BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1118 (686 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain ... 31 5.1 AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin li... 31 5.1 AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein. 31 5.1 BC117198-1|AAI17199.1| 1572|Homo sapiens HECT, C2 and WW domain ... 30 6.7 BC117194-1|AAI17195.1| 1572|Homo sapiens HECT, C2 and WW domain ... 30 6.7 AB037722-1|BAA92539.1| 1581|Homo sapiens KIAA1301 protein protein. 30 6.7 M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein. 30 8.9 BC036103-1|AAH36103.1| 772|Homo sapiens DMD protein protein. 30 8.9 AL451144-5|CAI39567.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.9 AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.9 AL451144-1|CAI39563.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.9 AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.9 AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.9 AL096699-3|CAI42226.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.9 AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.9 AL096699-1|CAI42224.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.9 AL050305-1|CAI42099.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.9 AL049643-1|CAI43007.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.9 AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.9 AL031542-3|CAI42230.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.9 AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.9 AL031542-1|CAI42228.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.9 >BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein. Length = 1606 Score = 30.7 bits (66), Expect = 5.1 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 174 LQWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1 L+WF FS ++ L +HQ +LL F + LL L C+ + D+E +SL Sbjct: 1338 LEWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSL 1391 >AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin ligase 1 protein. Length = 1585 Score = 30.7 bits (66), Expect = 5.1 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 174 LQWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1 L+WF FS ++ L +HQ +LL F + LL L C+ + D+E +SL Sbjct: 1317 LEWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSL 1370 >AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein. Length = 1614 Score = 30.7 bits (66), Expect = 5.1 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 174 LQWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1 L+WF FS ++ L +HQ +LL F + LL L C+ + D+E +SL Sbjct: 1346 LEWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSL 1399 >BC117198-1|AAI17199.1| 1572|Homo sapiens HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein. Length = 1572 Score = 30.3 bits (65), Expect = 6.7 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -3 Query: 171 QWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1 +WF FS ++ L +HQ +LL F + LL ++C+ + D+E +SL Sbjct: 1305 EWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSL 1357 >BC117194-1|AAI17195.1| 1572|Homo sapiens HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein. Length = 1572 Score = 30.3 bits (65), Expect = 6.7 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -3 Query: 171 QWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1 +WF FS ++ L +HQ +LL F + LL ++C+ + D+E +SL Sbjct: 1305 EWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSL 1357 >AB037722-1|BAA92539.1| 1581|Homo sapiens KIAA1301 protein protein. Length = 1581 Score = 30.3 bits (65), Expect = 6.7 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -3 Query: 171 QWFVFSLKVACLQFVHQLFISFLLGETVCSVFLQVLLLLICEGLSQDNADDEHDKSL 1 +WF FS ++ L +HQ +LL F + LL ++C+ + D+E +SL Sbjct: 1314 EWFRFSGRILGLALIHQ----YLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSL 1366 >M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >BC036103-1|AAH36103.1| 772|Homo sapiens DMD protein protein. Length = 772 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 624 KNKSVTQKTEAW 635 >AL451144-5|CAI39567.1| 719|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 719 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 628 KNKSVTQKTEAW 639 >AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >AL451144-1|CAI39563.1| 772|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 772 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 624 KNKSVTQKTEAW 635 >AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >AL096699-3|CAI42226.1| 719|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 719 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 628 KNKSVTQKTEAW 639 >AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >AL096699-1|CAI42224.1| 772|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 772 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 624 KNKSVTQKTEAW 635 >AL050305-1|CAI42099.1| 772|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 772 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 624 KNKSVTQKTEAW 635 >AL049643-1|CAI43007.1| 719|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 719 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 628 KNKSVTQKTEAW 639 >AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >AL031542-3|CAI42230.1| 719|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 719 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 571 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 627 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 628 KNKSVTQKTEAW 639 >AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 3685 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 575 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 631 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 632 KNKSVTQKTEAW 643 >AL031542-1|CAI42228.1| 772|Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) protein. Length = 772 Score = 29.9 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +1 Query: 94 LSEKKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKCLMLKT 273 LSEK E VNK+ T FK +NE L ++K+ L K K +L + L+ Sbjct: 567 LSEK---EDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTL 623 Query: 274 N*K*RS*LTLAW 309 K + T AW Sbjct: 624 KNKSVTQKTEAW 635 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 91,213,497 Number of Sequences: 237096 Number of extensions: 1914057 Number of successful extensions: 4143 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4007 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4140 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7839245960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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