Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1113
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 266 FIFSFYCMQTIYV 304
           F+ +FYCM  +Y+
Sbjct: 316 FMIAFYCMTLLYI 328


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 266 FIFSFYCMQTIYV 304
           F+ +FYCM  +Y+
Sbjct: 316 FMIAFYCMTLLYI 328


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  IFSFYCMQTIYVPAFFILQL 328
            +F+F+    ++V   F+LQL
Sbjct: 1269 VFAFFMFNALFVLVVFLLQL 1288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  IFSFYCMQTIYVPAFFILQL 328
            +F+F+    ++V   F+LQL
Sbjct: 1269 VFAFFMFNALFVLVVFLLQL 1288


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 557 CFIYYYVYSFWQ 522
           C I +++Y +WQ
Sbjct: 16  CCILFFIYLYWQ 27


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 593 FVYY*HINIKLHCFIYYYVYSFWQS 519
           F+ Y    + L  +IY   YS+WQS
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQS 26


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  IFSFYCMQTIYVPAFFILQL 328
            +F+F+ M  ++V   F+L L
Sbjct: 1269 VFAFFMMNALFVLIVFLLTL 1288


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  IFSFYCMQTIYVPAFFILQL 328
            +F+F  + ++YV   F+L L
Sbjct: 1226 VFTFLMLNSLYVIVIFLLTL 1245


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  IFSFYCMQTIYVPAFFILQL 328
            +F+F  + ++YV   F+L L
Sbjct: 1226 VFTFLMLNSLYVIVIFLLTL 1245


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  IFSFYCMQTIYVPAFFILQL 328
            +F+F+ M  ++V   F+L L
Sbjct: 1269 VFAFFMMNALFVLIVFLLTL 1288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,285
Number of Sequences: 336
Number of extensions: 3353
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)