Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1117
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 273 YIYS*INKHHYFILSINY 326
           Y Y  I +H Y ++S++Y
Sbjct: 21  YCYKTIKQHIYSLISLSY 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 167 VPQQLQH*NNRMRWFVCFT 111
           VP+     N   RW++C+T
Sbjct: 27  VPKITSTNNEVPRWYICYT 45


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 273 YIYS*INKHHYFILSINY 326
           Y Y  I +H Y ++S++Y
Sbjct: 21  YCYKTIKQHIYSLISLSY 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,545
Number of Sequences: 336
Number of extensions: 2188
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)