36 TAARLVNRARRAKLSREFLQAHNDARVSSGVPTLGWDRDLARFADKWAKQRKSDCSMIHS 95
Query: 190 LNQRYGESVYC-----GWSPD 237
YGE+++ WSP+
Sbjct: 96 -GGPYGENIFWHRRKKTWSPE 115
>At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protein
low similarity to SP|Q05968 Pathogenesis-related protein
1 precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 205
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 258 RDCVDKWYSEINEFSFGKEP--EVLNCGHFTQIIWRSTSELGIGSAKSKTGK-LYVVANY 428
R VDKW E + CGH+TQI+WR+T+ +G +K + V+ Y
Sbjct: 122 RRVVDKWMDESLNYDRVANTCKSGAMCGHYTQIVWRTTTAVGCARSKCDNNRGFLVICEY 181
Query: 429 YPPGNYSG 452
P GNY G
Sbjct: 182 SPSGNYEG 189
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 37 KSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESV 216
+ N E L HN R G S L ++ +++ + KWA++ K D YGE++
Sbjct: 52 RRNKQSAEFLLAHNAARVASGASNLRWDQGLARFASKWAKQ-RKSDCKMTHSGGPYGENI 110
Query: 217 Y 219
+
Sbjct: 111 F 111
>At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 161
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 276 WYSEINEFSFGKEP-EVLNCGHFTQIIWRSTSELGIGSA-KSKTGKLYVVANYYPPGNYS 449
W SE +++ CGH+TQI+W++T ++G + G +++ NY PPGN+
Sbjct: 97 WLSEARSYNYRSNSCNSEMCGHYTQIVWKNTQKIGCAHVICNGGGGVFLTCNYDPPGNFL 156
Query: 450 G 452
G
Sbjct: 157 G 157
>At4g33710.1 68417.m04787 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 166
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYPPGNYSG 452
CGH+TQ++W+++ +G K G +V NY PGN G
Sbjct: 122 CGHYTQVVWKNSEWVGCAKVKCDNGGTFVTCNYSHPGNVRG 162
>At2g19970.1 68415.m02335 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +1
Query: 58 EALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQR----YGESVYCG 225
+ L+VHN+ R GV+PL NK ++ +QK+A AK YS + YGE++ G
Sbjct: 37 KTLKVHNQIRAAVGVAPLKWNKTVAAYAQKFANRQAKAGVCDYSSMRHSDGPYGENIAAG 96
Query: 226 W 228
W
Sbjct: 97 W 97
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGKL-YVVANYYP 434
CGH+TQ++ + LG GS + +L Y+V NYYP
Sbjct: 131 CGHYTQMVANQSLSLGCGSFRCHENELIYIVCNYYP 166
>At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protein
contains similarity to SP|Q41495 STS14 protein precursor
{Solanum tuberosum}; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 185
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 267 VDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSELGIGSAK-SKTGKLYVVANYYPP 437
V+ W E +++ + N CG + Q++WR++ ELG A +K + + Y PP
Sbjct: 117 VETWVKEKPFYNYKSDTCAANHTCGVYKQVVWRNSKELGCAQATCTKESTVLTICFYNPP 176
Query: 438 GNYSG 452
GN G
Sbjct: 177 GNVIG 181
>At1g50060.1 68414.m05617 pathogenesis-related protein, putative
similar to prb-1b [Nicotiana tabacum] GI:19970; contains
Pfam profile PF00188: SCP-like extracellular protein
Length = 161
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYPPGNYSG 452
C H+TQ++WR + ++G + +V NY PGN+ G
Sbjct: 117 CLHYTQVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVG 157
>At2g19980.1 68415.m02336 allergen V5/Tpx-1-related family protein
low similarity to SP|P33154 Pathogenesis-related protein
1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 165
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 276 WYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGIGSAKS-KTGKLYVVANYYP 434
W++E +++ CGH+TQI+ ++ LG G+ + K ++VV NY P
Sbjct: 101 WFTEKPYYNYATNKCSEPCGHYTQIVANQSTHLGCGTVRCFKNEYVWVVCNYAP 154
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 34 SKSNDFEN-EALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGE 210
S+ +D + E L VHN+ R +++++ +Q++A ++ ++ YS + YGE
Sbjct: 28 SRMDDLQPAETLAVHNQIR--------AADQKLAAHAQRYANVRSQDCAMKYSTDGTYGE 79
Query: 211 SVYCGW 228
++ GW
Sbjct: 80 NIAAGW 85
>At4g07820.1 68417.m01237 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 160
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 37 KSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESV 216
K+ D + HN R GVSPL+ ++ ++ +Q +AE+ +RD + YGE++
Sbjct: 24 KAQDQPQDYFNAHNRARVSVGVSPLMWSQTLTAYAQAYAEK--RRDCGLFLSGGPYGETI 81
>At1g50050.1 68414.m05616 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1b precursor
(pr-1b) GB:X03465 GI:19977 from [Nicotiana tabacum];
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 226
Score = 31.5 bits (68), Expect = 0.63
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 330 CGHFTQIIWRSTSELGIGSAKSKTGKLYVVANY 428
C H+TQ++W ++ ++G G +V NY
Sbjct: 118 CKHYTQVVWSNSVKIGCARVLCNNGGYFVGCNY 150
>At3g45280.1 68416.m04889 syntaxin 72 (SYP72) identical to syntaxin
of plants 72 (SYP72) (GI:13811650)[Arabidopsis
thaliana]; identified as SYP72 in Sanderfoot, A.A., et
al, Plant Physiology 124:1558-69(2000); syntaxin 8 -
Homo sapiens, EMBL:AF115323
Length = 267
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 19 SRLFTSKSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLA 183
SRLFTS +D E + ++ + + +N E+ + + AE++ K LA
Sbjct: 37 SRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLA 91
>At2g17650.1 68415.m02042 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to cDNA adenosine monophosphate
binding protein 2 AMPBP2 (AMPBP2) GI:20799712
Length = 603
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 154 EELAKRDSLAYSLNQRYGESVYCGWSPD 237
EEL S Y L + YG +C W P+
Sbjct: 376 EELGFNVSHLYGLTETYGPGTHCVWKPE 403
>At4g31130.1 68417.m04419 expressed protein
Length = 195
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 KGQ*VDYSPLNRTTSKTKHWK-SIMNTDESMAFRLW*SIKKSVKLVRNGLRNLLKETVSP 184
KG+ V S L ++TS + + +++ + +++ LW +I + + L RN RNL ET P
Sbjct: 79 KGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQLHLTRNVHRNL--ETSCP 136
Query: 185 TV*T 196
T T
Sbjct: 137 TAKT 140
>At3g16910.1 68416.m02162 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to cDNA adenosine monophosphate
binding protein 7 AMPBP7 (AMPBP7) GI:20799722
Length = 569
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Frame = +1
Query: 184 YSLNQRYGESVYCGWSPD-----PNTKIKL 258
Y L++ YG S C W P+ P T+ KL
Sbjct: 343 YGLSETYGPSTVCAWKPEWDSLPPETQAKL 372
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,955,920
Number of Sequences: 28952
Number of extensions: 325374
Number of successful extensions: 946
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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