Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1119
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4812 Cluster: PREDICTED: similar to ENSANGP000...    33   7.2  
UniRef50_A3S379 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_UPI00015B4812 Cluster: PREDICTED: similar to
           ENSANGP00000012576; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000012576 - Nasonia
           vitripennis
          Length = 667

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 45  YCLF*ICALFFGRFYERIEIFSESFRTFQFQCSKF 149
           YCLF IC +F   + +R+ IF+ S+    + C  F
Sbjct: 134 YCLFKICIIFREPYVDRLTIFASSYVILIYSCRTF 168


>UniRef50_A3S379 Cluster: Putative uncharacterized protein; n=1;
           Prochlorococcus marinus str. MIT 9211|Rep: Putative
           uncharacterized protein - Prochlorococcus marinus str.
           MIT 9211
          Length = 872

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +3

Query: 420 LKIKYISNKNICIDNSLPGYSN*IKKNLSRRPRKLHLLSIPI 545
           +K+KY+S+KNI     L  YS  +K  L+R  + L+ LSIP+
Sbjct: 1   MKVKYLSSKNI-----LAKYSLYLKSKLNRNRKLLYFLSIPL 37


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,342,579
Number of Sequences: 1657284
Number of extensions: 10251838
Number of successful extensions: 22798
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22786
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)