Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1111
         (577 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069497-1|AAL39642.1|  602|Drosophila melanogaster LD22344p pro...    34   0.16 
AE014134-1751|AAF52846.3|  602|Drosophila melanogaster CG4747-PA...    34   0.16 
DQ138866-1|ABA86472.1| 1024|Drosophila melanogaster CG10719 prot...    31   1.5  
AY129441-1|AAM76183.1| 1095|Drosophila melanogaster LD16270p pro...    31   1.5  
AY122207-1|AAM52719.1|  357|Drosophila melanogaster LP03649p pro...    31   1.5  
AF195873-1|AAF13929.1| 1037|Drosophila melanogaster brain tumor ...    31   1.5  
AF195872-1|AAF13928.1| 1037|Drosophila melanogaster brain tumor ...    31   1.5  
AF119332-1|AAF03086.1| 1037|Drosophila melanogaster brain tumor ...    31   1.5  
AE014134-3055|AAS64719.1| 1037|Drosophila melanogaster CG10719-P...    31   1.5  
AE014134-3054|AAF53771.1| 1037|Drosophila melanogaster CG10719-P...    31   1.5  
AE014134-3053|AAN11027.1| 1037|Drosophila melanogaster CG10719-P...    31   1.5  
AB022432-1|BAA82071.1| 1037|Drosophila melanogaster transcriptio...    31   1.5  

>AY069497-1|AAL39642.1|  602|Drosophila melanogaster LD22344p
           protein.
          Length = 602

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 218 CFPLFKINIFFCINLVTTCKSNLIDQGVLRISIIG 322
           CF     N FF  N+   CK NLI Q +L +S++G
Sbjct: 465 CFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVG 499


>AE014134-1751|AAF52846.3|  602|Drosophila melanogaster CG4747-PA
           protein.
          Length = 602

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 218 CFPLFKINIFFCINLVTTCKSNLIDQGVLRISIIG 322
           CF     N FF  N+   CK NLI Q +L +S++G
Sbjct: 465 CFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVG 499


>DQ138866-1|ABA86472.1| 1024|Drosophila melanogaster CG10719 protein.
          Length = 1024

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 916  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 944


>AY129441-1|AAM76183.1| 1095|Drosophila melanogaster LD16270p protein.
          Length = 1095

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 981  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 1009


>AY122207-1|AAM52719.1|  357|Drosophila melanogaster LP03649p
           protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265 NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
           ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 243 NDKQEIFISDNRAHCVKVFNYEGQYLRQI 271


>AF195873-1|AAF13929.1| 1037|Drosophila melanogaster brain tumor
            protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


>AF195872-1|AAF13928.1| 1037|Drosophila melanogaster brain tumor
            protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


>AF119332-1|AAF03086.1| 1037|Drosophila melanogaster brain tumor
            protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


>AE014134-3055|AAS64719.1| 1037|Drosophila melanogaster CG10719-PC,
            isoform C protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


>AE014134-3054|AAF53771.1| 1037|Drosophila melanogaster CG10719-PB,
            isoform B protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


>AE014134-3053|AAN11027.1| 1037|Drosophila melanogaster CG10719-PA,
            isoform A protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


>AB022432-1|BAA82071.1| 1037|Drosophila melanogaster transcription
            factor protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 265  NDMQK*F---NRSRCIKDFNYRHRYIRKV 342
            ND Q+ F   NR+ C+K FNY  +Y+R++
Sbjct: 923  NDKQEIFISDNRAHCVKVFNYEGQYLRQI 951


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,819,172
Number of Sequences: 53049
Number of extensions: 420206
Number of successful extensions: 1075
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)