BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1114 (756 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 151 2e-35 UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 151 2e-35 UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 150 4e-35 UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 137 3e-31 UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 130 2e-30 UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 118 1e-25 UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 114 2e-24 UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 113 6e-24 UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 108 1e-22 UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 106 5e-22 UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 98 2e-19 UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 82 1e-14 UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 63 6e-09 UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 63 8e-09 UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 60 8e-08 UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 58 2e-07 UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 55 2e-06 UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 54 3e-06 UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 54 5e-06 UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 54 5e-06 UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 52 1e-05 UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 51 3e-05 UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 49 1e-04 UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 47 6e-04 UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 46 0.001 UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 45 0.002 UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 45 0.002 UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 44 0.003 UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 43 0.009 UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 41 0.038 UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 38 0.27 UniRef50_Q890E3 Cluster: Acetyltransferase (GNAT) family; n=1; L... 37 0.47 UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 36 1.1 UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 35 1.9 UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium tu... 35 1.9 UniRef50_A7EFC4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9 UniRef50_A6SQK8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8 UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 33 5.8 UniRef50_Q3W9H9 Cluster: Short-chain dehydrogenase/reductase SDR... 33 7.6 UniRef50_A6E8K7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6 UniRef50_Q18ED9 Cluster: Cell surface calcium-binding acidic-rep... 33 7.6 >UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal protein S4 - Entamoeba histolytica HM-1:IMSS Length = 326 Score = 151 bits (365), Expect = 2e-35 Identities = 98/243 (40%), Positives = 128/243 (52%), Gaps = 11/243 (4%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 MARGP+ HLKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G E Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60 Query: 218 VL*IVKQRLIKVVGKXXXXXXXXXXXXXXXXXRRLMNCFD*SMMLRADSQSTVSPLRRLS 397 V IVK R IK+ GK R F +M + + P L+ Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENF--RLMYNTKRRFCLVP---LT 115 Query: 398 TSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTFHPVRHCNYED---YGLHQV*VR 568 K + + + R+ T A I TH ++ +P D L + Sbjct: 116 AEQAKFKLCKIEKRVLGT-----GAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIV 170 Query: 569 ELV-YDHGRP*LGARGHIVSR-------ERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 724 + V +D G + G+ + R E HPGSF+IVHIKD+ G+TF TRLNNVF+IGK Sbjct: 171 DFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGK 230 Query: 725 GTK 733 GT+ Sbjct: 231 GTE 233 Score = 110 bits (264), Expect = 4e-23 Identities = 47/84 (55%), Positives = 63/84 (75%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK+++ G Sbjct: 74 GKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGT 133 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 +PY+VTHDGRTIRYP P ++ N Sbjct: 134 GAIPYIVTHDGRTIRYPHPELQAN 157 Score = 48.8 bits (111), Expect = 1e-04 Identities = 20/42 (47%), Positives = 30/42 (71%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 P Q+ +I+L++ T KI+DF+KF+ GN M+ GG +GRVG Sbjct: 152 PELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVG 193 >UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=137; Eukaryota|Rep: 40S ribosomal protein S4, X isoform - Homo sapiens (Human) Length = 263 Score = 151 bits (365), Expect = 2e-35 Identities = 66/84 (78%), Positives = 74/84 (88%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 K +P+LVTHD RTIRYPDPLIKVN Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157 