Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1116
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    26   1.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    26   1.2  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         26   1.2  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      25   2.8  
AY341224-1|AAR13788.1|  287|Anopheles gambiae TOLL9 protein.           24   4.9  
AY341223-1|AAR13787.1|  287|Anopheles gambiae TOLL9 protein.           24   4.9  
AY341222-1|AAR13786.1|  287|Anopheles gambiae TOLL9 protein.           24   4.9  
AY341221-1|AAR13785.1|  287|Anopheles gambiae TOLL9 protein.           24   4.9  
AY341220-1|AAR13784.1|  287|Anopheles gambiae TOLL9 protein.           24   4.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.9  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           24   4.9  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    24   6.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.6  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.6  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.6  

>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 499 CSTSSMFCIMMRCTSPSCGARC 434
           C T    C   +CTSP+CGA C
Sbjct: 3   CKTCVADC---KCTSPNCGAGC 21


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -2

Query: 646 HNHEHDNGSGG-HLHQHRLRVEIRG 575
           H H H +G GG H H H     +RG
Sbjct: 421 HLHNHRSGGGGRHHHHHHHSALVRG 445


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 799 YSLIQNRVFAHSYFGLTATICICCCVN 719
           +S I  R+    Y   + T+C+C CV+
Sbjct: 39  FSRIFRRLLTKPYLSGSGTLCVCVCVD 65


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 508 APLCSTSSMFCIM-MRCTSPSCGARC 434
           APL + S    +  + CT+P+C A+C
Sbjct: 49  APLVAQSRSAMVQTLTCTNPTCSAQC 74


>AY341224-1|AAR13788.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 92  LCLSERHFNFKYGV--NDYDCKSRRR 163
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341223-1|AAR13787.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 92  LCLSERHFNFKYGV--NDYDCKSRRR 163
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341222-1|AAR13786.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 92  LCLSERHFNFKYGV--NDYDCKSRRR 163
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341221-1|AAR13785.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 92  LCLSERHFNFKYGV--NDYDCKSRRR 163
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AY341220-1|AAR13784.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 92  LCLSERHFNFKYGV--NDYDCKSRRR 163
           LCL ER F   YG+  N   C  R R
Sbjct: 236 LCLHERDFEVGYGILENIISCMDRSR 261


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 506  SILSE-LDTKTQNLSMMSQKYRKDATYLNTKSMLVKVTA 619
            SIL E L+    NLS++ +  +K   YL   ++L ++TA
Sbjct: 1073 SILEEKLNANKPNLSVIDEFLKKREAYLMRVAVLEEITA 1111


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 92  LCLSERHFNFKYGV--NDYDCKSRRR 163
           LCL ER F   YG+  N   C  R R
Sbjct: 463 LCLHERDFEVGYGILENIISCMDRSR 488


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = -2

Query: 718 YKSRSFP--RDKP*LSWNHLENPEVKH 644
           ++ R FP  R KP L + H+E  + KH
Sbjct: 29  WRDRCFPYTRQKPHLLYGHMEQFQSKH 55


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 177 QPKAARRRLLQS*S-LTPYLKLKCLSLK 97
           +PK   + LL S + L+PYL+  CLS +
Sbjct: 237 RPKMTPQSLLASQTGLSPYLRFGCLSTR 264


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -3

Query: 579 VASFRYFCDIIDRFCVFV 526
           ++ +++   ++DRFC+FV
Sbjct: 451 ISDWKFAAMVVDRFCLFV 468


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -3

Query: 579 VASFRYFCDIIDRFCVFV 526
           ++ +++   ++DRFC+FV
Sbjct: 451 ISDWKFAAMVVDRFCLFV 468


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,152
Number of Sequences: 2352
Number of extensions: 13355
Number of successful extensions: 35
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)