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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1114
         (756 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E...   151   2e-35
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=...   151   2e-35
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo...   150   4e-35
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar...   137   3e-31
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein...   130   2e-30
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso...   118   1e-25
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ...   114   2e-24
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard...   113   6e-24
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n...   108   1e-22
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso...   106   5e-22
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot...    98   2e-19
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal...    82   1e-14
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar...    63   6e-09
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano...    63   8e-09
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac...    60   8e-08
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact...    58   2e-07
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo...    55   2e-06
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop...    54   3e-06
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ...    54   5e-06
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th...    54   5e-06
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu...    52   1e-05
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011...    51   3e-05
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc...    49   1e-04
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc...    47   6e-04
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi...    46   0.001
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta...    45   0.002
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc...    45   0.002
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me...    44   0.003
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me...    43   0.009
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc...    41   0.038
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac...    38   0.27 
UniRef50_Q890E3 Cluster: Acetyltransferase (GNAT) family; n=1; L...    37   0.47 
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n...    36   1.1  
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1...    35   1.9  
UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium tu...    35   1.9  
UniRef50_A7EFC4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_A6SQK8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph...    33   5.8  
UniRef50_Q3W9H9 Cluster: Short-chain dehydrogenase/reductase SDR...    33   7.6  
UniRef50_A6E8K7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_Q18ED9 Cluster: Cell surface calcium-binding acidic-rep...    33   7.6  

>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
           Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
           protein S4 - Entamoeba histolytica HM-1:IMSS
          Length = 326

 Score =  151 bits (365), Expect = 2e-35
 Identities = 98/243 (40%), Positives = 128/243 (52%), Gaps = 11/243 (4%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           MARGP+ HLKRLNAP  WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G E
Sbjct: 1   MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60

Query: 218 VL*IVKQRLIKVVGKXXXXXXXXXXXXXXXXXRRLMNCFD*SMMLRADSQSTVSPLRRLS 397
           V  IVK R IK+ GK                  R    F   +M     +  + P   L+
Sbjct: 61  VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENF--RLMYNTKRRFCLVP---LT 115

Query: 398 TSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTFHPVRHCNYED---YGLHQV*VR 568
               K  + + + R+  T      A   I TH  ++  +P       D     L    + 
Sbjct: 116 AEQAKFKLCKIEKRVLGT-----GAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIV 170

Query: 569 ELV-YDHGRP*LGARGHIVSR-------ERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 724
           + V +D G   +   G+ + R       E HPGSF+IVHIKD+ G+TF TRLNNVF+IGK
Sbjct: 171 DFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGK 230

Query: 725 GTK 733
           GT+
Sbjct: 231 GTE 233



 Score =  110 bits (264), Expect = 4e-23
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GK+RTD  YP GFMDV+SI +T E FRL+Y+ K RF +  +T E+AK+KLCK+++   G 
Sbjct: 74  GKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGT 133

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
             +PY+VTHDGRTIRYP P ++ N
Sbjct: 134 GAIPYIVTHDGRTIRYPHPELQAN 157



 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           P  Q+  +I+L++ T KI+DF+KF+ GN  M+ GG  +GRVG
Sbjct: 152 PELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVG 193


>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
           n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
           isoform - Homo sapiens (Human)
          Length = 263

 Score =  151 bits (365), Expect = 2e-35
 Identities = 66/84 (78%), Positives = 74/84 (88%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++  G 
Sbjct: 74  GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
           K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157



 Score =  132 bits (318), Expect = 1e-29
 Identities = 61/75 (81%), Positives = 66/75 (88%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 218 VL*IVKQRLIKVVGK 262
           V  I  QR IK+ GK
Sbjct: 61  VKKICMQRFIKIDGK 75



 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           LG  G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233



 Score = 60.9 bits (141), Expect = 3e-08
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           P  +   +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193


>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
           Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
           melanogaster (Fruit fly)
          Length = 261

 Score =  150 bits (363), Expect = 4e-35
 Identities = 65/84 (77%), Positives = 73/84 (86%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G 
Sbjct: 74  GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
           K VP+LVTHDGRTIRYPDPLI  N
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHAN 157



 Score =  134 bits (325), Expect = 2e-30
 Identities = 64/75 (85%), Positives = 67/75 (89%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 218 VL*IVKQRLIKVVGK 262
           V  IV QRL+KV GK
Sbjct: 61  VTKIVMQRLVKVDGK 75



 Score = 79.8 bits (188), Expect = 7e-14
 Identities = 36/45 (80%), Positives = 38/45 (84%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           LG  G +V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233



 Score = 68.5 bits (160), Expect = 2e-10
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
           P   +  S+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194


>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
           Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 262

 Score =  137 bits (331), Expect = 3e-31
 Identities = 62/84 (73%), Positives = 69/84 (82%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I  EEAK+KLCKV+ +  G 
Sbjct: 74  GKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQ 133

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
           K +PYL T+DGRTIRYPDPLIK N
Sbjct: 134 KGIPYLNTYDGRTIRYPDPLIKPN 157



 Score =  121 bits (291), Expect = 2e-26
 Identities = 56/75 (74%), Positives = 64/75 (85%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT  E
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 218 VL*IVKQRLIKVVGK 262
           V+ I+ QR I+V GK
Sbjct: 61  VISILMQRHIQVDGK 75



 Score = 66.5 bits (155), Expect = 7e-10
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +2

Query: 602 GARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           G  G I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK
Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTK 233



 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           P  +   +I+LD+   KI++FIKF+ GN+ M+TGGRN GRVG
Sbjct: 152 PLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVG 193


>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
           S4, X isoform (LOC126235), mRNA; n=1; Takifugu
           rubripes|Rep: similar to 40S ribosomal protein S4, X
           isoform (LOC126235), mRNA - Takifugu rubripes
          Length = 291

 Score =  130 bits (313), Expect = 5e-29
 Identities = 60/74 (81%), Positives = 65/74 (87%)
 Frame = +2

Query: 41  ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 220
           ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2   ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61

Query: 221 L*IVKQRLIKVVGK 262
             I  QR IK+ GK
Sbjct: 62  KKICMQRFIKIDGK 75



 Score = 86.6 bits (205), Expect(2) = 2e-30
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 396
           GKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 74  GKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120



 Score = 77.0 bits (181), Expect = 5e-13
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           LG  G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K
Sbjct: 221 LGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 265



 Score = 68.9 bits (161), Expect(2) = 2e-30
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +1

Query: 394 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 507
           +YKLCKVK++  G K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVN 189



 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 32/42 (76%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           P  +   ++++D+ T KI DFIKF++ N+CM+TGG NLGR+G
Sbjct: 184 PLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTGGANLGRIG 225


>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
           protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
           similar to 40S ribosomal protein S4, X isoform - Canis
           familiaris
          Length = 240

 Score =  118 bits (285), Expect = 1e-25
 Identities = 55/75 (73%), Positives = 61/75 (81%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           MA  P+KHLK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1   MAHSPRKHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 218 VL*IVKQRLIKVVGK 262
           V  I  Q  IK+ GK
Sbjct: 61  VKKIRMQHFIKMDGK 75



 Score = 93.1 bits (221), Expect = 7e-18
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = +1

Query: 346 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 507
           D KGRF +HRITPEEAKYKL KV+++  G K +P+LVTHD RTIRYPDPLIK+N
Sbjct: 76  DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMN 129



 Score = 69.7 bits (163), Expect = 7e-11
 Identities = 28/43 (65%), Positives = 37/43 (86%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 727
           LG  G I +RE HPGSFD+VH+KD+ G++FATRL+N+F+IGKG
Sbjct: 161 LGRIGVITNRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKG 203



 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           P  +   +IQ+D+ T KI DF KF++GNLCM+TGG NLGR+G
Sbjct: 124 PLIKMNDTIQIDLETGKITDFFKFDTGNLCMVTGGTNLGRIG 165


>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Ribosomal family S4e containing protein - Tetrahymena
           thermophila SB210
          Length = 370

 Score =  114 bits (275), Expect = 2e-24
 Identities = 50/83 (60%), Positives = 62/83 (74%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVR D  YP G MDVV IEKT++ FR++YD KGRF +  ++ EEAKYKL KV   A GP
Sbjct: 186 GKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGP 245

Query: 436 KNVPYLVTHDGRTIRYPDPLIKV 504
             +PY+VTHD RTIR+P+P IK+
Sbjct: 246 NQIPYIVTHDSRTIRFPNPEIKI 268



 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 31/105 (29%)
 Frame = +2

Query: 41  ARGPKKHLKRLNAPKAWMLDKLGG-------------------------VYAPRPSTGP- 142
           ARGPKKHLKR+NAPK+WML+KLGG                         +Y  + +T P 
Sbjct: 83  ARGPKKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPS 142

Query: 143 ---HKLRECLPLVIFLRNRLKYALTGNEVL*IV--KQRLIKVVGK 262
              HKLRE LPL + L+ RL YAL G +V  I+  K++ + V GK
Sbjct: 143 QGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGK 187



 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           +G  G I   E+H GSFDI H+KD+ G+ FATRL N+F++G+G K
Sbjct: 301 IGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKK 345



 Score = 39.9 bits (89), Expect = 0.066
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +3

Query: 510 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           +++ D+   KI +F   ESGN+C I  G N+GRVG
Sbjct: 271 TLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVG 305


>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
           theta|Rep: 40S ribosomal protein S4 - Guillardia theta
           (Cryptomonas phi)
          Length = 257

 Score =  113 bits (271), Expect = 6e-24
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVR D  +PAG MDV+SI+ T E +R++YD  G F +HRIT +E+ +KLCKV RV+ G 
Sbjct: 74  GKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGS 133

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
           K +PY+VTHDGRTIR+P+ LIK N
Sbjct: 134 KGIPYIVTHDGRTIRFPNLLIKSN 157



 Score = 95.9 bits (228), Expect = 1e-18
 Identities = 44/75 (58%), Positives = 57/75 (76%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           M+RG KKH KRLNAPK W+L+KLGG++APR S+GPHK +  +PLVI +RN+LKY+    E
Sbjct: 1   MSRGIKKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRE 60

Query: 218 VL*IVKQRLIKVVGK 262
            L I+K+  I V GK
Sbjct: 61  SLNILKKNEIYVDGK 75



 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +3

Query: 498 QSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           +S  SI LD+   K++DFIKF  G+LC++  G N+GR+G
Sbjct: 155 KSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIG 193



 Score = 40.3 bits (90), Expect = 0.050
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           +G  G  ++     GS  IV +KD  G +F+T+  N+F+IGKGTK
Sbjct: 189 IGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTK 233


>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
           Trichomonas vaginalis G3|Rep: 40S ribosomal protein
           S4-C, putative - Trichomonas vaginalis G3
          Length = 269

 Score =  108 bits (260), Expect = 1e-22
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVRT+  YP G MDV+ + K+NELFR+IYD KGRF +H I  +EA +KL +V +   G 
Sbjct: 88  GKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGA 147

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
           K +P++VTHDGRTI Y DP ++V+
Sbjct: 148 KGIPHVVTHDGRTISYVDPSVRVH 171



 Score =  102 bits (245), Expect = 8e-21
 Identities = 52/84 (61%), Positives = 60/84 (71%)
 Frame = +2

Query: 11  SFSI*YLSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNR 190
           SFS   L  M R  + HLKRL AP  W+L K  G +A  PSTGPHKLRECLP+ IFLR+R
Sbjct: 6   SFSWSVLFLMPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDR 65

Query: 191 LKYALTGNEVL*IVKQRLIKVVGK 262
           LKYALT  E + IVK+RL+KV GK
Sbjct: 66  LKYALTAKEAVAIVKRRLVKVDGK 89



 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +2

Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 724
           +G  G I   E+   SFDIVH+KD++G  FATR+ NVF+IG+
Sbjct: 203 VGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGE 244



 Score = 39.5 bits (88), Expect = 0.088
 Identities = 16/43 (37%), Positives = 29/43 (67%)
 Frame = +3

Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
           P+ +   +++ +I T ++   IKF+ G++ M+T G N+GRVGT
Sbjct: 166 PSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGT 208


>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
           protein S4, X isoform; n=1; Macaca mulatta|Rep:
           PREDICTED: similar to 40S ribosomal protein S4, X
           isoform - Macaca mulatta
          Length = 244

 Score =  106 bits (255), Expect = 5e-22
 Identities = 47/84 (55%), Positives = 60/84 (71%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GK+RTD   P   MDV+SI+K  E F LIY +  RF +HRITPEE KYKLCK++++    
Sbjct: 84  GKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRA 143

Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
           K +P+LV HD  T+R+PD LIKVN
Sbjct: 144 KGIPHLVIHDIHTVRHPDSLIKVN 167



 Score =  105 bits (253), Expect = 9e-22
 Identities = 54/78 (69%), Positives = 62/78 (79%)
 Frame = +2

Query: 29  LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 208
           ++ +A GPK+HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP  IFLRNRLKYALT
Sbjct: 9   ITAVAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLP-HIFLRNRLKYALT 67

Query: 209 GNEVL*IVKQRLIKVVGK 262
           G+EV  I  Q  IKV GK
Sbjct: 68  GDEVKKICMQWFIKVDGK 85



 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/35 (54%), Positives = 28/35 (80%)
 Frame = +3

Query: 510 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           +IQ+D+ T KI   +KF++GNLC++TGG N GR+G
Sbjct: 169 TIQIDLETGKITA-LKFDTGNLCLVTGGGNWGRIG 202



 Score = 42.7 bits (96), Expect = 0.009
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +2

Query: 602 GARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
           G  G I +RERHP SFD  H+KD+  ++F+     +F+I KG K
Sbjct: 199 GRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNK 238


>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
           Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
           major
          Length = 273

 Score = 98.3 bits (234), Expect = 2e-19
 Identities = 45/67 (67%), Positives = 52/67 (77%)
 Frame = +2

Query: 53  KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IV 232
           KKHLKRL APK WML KL GV+APRP  GPHKLRECLPL++ +RNRLKYAL   E   I+
Sbjct: 3   KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62

Query: 233 KQRLIKV 253
           +Q L+ V
Sbjct: 63  RQGLVHV 69



 Score = 93.5 bits (222), Expect = 5e-18
 Identities = 44/76 (57%), Positives = 51/76 (67%)
 Frame = +1

Query: 265 RTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNV 444
           R D  YPAGFMDVV I KT + FRL+YDVKGRF +  ++  EA+ KL KV  + T    V
Sbjct: 74  RRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRV 133

Query: 445 PYLVTHDGRTIRYPDP 492
           P  VTHDG  IRYPDP
Sbjct: 134 PVAVTHDGHRIRYPDP 149



 Score = 54.0 bits (124), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +2

Query: 602 GARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 724
           G  G IV  E HPG+F+I H+KD++G  FATR  N+F+IGK
Sbjct: 187 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGK 227


>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
           Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
           Encephalitozoon cuniculi
          Length = 268

 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 39/81 (48%), Positives = 56/81 (69%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G+VRT+  +P G  DVVSIEKT E FR++Y+V  +F +HRI+ EEA Y+L KV +     
Sbjct: 74  GRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTKKYEN- 132

Query: 436 KNVPYLVTHDGRTIRYPDPLI 498
           + +PY+V+  G +IR+ DP I
Sbjct: 133 QGIPYIVSSCGLSIRFCDPAI 153



 Score = 75.4 bits (177), Expect = 1e-12
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           M  G + HLKR  APK+WMLDK GG +A  P++GPHK  EC+PL   +   L+YA    E
Sbjct: 1   MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60

Query: 218 VL*IVKQRLIKVVGK 262
           +  I+ ++ IKV G+
Sbjct: 61  LSIILAEKNIKVNGR 75


>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
           Euryarchaeota|Rep: 30S ribosomal protein S4e -
           Methanococcus maripaludis
          Length = 244

 Score = 63.3 bits (147), Expect = 6e-09
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = +2

Query: 44  RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 223
           +GP+KHLKRL AP  W L +    +  RPS GPH + + LPL++ +R+ LKYA    E  
Sbjct: 4   KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63

Query: 224 *IVKQRLIKVVG 259
            I++   I + G
Sbjct: 64  KIIQTGKILIDG 75



 Score = 44.0 bits (99), Expect = 0.004
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV--KRVAT 429
           G  R +  +PAG MDV+SI + +E + +++D  GR ++ +   ++   KLCK+  K V  
Sbjct: 75  GLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVNKTVVK 132

Query: 430 GPKNVPYLVTHDGR 471
           G  N+  L  HDGR
Sbjct: 133 G-GNI-QLNLHDGR 144


>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
           Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
           Methanopyrus kandleri
          Length = 260

 Score = 62.9 bits (146), Expect = 8e-09
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +2

Query: 47  GPKKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 223
           GPK+H+KRL AP AW +  K GG +APRP  GPH +   +PL+I +R+ L YA    E  
Sbjct: 7   GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREAR 66

Query: 224 *IVKQRLIKVVG 259
            I+ +  I V G
Sbjct: 67  KIITRGEIYVDG 78



 Score = 54.0 bits (124), Expect = 4e-06
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G VR +P +P G MDVV I +T + +R++ +   R  +  I+ EEA+ K+C++K      
Sbjct: 78  GVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVR 137

Query: 436 KNVPYLVTHDGRT--IRYPDP 492
                +  HDG+   +   DP
Sbjct: 138 GGNLQITMHDGKNWLVEIEDP 158


>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
           Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
           aerophilum
          Length = 238

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVK 235
           HL+R  AP  W +  K GGV+  RPS GPH L   LPL + +R+ LKYA T +E   I+ 
Sbjct: 3   HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62

Query: 236 QRLIKVVG 259
           +  +KV G
Sbjct: 63  RGYVKVDG 70



 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 26/74 (35%), Positives = 38/74 (51%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G VR D  +P G MDV+ I  T E++R++ D    + +  I+ EEA  KL +V+      
Sbjct: 70  GVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVK 129

Query: 436 KNVPYLVTHDGRTI 477
                L  HDGR +
Sbjct: 130 GGRIQLHFHDGRNL 143


>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
           Methanobacteriaceae|Rep: Ribosomal protein S4e -
           Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
           861)
          Length = 242

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 28/74 (37%), Positives = 44/74 (59%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G+V  D  +P GFMD++ I KT E++R++ D KGR  +++I  EE   KLCK+   +T  
Sbjct: 75  GRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIK 132

Query: 436 KNVPYLVTHDGRTI 477
                +  HDG+ +
Sbjct: 133 GGKIQVNLHDGKNV 146



 Score = 46.8 bits (106), Expect = 6e-04
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +2

Query: 47  GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL* 226
           G +KHLK   APK W +      +  +PS G H +   L L + +R+ LK A    E   
Sbjct: 5   GSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKR 64

Query: 227 IVKQRLIKVVGK 262
           I+    + V G+
Sbjct: 65  IINSGNVLVDGR 76


>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
           Sulfolobaceae|Rep: 30S ribosomal protein S4e -
           Sulfolobus acidocaldarius
          Length = 244

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVR D  YP G MDVV I   +   R+I D     T   I+ E+AKYK  ++    T  
Sbjct: 69  GKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLK 128

Query: 436 KNVPYLVTHDGRTIRYP-DPLIKVNVPSS*TLQL 534
             V  L   DGR I    + L + N+P+  TL++
Sbjct: 129 SGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKI 162



 Score = 37.5 bits (83), Expect = 0.35
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238
           H+ R  AP    + K    +  R   GPHK++E +PL I L+  LK   T  E   I+  
Sbjct: 3   HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62

Query: 239 RLIKVVGK 262
             + V GK
Sbjct: 63  GKVLVDGK 70


>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
           Thermoplasma|Rep: 30S ribosomal protein S4e -
           Thermoplasma acidophilum
          Length = 235

 Score = 54.4 bits (125), Expect = 3e-06
 Identities = 31/83 (37%), Positives = 42/83 (50%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GK   +  +  GFMDV+ I    E +R++Y+ +G   + + T E A  KL KV+     P
Sbjct: 70  GKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAP 127

Query: 436 KNVPYLVTHDGRTIRYPDPLIKV 504
            N   L THDGRT    D   KV
Sbjct: 128 GNRIQLGTHDGRTFITDDKSKKV 150


>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
           maquilingensis IC-167|Rep: Ribosomal protein S4E -
           Caldivirga maquilingensis IC-167
          Length = 237

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238
           HL+R  +P+ W +++ G  ++ +PS GPH     +PL + LR+   YA T  E   I+ +
Sbjct: 3   HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62

Query: 239 RLIKVVGK 262
             +KV GK
Sbjct: 63  GYVKVDGK 70



 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 28/74 (37%), Positives = 36/74 (48%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVR D  YP G MDV+ +   NE +R+I D        RI   EA  K+C+++      
Sbjct: 69  GKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDKTMVK 128

Query: 436 KNVPYLVTHDGRTI 477
                L  HDGR I
Sbjct: 129 AGKIQLNLHDGRNI 142


>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
           Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
           central - Thermofilum pendens (strain Hrk 5)
          Length = 251

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = +2

Query: 29  LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 208
           +    +G  +HL+R  AP  W + +   V+  +PS GPH L   +P+ I LR+   YA T
Sbjct: 1   MGRKVKGSLRHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKT 60

Query: 209 GNEVL*IVKQRLIKVVGK 262
             E   I+  R+I+V G+
Sbjct: 61  MKEARRILASRVIEVDGR 78



 Score = 52.8 bits (121), Expect = 9e-06
 Identities = 26/74 (35%), Positives = 38/74 (51%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G+V TD  +P G MDV+ I    + +R++ D   +     I PEEA YKL +++R  T  
Sbjct: 77  GRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVK 136

Query: 436 KNVPYLVTHDGRTI 477
                   HDGR +
Sbjct: 137 NGDLQFTLHDGRNV 150


>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
           Desulfurococcales|Rep: 30S ribosomal protein S4e -
           Aeropyrum pernix
          Length = 253

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVKRVATG 432
           G VR D  +P GFMDV+ +  T E FR++ Y VK  F +H I  EE   K  +++   T 
Sbjct: 75  GVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIENKTTV 133

Query: 433 PKNVPYLVTHDGRTI--RYPDP 492
                 L  HDGR I  R  DP
Sbjct: 134 KGGHVQLNLHDGRNILVRVKDP 155



 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +2

Query: 38  MAR-GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGN 214
           MAR G ++ LK L AP+ W + +    +A +P  GPH   + LPL++ +RN L YA T  
Sbjct: 1   MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAR 60

Query: 215 EVL*IVKQRLIKVVG 259
           E   ++ +   +V G
Sbjct: 61  EARKLISEGHFRVDG 75



 Score = 37.5 bits (83), Expect = 0.35
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +3

Query: 468 PHHPLSRPTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
           P +P+    Y++  ++ + +   +I   IKF  G + +I GGRN+GRVG
Sbjct: 155 PRNPVE-DVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVG 202


>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
           n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
           protein Faci_03001139 - Ferroplasma acidarmanus fer1
          Length = 241

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATG 432
           G++  D  +P GFMDV+SI+     + ++YD KG+  I +  P     KL K VK+   G
Sbjct: 71  GRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIG 130

Query: 433 PKNVPYLVTHDGRTI 477
              +  L  HDG+TI
Sbjct: 131 TGKI-QLGFHDGKTI 144


>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
           Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
           Nanoarchaeum equitans
          Length = 234

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATG 432
           G+   D  +P G  DV++I + NE +R++ D +G+  + +I  EEA  K  K +++V+  
Sbjct: 75  GRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVR 134

Query: 433 PKNVPYLVTHDGRT 474
              + Y +T DGRT
Sbjct: 135 GGKIQYTLT-DGRT 147



 Score = 42.7 bits (96), Expect = 0.009
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 53  KKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*I 229
           K+HL+ L  P+ W +  K  G +  +PS GPH     +P+ ++LR+ L  A    EV  +
Sbjct: 6   KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYL 65

Query: 230 VKQRLIKVVGK 262
           +    + V G+
Sbjct: 66  LNNGKVLVDGR 76


>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
           Euryarchaeota|Rep: 30S ribosomal protein S4E -
           Uncultured methanogenic archaeon RC-I
          Length = 234

 Score = 46.8 bits (106), Expect = 6e-04
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238
           HLKR+ AP+ W + +    +  +P  G H     +PLV+ LR+ LK A   +E+  I+ +
Sbjct: 5   HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64

Query: 239 RLIKVVGK 262
             + V GK
Sbjct: 65  GKVLVDGK 72



 Score = 44.4 bits (100), Expect = 0.003
 Identities = 24/74 (32%), Positives = 35/74 (47%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GKVR D  Y  G  D +SI   N  +R++  + G+F  H +   +A  K+CK+       
Sbjct: 71  GKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIVNKTALR 128

Query: 436 KNVPYLVTHDGRTI 477
                L  HDG T+
Sbjct: 129 GGKIQLNLHDGTTM 142


>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
           Bigelowiella natans|Rep: 40S ribosomal protein S4 -
           Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 242

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           GK      +P   MD +S    N+ +R++    G+ T++ I   E   K+CKV ++    
Sbjct: 74  GKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINAS 133

Query: 436 KNVPYLVTHDGRTIRYPDPLIKV 504
                ++T D R ++     IKV
Sbjct: 134 SKNKIIITDDLRELKINYAKIKV 156



 Score = 37.5 bits (83), Expect = 0.35
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 38  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
           MA+G KKH KR+++       K  G++  + S+GPH   + + L+  ++     A    E
Sbjct: 1   MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQE 60

Query: 218 VL*IVKQRLIKVVGK 262
              +VK   + V GK
Sbjct: 61  AQKVVKTGFLYVNGK 75


>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
           samples|Rep: Ribosomal protein S4 - uncultured marine
           group II euryarchaeote DeepAnt-JyKC7
          Length = 232

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 26/78 (33%), Positives = 39/78 (50%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G++ TD     G MDV+++ + +  FR I DV G+     I+ + A  KLC+V   +T  
Sbjct: 71  GRIETDLGRGVGLMDVLTVGEDS--FRCILDVNGKLRYRSISDKAAASKLCRVMGKSTIT 128

Query: 436 KNVPYLVTHDGRTIRYPD 489
                +  HDGR I   D
Sbjct: 129 DGKTQIHLHDGRNILVSD 146



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238
           H+KRL  P++W L +   ++  +P+ G H    C+PL + LR+ L  A    E   ++  
Sbjct: 5   HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLAT 64

Query: 239 RLIKVVGK 262
           R + V G+
Sbjct: 65  RQVLVDGR 72


>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
           Euryarchaeota|Rep: 30S ribosomal protein S4e -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 235

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
           G  R D  +P G  DV+++   NE +R++ D KGR  ++++  E    KLC++    T  
Sbjct: 69  GISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNKTTVK 127

Query: 436 KNVPYLVTHDGRTI 477
                L  +DG  I
Sbjct: 128 GGKIQLNLNDGTNI 141



 Score = 40.7 bits (91), Expect = 0.038
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238
           H KRL+ PK+W + + G  +      GPH     LPL + +R+ LK      E   I+ +
Sbjct: 3   HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62

Query: 239 RLIKVVG 259
             + V G
Sbjct: 63  GKVLVDG 69



 Score = 36.7 bits (81), Expect = 0.62
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 495 YQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTSCPARDI 638
           Y ++ S+ L I    ++  +KFE GNL M+ GG++ G  G     R++
Sbjct: 147 YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREV 194


>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
           Methanocorpusculum labreanum Z|Rep: Ribosomal protein
           S4E, central - Methanocorpusculum labreanum (strain ATCC
           43576 / DSM 4855 / Z)
          Length = 239

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 23/65 (35%), Positives = 36/65 (55%)
 Frame = +2

Query: 65  KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQRL 244
           KR+ AP AW + +    Y    S+GPH     LP+ I+LR+ +++AL   EV  I+  R 
Sbjct: 5   KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63

Query: 245 IKVVG 259
           + + G
Sbjct: 64  VLLNG 68



 Score = 34.7 bits (76), Expect = 2.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 429
           G + TD        D++S  K ++ + ++ D KGR   + I+ + AK +L KV    T
Sbjct: 68  GHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANKTT 125


>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
           Methanomicrobiales|Rep: Ribosomal protein S4E, central -
           Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
           / JR1)
          Length = 242

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 429
           G+   D     G  D+VSI K  + +R+  DVKG      I  E AK +LCK++   T
Sbjct: 69  GRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTT 126



 Score = 41.9 bits (94), Expect = 0.016
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = +2

Query: 56  KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVK 235
           K+LKRL AP +W + K    +  + + GPH     LP+ ++LR  +  A   +EV  I+ 
Sbjct: 3   KYLKRLVAPGSWHIPKKVQKFVMKTAPGPHN-AGALPVGVWLREHIGLAQNASEVKKILH 61

Query: 236 QRLIKVVGK 262
           QR + V G+
Sbjct: 62  QRDVLVNGR 70



 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = +3

Query: 480 LSRPTYQSQRSIQLDIATT-----KIMDFIKFESGNLCMITGGRNLGRVG 614
           L+  TY+++ S+ + + T      +I+D   +  GN+ MI GG++ G+VG
Sbjct: 143 LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVG 192


>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
           Methanococcoides burtonii DSM 6242|Rep: Ribosomal
           protein S4E - Methanococcoides burtonii (strain DSM
           6242)
          Length = 236

 Score = 40.7 bits (91), Expect = 0.038
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +3

Query: 495 YQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
           Y ++ SI L +   K++  IK+E GNL MI GG + G VG+
Sbjct: 148 YNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGS 188



 Score = 39.9 bits (89), Expect = 0.066
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRL 193
           H KR++ PK+W + K    +      GPH   + +PL + LR+ L
Sbjct: 4   HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDML 48



 Score = 38.3 bits (85), Expect = 0.20
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +1

Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 417
           G  R D  +P G MD+++I   N  +R++ D K R  ++++    A  KLC+++
Sbjct: 70  GVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIE 122


>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
           Halobacteriaceae|Rep: 30S ribosomal protein S4E -
           Haloarcula marismortui (Halobacterium marismortui)
          Length = 234

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +2

Query: 59  HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQ 238
           H KRL+ P +W +++    +  +   GPH     +PL+I LR+ L YA    E    + +
Sbjct: 4   HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62

Query: 239 RLIKVVGK 262
             + + GK
Sbjct: 63  DNVLINGK 70


>UniRef50_Q890E3 Cluster: Acetyltransferase (GNAT) family; n=1;
           Lactobacillus plantarum|Rep: Acetyltransferase (GNAT)
           family - Lactobacillus plantarum
          Length = 163

 Score = 37.1 bits (82), Expect = 0.47
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 416 SVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTFHPVRHCNYEDYG-LHQV*VRELVYDHG 589
           + WRP+    R W  M+ A +A    +   TF P RH NYE +G L+ + V    + HG
Sbjct: 46  ATWRPE----RRWQNMLLAMTADGEVVGVCTFGPARHANYEGWGELYSLYVHPNYHHHG 100


>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 197

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -3

Query: 751 GSEMYALRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDVP 611
           G   + L A  D EHV + R + ++ GVL VHN EG  + LA  D P
Sbjct: 42  GKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHP 88



 Score = 33.5 bits (73), Expect = 5.8
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = -1

Query: 498 DKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*SKQFIS 319
           D  + + +GAA+++   R+ L          QLVL     D V  ES+L ++D  + FI+
Sbjct: 127 DHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIA 186

Query: 318 LLN*DNI 298
           L + D++
Sbjct: 187 LFDGDDV 193


>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
           Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
           gallus
          Length = 1119

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -2

Query: 728 CPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRCAHAP 603
           C CR   R     RRC PWSP CAQ    C +  RDV    RC   P
Sbjct: 144 CRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDVQGAARCECRP 189


>UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium
           tuberculosis complex|Rep: PROBABLE OXIDASE -
           Mycobacterium bovis
          Length = 504

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 170 PGASTRATCGDRLTVSVHTHRQVCPTSMLWERLSASNAS*GLAPCWTSI 24
           PG   RAT GD + VSV T+R   PTS+ W  ++  N   G  P   +I
Sbjct: 93  PGPLIRATVGDEIVVSV-TNRLGDPTSVHWHGIALRNDMDGTEPATANI 140


>UniRef50_A7EFC4 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 695

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
 Frame = -1

Query: 312 N*DNIHKSSRISRVSPNFPTTFMRRCFTI*RTSFPVKAYFRRFLRK----ITRGKHSRNL 145
           N D+I  SS    VSP++PT+F+     + RT       F   LR     +   + S   
Sbjct: 252 NSDSIQSSSIPELVSPSYPTSFVHLVQPVLRTDLGAYDDFISLLRMSKNIVVGSRASSGS 311

Query: 144 WGPVD---GLGAYTPPSLSNIHALGAF 73
           +G +    GLGAYT  S S+I  LG +
Sbjct: 312 YGAIGLGLGLGAYT-GSTSSISTLGTY 337


>UniRef50_A6SQK8 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 540

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
 Frame = -1

Query: 375 TVDCESALNIID*SKQFISLLN*DNIHKSSRISRVSPNFPTTFMRRCFTI*RTSFPVKAY 196
           T     ALN  D  ++  ++ N D+I  SS    VSP++PT+F+     + RT       
Sbjct: 137 TAPSTPALNQTDRKEE--NMHNSDSIQSSSIPEPVSPSYPTSFLHLIQPVLRTDLGAYDD 194

Query: 195 F---RRFLRKITRGKHSRNLWGPVD---GLGAYTPPS 103
           F    R  R +   + S   +G +    GLGAYT  S
Sbjct: 195 FISLLRMSRNVVGSRVSSGSYGGIGLGLGLGAYTGSS 231


>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
           Picrophilus torridus|Rep: 30S ribosomal protein S4e -
           Picrophilus torridus
          Length = 234

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 510 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
           S+ + I   +I+D +KF  GN   ITGG ++G + T
Sbjct: 153 SVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIAT 188


>UniRef50_Q3W9H9 Cluster: Short-chain dehydrogenase/reductase SDR;
           n=3; Actinomycetales|Rep: Short-chain
           dehydrogenase/reductase SDR - Frankia sp. EAN1pec
          Length = 390

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +1

Query: 610 WAHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGRTSRCR 753
           + HRV R   R   H   Q   G H  H+   R+  R G  G  SR R
Sbjct: 18  YQHRVSRRADRRPGHWLLQRHQGGHPAHDTSARLRTRPGRPGERSRTR 65


>UniRef50_A6E8K7 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 195

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -1

Query: 213 FPVKAYFRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKRFK---CFLGPR 43
           F  KA FR+ +RK+  G+H+      +D   A+T PSL   H     KR++    F+G R
Sbjct: 15  FFFKARFRKLIRKL--GRHTEVYLVDIDNTLAHTWPSLQQRHYSAENKRYRSLPIFIGMR 72

Query: 42  AML 34
           + L
Sbjct: 73  SYL 75


>UniRef50_Q18ED9 Cluster: Cell surface calcium-binding acidic-repeat
           protein; n=1; Haloquadratum walsbyi DSM 16790|Rep: Cell
           surface calcium-binding acidic-repeat protein -
           Haloquadratum walsbyi (strain DSM 16790)
          Length = 830

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 594 RNLGRVGTSCPARDIPAPS-TLCTSRTPRDTPSP 692
           R+ G +G  CPAR  P P+ T   + TP  TP+P
Sbjct: 498 RDSGSLGKGCPARTTPTPTPTPTDTPTPTSTPTP 531


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,864,590
Number of Sequences: 1657284
Number of extensions: 18730705
Number of successful extensions: 54468
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 51619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54445
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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