Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1114
(756 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 150 2e-36
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 150 2e-36
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 150 2e-36
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 150 2e-36
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 29 5.2
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 29 5.2
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 29 5.2
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 29 5.2
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 29 5.2
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 29 5.2
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 29 6.8
AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 29 6.8
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 29 6.8
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 9.1
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 9.1
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 9.1
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 150 bits (363), Expect = 2e-36
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K VP+LVTHDGRTIRYPDPLI N
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHAN 157
Score = 133 bits (322), Expect = 2e-31
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 218 VL*IVKQRLIKVVGK 262
V IV QRL+KV GK
Sbjct: 61 VTKIVMQRLVKVYGK 75
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G +V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Score = 68.5 bits (160), Expect = 9e-12
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
P + S+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 150 bits (363), Expect = 2e-36
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K VP+LVTHDGRTIRYPDPLI N
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHAN 157
Score = 134 bits (325), Expect = 9e-32
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 218 VL*IVKQRLIKVVGK 262
V IV QRL+KV GK
Sbjct: 61 VTKIVMQRLVKVDGK 75
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G +V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Score = 68.5 bits (160), Expect = 9e-12
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
P + S+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 150 bits (363), Expect = 2e-36
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K VP+LVTHDGRTIRYPDPLI N
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHAN 157
Score = 134 bits (325), Expect = 9e-32
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 218 VL*IVKQRLIKVVGK 262
V IV QRL+KV GK
Sbjct: 61 VTKIVMQRLVKVDGK 75
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G +V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Score = 68.5 bits (160), Expect = 9e-12
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
P + S+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 150 bits (363), Expect = 2e-36
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +1
Query: 256 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 435
GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 436 KNVPYLVTHDGRTIRYPDPLIKVN 507
K VP+LVTHDGRTIRYPDPLI N
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHAN 157
Score = 134 bits (325), Expect = 9e-32
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 218 VL*IVKQRLIKVVGK 262
V IV QRL+KV GK
Sbjct: 61 VTKIVMQRLVKVDGK 75
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +2
Query: 599 LGARGHIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 733
LG G +V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Score = 68.5 bits (160), Expect = 9e-12
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 489 PTYQSQRSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 617
P + S+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 697 PRGEGVSRGVLDVHNVEGAGMSLAGHDVPTRPKLRPPVIIHKFPDSNL 554
P G+GV +H+ G+S A PT P+ PP + KF +L
Sbjct: 696 PSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDL 743
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 697 PRGEGVSRGVLDVHNVEGAGMSLAGHDVPTRPKLRPPVIIHKFPDSNL 554
P G+GV +H+ G+S A PT P+ PP + KF +L
Sbjct: 696 PSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDL 743
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 697 PRGEGVSRGVLDVHNVEGAGMSLAGHDVPTRPKLRPPVIIHKFPDSNL 554
P G+GV +H+ G+S A PT P+ PP + KF +L
Sbjct: 696 PSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDL 743
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 697 PRGEGVSRGVLDVHNVEGAGMSLAGHDVPTRPKLRPPVIIHKFPDSNL 554
P G+GV +H+ G+S A PT P+ PP + KF +L
Sbjct: 696 PSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDL 743
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 697 PRGEGVSRGVLDVHNVEGAGMSLAGHDVPTRPKLRPPVIIHKFPDSNL 554
P G+GV +H+ G+S A PT P+ PP + KF +L
Sbjct: 696 PSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDL 743
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 697 PRGEGVSRGVLDVHNVEGAGMSLAGHDVPTRPKLRPPVIIHKFPDSNL 554
P G+GV +H+ G+S A PT P+ PP + KF +L
Sbjct: 696 PSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDL 743
>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
protein.
Length = 1098
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 73 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPLNCETTPHK 249
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p
protein.
Length = 561
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 73 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPLNCETTPHK 249
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 18 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74
>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
protein.
Length = 1098
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 73 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPLNCETTPHK 249
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 474 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*SKQFISL 316
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 474 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*SKQFISL 316
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 474 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*SKQFISL 316
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,859,779
Number of Sequences: 53049
Number of extensions: 907371
Number of successful extensions: 2656
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2653
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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