BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1111 (577 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.6 DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 5.0 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 5.0 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 5.0 AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 22 5.0 DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 6.6 DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 6.6 D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 8.7 AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.7 AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 8.7 AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 8.7 AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 8.7 >Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 protein. Length = 402 Score = 23.4 bits (48), Expect = 1.6 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +2 Query: 197 ILSMFFVCFPLFKINIFFCINLVTT-CKS 280 I+ +F +C+ F FC+N+VT+ CK+ Sbjct: 277 IMGVFLICWVPF-----FCVNIVTSYCKT 300 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.8 bits (44), Expect = 5.0 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 525 KTHAHMNSIQDNLNRFENVSLNILIPNSMKYYFNTKIKYV 406 K H ++S+ +N N N + N K Y+N I Y+ Sbjct: 77 KEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYN--INYI 114 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.8 bits (44), Expect = 5.0 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 525 KTHAHMNSIQDNLNRFENVSLNILIPNSMKYYFNTKIKYV 406 K H ++S+ +N N N + N K Y+N I Y+ Sbjct: 77 KEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYN--INYI 114 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.8 bits (44), Expect = 5.0 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 525 KTHAHMNSIQDNLNRFENVSLNILIPNSMKYYFNTKIKYV 406 K H ++S+ +N N N + N K Y+N I Y+ Sbjct: 77 KEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYN--INYI 114 >AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein ASP6 protein. Length = 146 Score = 21.8 bits (44), Expect = 5.0 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -2 Query: 291 SIKLLLHVVTRLMQKKMLILNRGKQTKNIDNIVCKQ 184 ++ L+L + M KKM I K KN+ + K+ Sbjct: 11 ALLLVLLAIEDTMSKKMTIEEAKKTIKNLRKVCSKK 46 >DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. Length = 135 Score = 21.4 bits (43), Expect = 6.6 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 66 SFVDRQGAPRAGEVDFDSEDRR 1 S +D+Q EV+FD ED + Sbjct: 37 SGIDQQTVDDINEVNFDVEDEK 58 >DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. