Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1114
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 151 3e-36
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 151 3e-36
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 151 3e-36
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 151 3e-36
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 151 3e-36
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 151 3e-36
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 151 3e-36
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 151 3e-36
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 151 3e-36
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 151 3e-36
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 145 1e-34
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 145 1e-34
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 145 1e-34
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 145 1e-34
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 145 1e-34
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 145 1e-34
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 140 7e-33
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 9e-25
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.9
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF261093-2|AAG13905.1| 142|Homo sapiens Thy-1 co-transcribed pr... 31 5.9
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 55 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 114
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 115 KGIPHLVTHDARTIRYPDPLIKVN 138
Score = 92.3 bits (219), Expect = 2e-18
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +2
Query: 92 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQRLIKVVGK 262
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV I QR IK+ GK
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 56
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 170 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 214
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 133 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 174
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 54 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 113
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 114 KGIPHLVTHDARTIRYPDPLIKVN 137
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = +2
Query: 98 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL*IVKQRLIKVVGK 262
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV I QR IK+ GK
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 55
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 169 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 213
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 132 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 173
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 130 bits (313), Expect = 7e-30
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 151 bits (365), Expect = 3e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 132 bits (318), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 73.7 bits (173), Expect = 6e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + +IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDP+IKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVN 157
Score = 131 bits (317), Expect = 2e-30
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 71.7 bits (168), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG G K
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 152 PVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 145 bits (352), Expect = 1e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 73 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 132
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDP+IKVN
Sbjct: 133 KGIPHLVTHDARTIRYPDPVIKVN 156
Score = 129 bits (312), Expect = 9e-30
Identities = 59/74 (79%), Positives = 65/74 (87%)
Frame = +2
Query: 41 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 220
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 221 L*IVKQRLIKVVGK 262
I QR IK+ GK
Sbjct: 61 KKICMQRFIKIDGK 74
Score = 71.7 bits (168), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG G K
Sbjct: 188 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 232
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 151 PVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 192
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDP+IKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVN 157
Score = 131 bits (317), Expect = 2e-30
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 71.7 bits (168), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG G K
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 152 PVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDP+IKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVN 157
Score = 131 bits (317), Expect = 2e-30
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 71.7 bits (168), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG G K
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 152 PVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDP+IKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVN 157
Score = 131 bits (317), Expect = 2e-30
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 68.9 bits (161), Expect = 2e-11
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSF +VH+KD+ G++FATRL+N+F+IG G K
Sbjct: 189 LGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNK 233
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 152 PVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDP+IKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVN 157
Score = 131 bits (317), Expect = 2e-30
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I QR IK+ GK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 71.7 bits (168), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG G K
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 152 PVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 140 bits (338), Expect = 7e-33
Identities = 61/84 (72%), Positives = 71/84 (84%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGT 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K +P+LVTHD RTIRYPDPLIKVN
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVN 157
Score = 128 bits (310), Expect = 2e-29
Identities = 58/75 (77%), Positives = 65/75 (86%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 218 VL*IVKQRLIKVVGK 262
V I Q +K+ GK
Sbjct: 61 VKKICMQHFLKIDGK 75
Score = 67.7 bits (158), Expect = 4e-11
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G I +RERHPGS D+VH+KD+ G++FATR++N+F+IG G K
Sbjct: 189 LGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 614
P + ++Q+D+ T KI FIKF++GN+CM+ G NLGRVG
Sbjct: 152 PLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVG 193
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 9e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 205
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 277 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 423
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 277 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 423
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AF261093-2|AAG13905.1| 142|Homo sapiens Thy-1 co-transcribed
protein protein.
Length = 142
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 588 GGRNLGRVGTSCPARDIPAPSTLCTSRTPRDTPSPR 695
G + + GTS P +PAP+ C S P D+P PR
Sbjct: 66 GLAQVSKGGTSSPRPSVPAPAGWCLS--PSDSPLPR 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,485,024
Number of Sequences: 237096
Number of extensions: 2995080
Number of successful extensions: 16489
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 16043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16486
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -