SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1118
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain ...    31   5.1  
AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin li...    31   5.1  
AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein.             31   5.1  
BC117198-1|AAI17199.1| 1572|Homo sapiens HECT, C2 and WW domain ...    30   6.7  
BC117194-1|AAI17195.1| 1572|Homo sapiens HECT, C2 and WW domain ...    30   6.7  
AB037722-1|BAA92539.1| 1581|Homo sapiens KIAA1301 protein protein.     30   6.7  
M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein.             30   8.9  
BC036103-1|AAH36103.1|  772|Homo sapiens DMD protein protein.          30   8.9  
AL451144-5|CAI39567.1|  719|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL451144-1|CAI39563.1|  772|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL096699-3|CAI42226.1|  719|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL096699-1|CAI42224.1|  772|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL050305-1|CAI42099.1|  772|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL049643-1|CAI43007.1|  719|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL031542-3|CAI42230.1|  719|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular dy...    30   8.9  
AL031542-1|CAI42228.1|  772|Homo sapiens dystrophin (muscular dy...    30   8.9  

>BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain
            containing E3 ubiquitin protein ligase 1 protein.
          Length = 1606

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -3

Query: 174  LQWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1
            L+WF FS ++  L  +HQ    +LL       F + LL L C+    +  D+E  +SL
Sbjct: 1338 LEWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSL 1391


>AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin ligase
            1 protein.
          Length = 1585

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -3

Query: 174  LQWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1
            L+WF FS ++  L  +HQ    +LL       F + LL L C+    +  D+E  +SL
Sbjct: 1317 LEWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSL 1370


>AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein.
          Length = 1614

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -3

Query: 174  LQWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1
            L+WF FS ++  L  +HQ    +LL       F + LL L C+    +  D+E  +SL
Sbjct: 1346 LEWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSL 1399


>BC117198-1|AAI17199.1| 1572|Homo sapiens HECT, C2 and WW domain
            containing E3 ubiquitin protein ligase 2 protein.
          Length = 1572

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 171  QWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1
            +WF FS ++  L  +HQ    +LL       F + LL ++C+    +  D+E  +SL
Sbjct: 1305 EWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSL 1357


>BC117194-1|AAI17195.1| 1572|Homo sapiens HECT, C2 and WW domain
            containing E3 ubiquitin protein ligase 2 protein.
          Length = 1572

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 171  QWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1
            +WF FS ++  L  +HQ    +LL       F + LL ++C+    +  D+E  +SL
Sbjct: 1305 EWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSL 1357


>AB037722-1|BAA92539.1| 1581|Homo sapiens KIAA1301 protein protein.
          Length = 1581

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 171  QWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1
            +WF FS ++  L  +HQ    +LL       F + LL ++C+    +  D+E  +SL
Sbjct: 1314 EWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSL 1366


>M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>BC036103-1|AAH36103.1|  772|Homo sapiens DMD protein protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 624 KNKSVTQKTEAW 635


>AL451144-5|CAI39567.1|  719|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 628 KNKSVTQKTEAW 639


>AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>AL451144-1|CAI39563.1|  772|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 624 KNKSVTQKTEAW 635


>AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>AL096699-3|CAI42226.1|  719|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 628 KNKSVTQKTEAW 639


>AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>AL096699-1|CAI42224.1|  772|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 624 KNKSVTQKTEAW 635


>AL050305-1|CAI42099.1|  772|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 624 KNKSVTQKTEAW 635


>AL049643-1|CAI43007.1|  719|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 628 KNKSVTQKTEAW 639


>AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>AL031542-3|CAI42230.1|  719|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 628 KNKSVTQKTEAW 639


>AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 3685

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 632 KNKSVTQKTEAW 643


>AL031542-1|CAI42228.1|  772|Homo sapiens dystrophin (muscular
           dystrophy, Duchenne and Becker types) protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 94  LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273
           LSEK   E  VNK+ T  FK +NE L       ++K+ L  K     K  +L + L+   
Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623

Query: 274 N*K*RS*LTLAW 309
             K  +  T AW
Sbjct: 624 KNKSVTQKTEAW 635


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,213,497
Number of Sequences: 237096
Number of extensions: 1914057
Number of successful extensions: 4143
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4140
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -