Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1111
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.61 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 21/79 (26%), Positives = 36/79 (45%)
 Frame = +2

Query: 203 SMFFVCFPLFKINIFFCINLVTTCKSNLIDQGVLRISIIGTDILEKCAFQILNSC*VFMN 382
           S+ F C+ L +I  F+C+++  T   +L+   +L        +L  C F I     V   
Sbjct: 45  SLVFKCYNLRRIYYFYCVSI--TFNVHLL--FLLCSGYFTVHLLFYCPFIIFT---VHFL 97

Query: 383 ITAYKFNRTYLILVLK*YF 439
           +  Y F   ++IL+   YF
Sbjct: 98  LCTYYFYYAFIILLCVYYF 116


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +3

Query: 159 IWIATM----LQTVYTQYCLCFLFVSLYLKLTFSSAL 257
           +WI  M    LQ  YT +  C L+V L   LT++ +L
Sbjct: 156 VWICEMGVVTLQA-YTLHLFCVLYVVLLHFLTYNLSL 191


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +3

Query: 159 IWIATM----LQTVYTQYCLCFLFVSLYLKLTFSSAL 257
           +WI  M    LQ  YT +  C L+V L   LT++ +L
Sbjct: 156 VWICEMGVVTLQA-YTLHLFCVLYVVLLHFLTYNLSL 191


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 162 WIATMLQTVYTQYCLCFLFVSLYLKLTFSSAL 257
           ++  M+Q   TQ      FVS + K+ F S L
Sbjct: 342 FLIVMIQFEMTQNSTNINFVSTFFKIPFYSTL 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,143
Number of Sequences: 336
Number of extensions: 2557
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)