Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1119
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p pro...    31   2.1  
AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p pro...    31   2.1  
AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,...    31   2.1  
AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,...    31   2.1  
AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,...    31   2.1  
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P...    29   4.9  

>BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p protein.
          Length = 1044

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 417  ILKIKYISNKNICIDNSLPGYSN*IKKNLSRRPRKLHLLSI 539
            ++ I Y   K +   + +P Y    ++NL + PRKL LLS+
Sbjct: 982  VISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLLSV 1022


>AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p protein.
          Length = 1032

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 417  ILKIKYISNKNICIDNSLPGYSN*IKKNLSRRPRKLHLLSI 539
            ++ I Y   K +   + +P Y    ++NL + PRKL LLS+
Sbjct: 970  VISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLLSV 1010


>AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,
            isoform B protein.
          Length = 1032

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 417  ILKIKYISNKNICIDNSLPGYSN*IKKNLSRRPRKLHLLSI 539
            ++ I Y   K +   + +P Y    ++NL + PRKL LLS+
Sbjct: 970  VISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLLSV 1010


>AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,
            isoform A protein.
          Length = 1032

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 417  ILKIKYISNKNICIDNSLPGYSN*IKKNLSRRPRKLHLLSI 539
            ++ I Y   K +   + +P Y    ++NL + PRKL LLS+
Sbjct: 970  VISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLLSV 1010


>AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,
            isoform C protein.
          Length = 1044

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 417  ILKIKYISNKNICIDNSLPGYSN*IKKNLSRRPRKLHLLSI 539
            ++ I Y   K +   + +P Y    ++NL + PRKL LLS+
Sbjct: 982  VISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLLSV 1022


>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
           protein.
          Length = 2282

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 196 TSRMCHIVMLVLIDDRSLKV-STSSFMCNNKQCKKSDVCDVDE 321
           +SR C          RS K  +T S +C N QCK+SD  + DE
Sbjct: 603 SSRSCSCCSRTSSRKRSAKKPTTKSQVCENCQCKRSDAKNQDE 645


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,703,618
Number of Sequences: 53049
Number of extensions: 455990
Number of successful extensions: 816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)