Score = 132 bits (318), Expect = 1e-29 Identities = 61/75 (81%), Positives = 66/75 (88%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60 Query: 218 VL*IVKQRLIKVVGK 262 V I QR IK+ GK Sbjct: 61 VKKICMQRFIKIDGK 75 Score = 73.7 bits (173), Expect = 4e-12 Identities = 30/45 (66%), Positives = 39/45 (86%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233 Score = 60.9 bits (141), Expect = 3e-08 Identities = 25/42 (59%), Positives = 33/42 (78%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193 >UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila melanogaster (Fruit fly) Length = 261 Score = 150 bits (363), Expect = 4e-35 Identities = 65/84 (77%), Positives = 73/84 (86%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 K VP+LVTHDGRTIRYPDPLI N Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHAN 157 Score = 134 bits (325), Expect = 2e-30 Identities = 64/75 (85%), Positives = 67/75 (89%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60 Query: 218 VL*IVKQRLIKVVGK 262 V IV QRL+KV GK Sbjct: 61 VTKIVMQRLVKVDGK 75 Score = 79.8 bits (188), Expect = 7e-14 Identities = 36/45 (80%), Positives = 38/45 (84%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 LG G +V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233 Score = 68.5 bits (160), Expect = 2e-10 Identities = 30/43 (69%), Positives = 36/43 (83%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617 P + S+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194 >UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis thaliana (Mouse-ear cress) Length = 262 Score = 137 bits (331), Expect = 3e-31 Identities = 62/84 (73%), Positives = 69/84 (82%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+ + G Sbjct: 74 GKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQ 133 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 K +PYL T+DGRTIRYPDPLIK N Sbjct: 134 KGIPYLNTYDGRTIRYPDPLIKPN 157 Score = 121 bits (291), Expect = 2e-26 Identities = 56/75 (74%), Positives = 64/75 (85%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT E Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60 Query: 218 VL*IVKQRLIKVVGK 262 V+ I+ QR I+V GK Sbjct: 61 VISILMQRHIQVDGK 75 Score = 66.5 bits (155), Expect = 7e-10 Identities = 29/44 (65%), Positives = 35/44 (79%) Frame = +2 Query: 602 GARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 G G I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTK 233 Score = 52.0 bits (119), Expect = 2e-05 Identities = 22/42 (52%), Positives = 31/42 (73%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 P + +I+LD+ KI++FIKF+ GN+ M+TGGRN GRVG Sbjct: 152 PLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVG 193 >UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein S4, X isoform (LOC126235), mRNA; n=1; Takifugu rubripes|Rep: similar to 40S ribosomal protein S4, X isoform (LOC126235), mRNA - Takifugu rubripes Length = 291 Score = 130 bits (313), Expect = 5e-29 Identities = 60/74 (81%), Positives = 65/74 (87%) Frame = +2 Query: 41 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 220 ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61 Query: 221 L*IVKQRLIKVVGK 262 I QR IK+ GK Sbjct: 62 KKICMQRFIKIDGK 75 Score = 86.6 bits (205), Expect(2) = 2e-30 Identities = 39/47 (82%), Positives = 42/47 (89%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 396 GKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK Sbjct: 74 GKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120 Score = 77.0 bits (181), Expect = 5e-13 Identities = 32/45 (71%), Positives = 40/45 (88%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 LG G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K Sbjct: 221 LGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 265 Score = 68.9 bits (161), Expect(2) = 2e-30 Identities = 28/38 (73%), Positives = 33/38 (86%) Frame = +1 Query: 394 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 507 +YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVN Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVN 189 Score = 55.2 bits (127), Expect = 2e-06 Identities = 21/42 (50%), Positives = 32/42 (76%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 P + ++++D+ T KI DFIKF++ N+CM+TGG NLGR+G Sbjct: 184 PLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTGGANLGRIG 225 >UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED: similar to 40S ribosomal protein S4, X isoform - Canis familiaris Length = 240 Score = 118 bits (285), Expect = 1e-25 Identities = 55/75 (73%), Positives = 61/75 (81%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 MA P+KHLK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E Sbjct: 1 MAHSPRKHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60 Query: 218 VL*IVKQRLIKVVGK 262 V I Q IK+ GK Sbjct: 61 VKKIRMQHFIKMDGK 75 