Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1118
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   3.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +1

Query: 4   TFIVFVVCVVLAQALTDEQKENLKKHRADCLSEKKADEQLVNKLKTGDFKT 156
           T++  V  ++L +  T  + + + ++  DC+ +K    +   KLK G  +T
Sbjct: 15  TYVSSVEYLILREIDTILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITET 65


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 470 IMIISENIAILYGLLF 517
           ++I++ N+ +LY LLF
Sbjct: 36  VIIVAGNVGVLYTLLF 51


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 513 YSNFNLYLFGKFCLVVVT 566
           YSNF+++LF    +V +T
Sbjct: 70  YSNFSVFLFDIITIVTLT 87


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +1

Query: 31  VLAQALTDEQKENLKKHRADCLSEKKA 111
           ++ Q + DE++++  KH A  L+E+ +
Sbjct: 121 IVPQNVLDEEEKSSTKHYAALLTERSS 147


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 326 PSPNSLELCEMLPRERPEA 382
           P  N  E   + PRERP A
Sbjct: 302 PGQNPGEKTNIAPRERPRA 320


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 327 PHQTAWNYVKCYHEKDPKHALFL*THNPTQPFHT 428
           PH+    Y +C H K  + A       P   FHT
Sbjct: 484 PHELCDKYYRCVHGKPTEFAC-----RPGTVFHT 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,762
Number of Sequences: 336
Number of extensions: 3310
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)