Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1111
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 5.0
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 5.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 5.0
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 22 5.0
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 6.6
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 6.6
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 8.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.7
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 8.7
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 8.7
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 8.7
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 197 ILSMFFVCFPLFKINIFFCINLVTT-CKS 280
I+ +F +C+ F FC+N+VT+ CK+
Sbjct: 277 IMGVFLICWVPF-----FCVNIVTSYCKT 300
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 525 KTHAHMNSIQDNLNRFENVSLNILIPNSMKYYFNTKIKYV 406
K H ++S+ +N N N + N K Y+N I Y+
Sbjct: 77 KEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYN--INYI 114
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 525 KTHAHMNSIQDNLNRFENVSLNILIPNSMKYYFNTKIKYV 406
K H ++S+ +N N N + N K Y+N I Y+
Sbjct: 77 KEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYN--INYI 114
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 525 KTHAHMNSIQDNLNRFENVSLNILIPNSMKYYFNTKIKYV 406
K H ++S+ +N N N + N K Y+N I Y+
Sbjct: 77 KEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYN--INYI 114
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 291 SIKLLLHVVTRLMQKKMLILNRGKQTKNIDNIVCKQ 184
++ L+L + M KKM I K KN+ + K+
Sbjct: 11 ALLLVLLAIEDTMSKKMTIEEAKKTIKNLRKVCSKK 46
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 66 SFVDRQGAPRAGEVDFDSEDRR 1
S +D+Q EV+FD ED +
Sbjct: 37 SGIDQQTVDDINEVNFDVEDEK 58
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 66 SFVDRQGAPRAGEVDFDSEDRR 1
S +D+Q EV+FD ED +
Sbjct: 37 SGIDQQTVDDINEVNFDVEDEK 58
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 73 GGDVVACWYEHR 108
G + CW EHR
Sbjct: 323 GDSALGCWNEHR 334
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -2
Query: 255 MQKKMLILNRGKQTKNIDNIVCKQFVTWSRSRCCQ 151
++K L LN I N++C + S C Q
Sbjct: 263 VRKATLFLNMASVFMRIFNLICMMLLIGHWSGCLQ 297
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 73 GGDVVACWYEHR 108
G + CW EHR
Sbjct: 323 GDSALGCWNEHR 334
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 73 GGDVVACWYEHR 108
G + CW EHR
Sbjct: 323 GDSALGCWNEHR 334
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 73 GGDVVACWYEHR 108
G V CW EH+
Sbjct: 321 GNSAVGCWNEHQ 332
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,492
Number of Sequences: 438
Number of extensions: 2876
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -