Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1114
(756 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.49
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 0.49
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.5
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 6.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 6.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 6.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 6.1
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 25.4 bits (53), Expect = 0.49
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 586 REAVTWGAWAHRVPRETSRLLRHCAHQGLHGTHLRHEV 699
RE +TW H R +R R C H GT +R +
Sbjct: 593 REQLTWRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSI 630
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 25.4 bits (53), Expect = 0.49
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 586 REAVTWGAWAHRVPRETSRLLRHCAHQGLHGTHLRHEV 699
RE +TW H R +R R C H GT +R +
Sbjct: 485 REQLTWRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSI 522
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 176 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 81
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 68
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A+ P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -2
Query: 170 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 81
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -2
Query: 170 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 81
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 582 ITGGRNLGRVGTSCPARDIPAPSTLCTSRTPRDTPSPR 695
+T R P R+ +P++ S TPR T R
Sbjct: 916 LTSPRQPAETHAGSPCRNSASPASSDRSGTPRSTNGDR 953
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.1
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +1
Query: 370 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNVPS 516
H + P Y + +R+A P TH + +Y D V S
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVAS 112
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,970
Number of Sequences: 336
Number of extensions: 4369
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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