Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1119
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    27   0.15 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.4  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 498 NLSRRP-RKLHLLSIPITKSYLTDDIRCYV 584
           N  R+P +KLHL + PI+K      + CY+
Sbjct: 499 NRVRKPTKKLHLKNSPISKKVRPPQVLCYI 528


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 196 TSRMCHIVMLVLIDDRSLKVSTSSFMCNNKQCK 294
           T ++C + M+   D    KV     +CNN  C+
Sbjct: 130 TGKVCDVEMVSCKDAALRKVVPLKKLCNNGTCE 162


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 77  WEIL*ENRNLFRIFSNISISMFEI 148
           W I     N FR +SN S+ +F+I
Sbjct: 58  WSIF-NKWNQFRSYSNFSVFLFDI 80


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 496 KIFLDGRENCTFYLFQL 546
           KI LD  +NC  Y+F L
Sbjct: 190 KIVLDMGKNCVTYVFDL 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,157
Number of Sequences: 336
Number of extensions: 3112
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)