Score = 93.1 bits (221), Expect = 7e-18 Identities = 39/54 (72%), Positives = 46/54 (85%) Frame = +1 Query: 346 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 507 D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+N Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMN 129 Score = 69.7 bits (163), Expect = 7e-11 Identities = 28/43 (65%), Positives = 37/43 (86%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 727 LG G I +RE HPGSFD+VH+KD+ G++FATRL+N+F+IGKG Sbjct: 161 LGRIGVITNRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKG 203 Score = 59.7 bits (138), Expect = 8e-08 Identities = 24/42 (57%), Positives = 32/42 (76%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 P + +IQ+D+ T KI DF KF++GNLCM+TGG NLGR+G Sbjct: 124 PLIKMNDTIQIDLETGKITDFFKFDTGNLCMVTGGTNLGRIG 165 >UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing protein; n=1; Tetrahymena thermophila SB210|Rep: Ribosomal family S4e containing protein - Tetrahymena thermophila SB210 Length = 370 Score = 114 bits (275), Expect = 2e-24 Identities = 50/83 (60%), Positives = 62/83 (74%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVR D YP G MDVV IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP Sbjct: 186 GKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGP 245 Query: 436 KNVPYLVTHDGRTIRYPDPLIKV 504 +PY+VTHD RTIR+P+P IK+ Sbjct: 246 NQIPYIVTHDSRTIRFPNPEIKI 268 Score = 65.3 bits (152), Expect = 2e-09 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 31/105 (29%) Frame = +2 Query: 41 ARGPKKHLKRLNAPKAWMLDKLGG-------------------------VYAPRPSTGP- 142 ARGPKKHLKR+NAPK+WML+KLGG +Y + +T P Sbjct: 83 ARGPKKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPS 142 Query: 143 ---HKLRECLPLVIFLRNRLKYALTGNEVL*IV--KQRLIKVVGK 262 HKLRE LPL + L+ RL YAL G +V I+ K++ + V GK Sbjct: 143 QGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGK 187 Score = 58.0 bits (134), Expect = 2e-07 Identities = 24/45 (53%), Positives = 33/45 (73%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 +G G I E+H GSFDI H+KD+ G+ FATRL N+F++G+G K Sbjct: 301 IGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKK 345 Score = 39.9 bits (89), Expect = 0.066 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +3 Query: 510 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 +++ D+ KI +F ESGN+C I G N+GRVG Sbjct: 271 TLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVG 305 >UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia theta|Rep: 40S ribosomal protein S4 - Guillardia theta (Cryptomonas phi) Length = 257 Score = 113 bits (271), Expect = 6e-24 Identities = 50/84 (59%), Positives = 65/84 (77%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCKV RV+ G Sbjct: 74 GKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGS 133 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 K +PY+VTHDGRTIR+P+ LIK N Sbjct: 134 KGIPYIVTHDGRTIRFPNLLIKSN 157 Score = 95.9 bits (228), Expect = 1e-18 Identities = 44/75 (58%), Positives = 57/75 (76%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 M+RG KKH KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E Sbjct: 1 MSRGIKKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRE 60 Query: 218 VL*IVKQRLIKVVGK 262 L I+K+ I V GK Sbjct: 61 SLNILKKNEIYVDGK 75 Score = 47.6 bits (108), Expect = 3e-04 Identities = 19/39 (48%), Positives = 28/39 (71%) Frame = +3 Query: 498 QSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 +S SI LD+ K++DFIKF G+LC++ G N+GR+G Sbjct: 155 KSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIG 193 Score = 40.3 bits (90), Expect = 0.050 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 +G G ++ GS IV +KD G +F+T+ N+F+IGKGTK Sbjct: 189 IGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTK 233 >UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4; Trichomonas vaginalis G3|Rep: 40S ribosomal protein S4-C, putative - Trichomonas vaginalis G3 Length = 269 Score = 108 bits (260), Expect = 1e-22 Identities = 46/84 (54%), Positives = 62/84 (73%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V + G Sbjct: 88 GKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGA 147 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 K +P++VTHDGRTI Y DP ++V+ Sbjct: 148 KGIPHVVTHDGRTISYVDPSVRVH 171 Score = 102 bits (245), Expect = 8e-21 Identities = 52/84 (61%), Positives = 60/84 (71%) Frame = +2 Query: 11 SFSI*YLSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNR 190 SFS L M R + HLKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+R Sbjct: 6 SFSWSVLFLMPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDR 65 Query: 191 LKYALTGNEVL*IVKQRLIKVVGK 262 LKYALT E + IVK+RL+KV GK Sbjct: 66 LKYALTAKEAVAIVKRRLVKVDGK 89 Score = 49.2 bits (112), Expect = 1e-04 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +2 Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 724 +G G I E+ SFDIVH+KD++G FATR+ NVF+IG+ Sbjct: 203 VGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGE 244 Score = 39.5 bits (88), Expect = 0.088 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = +3 Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617 P+ + +++ +I T ++ IKF+ G++ M+T G N+GRVGT Sbjct: 166 PSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGT 208 >UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal protein S4, X isoform; n=1; Macaca mulatta|Rep: PREDICTED: similar to 40S ribosomal protein S4, X isoform - Macaca mulatta Length = 244 Score = 106 bits (255), Expect = 5e-22 Identities = 47/84 (55%), Positives = 60/84 (71%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK++++ Sbjct: 84 GKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRA 143 Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507 K +P+LV HD T+R+PD LIKVN Sbjct: 144 KGIPHLVIHDIHTVRHPDSLIKVN 167 Score = 105 bits (253), Expect = 9e-22 Identities = 54/78 (69%), Positives = 62/78 (79%) Frame = +2 Query: 29 LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 208 ++ +A GPK+HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALT Sbjct: 9 ITAVAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLP-HIFLRNRLKYALT 67 Query: 209 GNEVL*IVKQRLIKVVGK 262 G+EV I Q IKV GK Sbjct: 68 GDEVKKICMQWFIKVDGK 85 Score = 45.2 bits (102), Expect = 0.002 Identities = 19/35 (54%), Positives = 28/35 (80%) Frame = +3 Query: 510 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 +IQ+D+ T KI +KF++GNLC++TGG N GR+G Sbjct: 169 TIQIDLETGKITA-LKFDTGNLCLVTGGGNWGRIG 202 Score = 42.7 bits (96), Expect = 0.009 Identities = 20/44 (45%), Positives = 28/44 (63%) Frame = +2 Query: 602 GARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733 G G I +RERHP SFD H+KD+ ++F+ +F+I KG K Sbjct: 199 GRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNK 238 >UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania major Length = 273 Score = 98.3 bits (234), Expect = 2e-19 Identities = 45/67 (67%), Positives = 52/67 (77%) Frame = +2 Query: 53 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IV 232 KKHLKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I+ Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62 Query: 233 KQRLIKV 253 +Q L+ V Sbjct: 63 RQGLVHV 69 Score = 93.5 bits (222), Expect = 5e-18 Identities = 44/76 (57%), Positives = 51/76 (67%) Frame = +1 Query: 265 RTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNV 444 R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL KV + T V Sbjct: 74 RRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRV 133 Query: 445 PYLVTHDGRTIRYPDP 492 P VTHDG IRYPDP Sbjct: 134 PVAVTHDGHRIRYPDP 149 Score = 54.0 bits (124), Expect = 4e-06 Identities = 23/41 (56%), Positives = 30/41 (73%) Frame = +2 Query: 602 GARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 724 G G IV E HPG+F+I H+KD++G FATR N+F+IGK Sbjct: 187 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGK 227 >UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 - Encephalitozoon cuniculi Length = 268 Score = 82.2 bits (194), Expect = 1e-14 Identities = 39/81 (48%), Positives = 56/81 (69%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L KV + Sbjct: 74 GRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTKKYEN- 132 Query: 436 KNVPYLVTHDGRTIRYPDPLI 498 + +PY+V+ G +IR+ DP I Sbjct: 133 QGIPYIVSSCGLSIRFCDPAI 153 Score = 75.4 bits (177), Expect = 1e-12 Identities = 35/75 (46%), Positives = 48/75 (64%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 M G + HLKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60 Query: 218 VL*IVKQRLIKVVGK 262 + I+ ++ IKV G+ Sbjct: 61 LSIILAEKNIKVNGR 75 >UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryarchaeota|Rep: 30S ribosomal protein S4e - Methanococcus maripaludis Length = 244 Score = 63.3 bits (147), Expect = 6e-09 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +2 Query: 44 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 223 +GP+KHLKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63 Query: 224 *IVKQRLIKVVG 259 I++ I + G Sbjct: 64 KIIQTGKILIDG 75 Score = 44.0 bits (99), Expect = 0.004 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV--KRVAT 429 G R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK+ K V Sbjct: 75 GLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVNKTVVK 132 Query: 430 GPKNVPYLVTHDGR 471 G N+ L HDGR Sbjct: 133 G-GNI-QLNLHDGR 144 >UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methanopyrus kandleri|Rep: 30S ribosomal protein S4e - Methanopyrus kandleri Length = 260 Score = 62.9 bits (146), Expect = 8e-09 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +2 Query: 47 GPKKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 223 GPK+H+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREAR 66 Query: 224 *IVKQRLIKVVG 259 I+ + I V G Sbjct: 67 KIITRGEIYVDG 78 Score = 54.0 bits (124), Expect = 4e-06 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C++K Sbjct: 78 GVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVR 137 Query: 436 KNVPYLVTHDGRT--IRYPDP 492 + HDG+ + DP Sbjct: 138 GGNLQITMHDGKNWLVEIEDP 158 >UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum aerophilum Length = 238 Score = 59.7 bits (138), Expect = 8e-08 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Frame = +2 Query: 59 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVK 235 HL+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+ Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62 Query: 236 QRLIKVVG 259 + +KV G Sbjct: 63 RGYVKVDG 70 Score = 48.0 bits (109), Expect = 3e-04 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V+ Sbjct: 70 GVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVK 129 Query: 436 KNVPYLVTHDGRTI 477 L HDGR + Sbjct: 130 GGRIQLHFHDGRNL 143 >UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobacteriaceae|Rep: Ribosomal protein S4e - Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) Length = 242 Score = 58.4 bits (135), Expect = 2e-07 Identities = 28/74 (37%), Positives = 44/74 (59%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLCK+ +T Sbjct: 75 GRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIK 132 Query: 436 KNVPYLVTHDGRTI 477 + HDG+ + Sbjct: 133 GGKIQVNLHDGKNV 146 Score = 46.8 bits (106), Expect = 6e-04 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +2 Query: 47 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL* 226 G +KHLK APK W + + +PS G H + L L + +R+ LK A E Sbjct: 5 GSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKR 64 Query: 227 IVKQRLIKVVGK 262 I+ + V G+ Sbjct: 65 IINSGNVLVDGR 76 >UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolobaceae|Rep: 30S ribosomal protein S4e - Sulfolobus acidocaldarius Length = 244 Score = 54.8 bits (126), Expect = 2e-06 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVR D YP G MDVV I + R+I D T I+ E+AKYK ++ T Sbjct: 69 GKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLK 128 Query: 436 KNVPYLVTHDGRTIRYP-DPLIKVNVPSS*TLQL 534 V L DGR I + L + N+P+ TL++ Sbjct: 129 SGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKI 162 Score = 37.5 bits (83), Expect = 0.35 Identities = 23/68 (33%), Positives = 32/68 (47%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238 H+ R AP + K + R GPHK++E +PL I L+ LK T E I+ Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62 Query: 239 RLIKVVGK 262 + V GK Sbjct: 63 GKVLVDGK 70 >UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermoplasma|Rep: 30S ribosomal protein S4e - Thermoplasma acidophilum Length = 235 Score = 54.4 bits (125), Expect = 3e-06 Identities = 31/83 (37%), Positives = 42/83 (50%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GK + + GFMDV+ I E +R++Y+ +G + + T E A KL KV+ P Sbjct: 70 GKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAP 127 Query: 436 KNVPYLVTHDGRTIRYPDPLIKV 504 N L THDGRT D KV Sbjct: 128 GNRIQLGTHDGRTFITDDKSKKV 150 >UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga maquilingensis IC-167|Rep: Ribosomal protein S4E - Caldivirga maquilingensis IC-167 Length = 237 Score = 53.6 bits (123), Expect = 5e-06 Identities = 24/68 (35%), Positives = 39/68 (57%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238 HL+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ + Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62 Query: 239 RLIKVVGK 262 +KV GK Sbjct: 63 GYVKVDGK 70 Score = 51.6 bits (118), Expect = 2e-05 Identities = 28/74 (37%), Positives = 36/74 (48%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVR D YP G MDV+ + NE +R+I D RI EA K+C+++ Sbjct: 69 GKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDKTMVK 128 Query: 436 KNVPYLVTHDGRTI 477 L HDGR I Sbjct: 129 AGKIQLNLHDGRNI 142 >UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E, central - Thermofilum pendens (strain Hrk 5) Length = 251 Score = 53.6 bits (123), Expect = 5e-06 Identities = 27/78 (34%), Positives = 42/78 (53%) Frame = +2 Query: 29 LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 208 + +G +HL+R AP W + + V+ +PS GPH L +P+ I LR+ YA T Sbjct: 1 MGRKVKGSLRHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKT 60 Query: 209 GNEVL*IVKQRLIKVVGK 262 E I+ R+I+V G+ Sbjct: 61 MKEARRILASRVIEVDGR 78 Score = 52.8 bits (121), Expect = 9e-06 Identities = 26/74 (35%), Positives = 38/74 (51%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G+V TD +P G MDV+ I + +R++ D + I PEEA YKL +++R T Sbjct: 77 GRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVK 136 Query: 436 KNVPYLVTHDGRTI 477 HDGR + Sbjct: 137 NGDLQFTLHDGRNV 150 >UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfurococcales|Rep: 30S ribosomal protein S4e - Aeropyrum pernix Length = 253 Score = 52.4 bits (120), Expect = 1e-05 Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVKRVATG 432 G VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K +++ T Sbjct: 75 GVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIENKTTV 133 Query: 433 PKNVPYLVTHDGRTI--RYPDP 492 L HDGR I R DP Sbjct: 134 KGGHVQLNLHDGRNILVRVKDP 155 Score = 50.0 bits (114), Expect = 6e-05 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +2 Query: 38 MAR-GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGN 214 MAR G ++ LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAR 60 Query: 215 EVL*IVKQRLIKVVG 259 E ++ + +V G Sbjct: 61 EARKLISEGHFRVDG 75 Score = 37.5 bits (83), Expect = 0.35 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = +3 Query: 468 PHHPLSRPTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614 P +P+ Y++ ++ + + +I IKF G + +I GGRN+GRVG Sbjct: 155 PRNPVE-DVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVG 202 >UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139; n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical protein Faci_03001139 - Ferroplasma acidarmanus fer1 Length = 241 Score = 51.2 bits (117), Expect = 3e-05 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATG 432 G++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K VK+ G Sbjct: 71 GRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIG 130 Query: 433 PKNVPYLVTHDGRTI 477 + L HDG+TI Sbjct: 131 TGKI-QLGFHDGKTI 144 >UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e - Nanoarchaeum equitans Length = 234 Score = 48.8 bits (111), Expect = 1e-04 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATG 432 G+ D +P G DV++I + NE +R++ D +G+ + +I EEA K K +++V+ Sbjct: 75 GRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVR 134 Query: 433 PKNVPYLVTHDGRT 474 + Y +T DGRT Sbjct: 135 GGKIQYTLT-DGRT 147 Score = 42.7 bits (96), Expect = 0.009 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = +2 Query: 53 KKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*I 229 K+HL+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV + Sbjct: 6 KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYL 65 Query: 230 VKQRLIKVVGK 262 + + V G+ Sbjct: 66 LNNGKVLVDGR 76 >UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarchaeota|Rep: 30S ribosomal protein S4E - Uncultured methanogenic archaeon RC-I Length = 234 Score = 46.8 bits (106), Expect = 6e-04 Identities = 23/68 (33%), Positives = 37/68 (54%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238 HLKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ I+ + Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64 Query: 239 RLIKVVGK 262 + V GK Sbjct: 65 GKVLVDGK 72 Score = 44.4 bits (100), Expect = 0.003 Identities = 24/74 (32%), Positives = 35/74 (47%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GKVR D Y G D +SI N +R++ + G+F H + +A K+CK+ Sbjct: 71 GKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIVNKTALR 128 Query: 436 KNVPYLVTHDGRTI 477 L HDG T+ Sbjct: 129 GGKIQLNLHDGTTM 142 >UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowiella natans|Rep: 40S ribosomal protein S4 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 242 Score = 45.6 bits (103), Expect = 0.001 Identities = 22/83 (26%), Positives = 38/83 (45%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 GK +P MD +S N+ +R++ G+ T++ I E K+CKV ++ Sbjct: 74 GKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINAS 133 Query: 436 KNVPYLVTHDGRTIRYPDPLIKV 504 ++T D R ++ IKV Sbjct: 134 SKNKIIITDDLRELKINYAKIKV 156 Score = 37.5 bits (83), Expect = 0.35 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = +2 Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217 MA+G KKH KR+++ K G++ + S+GPH + + L+ ++ A E Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQE 60 Query: 218 VL*IVKQRLIKVVGK 262 +VK + V GK Sbjct: 61 AQKVVKTGFLYVNGK 75 >UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental samples|Rep: Ribosomal protein S4 - uncultured marine group II euryarchaeote DeepAnt-JyKC7 Length = 232 Score = 45.2 bits (102), Expect = 0.002 Identities = 26/78 (33%), Positives = 39/78 (50%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V +T Sbjct: 71 GRIETDLGRGVGLMDVLTVGEDS--FRCILDVNGKLRYRSISDKAAASKLCRVMGKSTIT 128 Query: 436 KNVPYLVTHDGRTIRYPD 489 + HDGR I D Sbjct: 129 DGKTQIHLHDGRNILVSD 146 Score = 44.8 bits (101), Expect = 0.002 Identities = 21/68 (30%), Positives = 36/68 (52%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238 H+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E ++ Sbjct: 5 HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLAT 64 Query: 239 RLIKVVGK 262 R + V G+ Sbjct: 65 RQVLVDGR 72 >UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarchaeota|Rep: 30S ribosomal protein S4e - Methanosarcina mazei (Methanosarcina frisia) Length = 235 Score = 45.2 bits (102), Expect = 0.002 Identities = 23/74 (31%), Positives = 37/74 (50%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435 G R D +P G DV+++ NE +R++ D KGR ++++ E KLC++ T Sbjct: 69 GISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNKTTVK 127 Query: 436 KNVPYLVTHDGRTI 477 L +DG I Sbjct: 128 GGKIQLNLNDGTNI 141 Score = 40.7 bits (91), Expect = 0.038 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238 H KRL+ PK+W + + G + GPH LPL + +R+ LK E I+ + Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62 Query: 239 RLIKVVG 259 + V G Sbjct: 63 GKVLVDG 69 Score = 36.7 bits (81), Expect = 0.62 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 495 YQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTSCPARDI 638 Y ++ S+ L I ++ +KFE GNL M+ GG++ G G R++ Sbjct: 147 YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREV 194 >UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal protein S4E, central - Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) Length = 239 Score = 44.4 bits (100), Expect = 0.003 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +2 Query: 65 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQRL 244 KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV I+ R Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63 Query: 245 IKVVG 259 + + G Sbjct: 64 VLLNG 68 Score = 34.7 bits (76), Expect = 2.5 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 429 G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV T Sbjct: 68 GHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANKTT 125 >UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Methanomicrobiales|Rep: Ribosomal protein S4E, central - Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) Length = 242 Score = 42.7 bits (96), Expect = 0.009 Identities = 21/58 (36%), Positives = 29/58 (50%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 429 G+ D G D+VSI K + +R+ DVKG I E AK +LCK++ T Sbjct: 69 GRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTT 126 Score = 41.9 bits (94), Expect = 0.016 Identities = 24/69 (34%), Positives = 38/69 (55%) Frame = +2 Query: 56 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVK 235 K+LKRL AP +W + K + + + GPH LP+ ++LR + A +EV I+ Sbjct: 3 KYLKRLVAPGSWHIPKKVQKFVMKTAPGPHN-AGALPVGVWLREHIGLAQNASEVKKILH 61 Query: 236 QRLIKVVGK 262 QR + V G+ Sbjct: 62 QRDVLVNGR 70 Score = 33.1 bits (72), Expect = 7.6 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 5/50 (10%) Frame = +3 Query: 480 LSRPTYQSQRSIQLDIATT-----KIMDFIKFESGNLCMITGGRNLGRVG 614 L+ TY+++ S+ + + T +I+D + GN+ MI GG++ G+VG Sbjct: 143 LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVG 192 >UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococcoides burtonii DSM 6242|Rep: Ribosomal protein S4E - Methanococcoides burtonii (strain DSM 6242) Length = 236 Score = 40.7 bits (91), Expect = 0.038 Identities = 18/41 (43%), Positives = 26/41 (63%) Frame = +3 Query: 495 YQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617 Y ++ SI L + K++ IK+E GNL MI GG + G VG+ Sbjct: 148 YNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGS 188 Score = 39.9 bits (89), Expect = 0.066 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRL 193 H KR++ PK+W + K + GPH + +PL + LR+ L Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDML 48 Score = 38.3 bits (85), Expect = 0.20 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 417 G R D +P G MD+++I N +R++ D K R ++++ A KLC+++ Sbjct: 70 GVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIE 122 >UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobacteriaceae|Rep: 30S ribosomal protein S4E - Haloarcula marismortui (Halobacterium marismortui) Length = 234 Score = 37.9 bits (84), Expect = 0.27 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +2 Query: 59 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238 H KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + + Sbjct: 4 HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62 Query: 239 RLIKVVGK 262 + + GK Sbjct: 63 DNVLINGK 70 >UniRef50_Q890E3 Cluster: Acetyltransferase (GNAT) family; n=1; Lactobacillus plantarum|Rep: Acetyltransferase (GNAT) family - Lactobacillus plantarum Length = 163 Score = 37.1 bits (82), Expect = 0.47 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +2 Query: 416 SVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTFHPVRHCNYEDYG-LHQV*VRELVYDHG 589 + WRP+ R W M+ A +A + TF P RH NYE +G L+ + V + HG Sbjct: 46 ATWRPE----RRWQNMLLAMTADGEVVGVCTFGPARHANYEGWGELYSLYVHPNYHHHG 100 >UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1; Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA sequence - Ostreococcus tauri Length = 197 Score = 35.9 bits (79), Expect = 1.1 Identities = 20/47 (42%), Positives = 26/47 (55%) Frame = -3 Query: 751 GSEMYALRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDVP 611 G + L A D EHV + R + ++ GVL VHN EG + LA D P Sbjct: 42 GKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHP 88 Score = 33.5 bits (73), Expect = 5.8 Identities = 20/67 (29%), Positives = 35/67 (52%) Frame = -1 Query: 498 DKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*SKQFIS 319 D + + +GAA+++ R+ L QLVL D V ES+L ++D + FI+ Sbjct: 127 DHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIA 186 Query: 318 LLN*DNI 298 L + D++ Sbjct: 187 LFDGDDV 193 >UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1; Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus gallus Length = 1119 Score = 35.1 bits (77), Expect = 1.9 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = -2 Query: 728 CPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRCAHAP 603 C CR R RRC PWSP CAQ C + RDV RC P Sbjct: 144 CRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDVQGAARCECRP 189 >UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium tuberculosis complex|Rep: PROBABLE OXIDASE - Mycobacterium bovis Length = 504 Score = 35.1 bits (77), Expect = 1.9 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = -2 Query: 170 PGASTRATCGDRLTVSVHTHRQVCPTSMLWERLSASNAS*GLAPCWTSI 24 PG RAT GD + VSV T+R PTS+ W ++ N G P +I Sbjct: 93 PGPLIRATVGDEIVVSV-TNRLGDPTSVHWHGIALRNDMDGTEPATANI 140 >UniRef50_A7EFC4 Cluster: Putative uncharacterized protein; n=1; Sclerotinia sclerotiorum 1980|Rep: Putative uncharacterized protein - Sclerotinia sclerotiorum 1980 Length = 695 Score = 35.1 bits (77), Expect = 1.9 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 7/87 (8%) Frame = -1 Query: 312 N*DNIHKSSRISRVSPNFPTTFMRRCFTI*RTSFPVKAYFRRFLRK----ITRGKHSRNL 145 N D+I SS VSP++PT+F+ + RT F LR + + S Sbjct: 252 NSDSIQSSSIPELVSPSYPTSFVHLVQPVLRTDLGAYDDFISLLRMSKNIVVGSRASSGS 311 Query: 144 WGPVD---GLGAYTPPSLSNIHALGAF 73 +G + GLGAYT S S+I LG + Sbjct: 312 YGAIGLGLGLGAYT-GSTSSISTLGTY 337 >UniRef50_A6SQK8 Cluster: Putative uncharacterized protein; n=1; Botryotinia fuckeliana B05.10|Rep: Putative uncharacterized protein - Botryotinia fuckeliana B05.10 Length = 540 Score = 33.5 bits (73), Expect = 5.8 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Frame = -1 Query: 375 TVDCESALNIID*SKQFISLLN*DNIHKSSRISRVSPNFPTTFMRRCFTI*RTSFPVKAY 196 T ALN D ++ ++ N D+I SS VSP++PT+F+ + RT Sbjct: 137 TAPSTPALNQTDRKEE--NMHNSDSIQSSSIPEPVSPSYPTSFLHLIQPVLRTDLGAYDD 194 Query: 195 F---RRFLRKITRGKHSRNLWGPVD---GLGAYTPPS 103 F R R + + S +G + GLGAYT S Sbjct: 195 FISLLRMSRNVVGSRVSSGSYGGIGLGLGLGAYTGSS 231 >UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picrophilus torridus|Rep: 30S ribosomal protein S4e - Picrophilus torridus Length = 234 Score = 33.5 bits (73), Expect = 5.8 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +3 Query: 510 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617 S+ + I +I+D +KF GN ITGG ++G + T Sbjct: 153 SVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIAT 188 >UniRef50_Q3W9H9 Cluster: Short-chain dehydrogenase/reductase SDR; n=3; Actinomycetales|Rep: Short-chain dehydrogenase/reductase SDR - Frankia sp. EAN1pec Length = 390 Score = 33.1 bits (72), Expect = 7.6 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = +1 Query: 610 WAHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGRTSRCR 753 + HRV R R H Q G H H+ R+ R G G SR R Sbjct: 18 YQHRVSRRADRRPGHWLLQRHQGGHPAHDTSARLRTRPGRPGERSRTR 65 >UniRef50_A6E8K7 Cluster: Putative uncharacterized protein; n=1; Pedobacter sp. BAL39|Rep: Putative uncharacterized protein - Pedobacter sp. BAL39 Length = 195 Score = 33.1 bits (72), Expect = 7.6 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -1 Query: 213 FPVKAYFRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKRFK---CFLGPR 43 F KA FR+ +RK+ G+H+ +D A+T PSL H KR++ F+G R Sbjct: 15 FFFKARFRKLIRKL--GRHTEVYLVDIDNTLAHTWPSLQQRHYSAENKRYRSLPIFIGMR 72 Query: 42 AML 34 + L Sbjct: 73 SYL 75 >UniRef50_Q18ED9 Cluster: Cell surface calcium-binding acidic-repeat protein; n=1; Haloquadratum walsbyi DSM 16790|Rep: Cell surface calcium-binding acidic-repeat protein - Haloquadratum walsbyi (strain DSM 16790) Length = 830 Score = 33.1 bits (72), Expect = 7.6 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 594 RNLGRVGTSCPARDIPAPS-TLCTSRTPRDTPSP 692 R+ G +G CPAR P P+ T + TP TP+P Sbjct: 498 RDSGSLGKGCPARTTPTPTPTPTDTPTPTSTPTP 531 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 844,864,590 Number of Sequences: 1657284 Number of extensions: 18730705 Number of successful extensions: 54468 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 51619 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 54445 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 62558016040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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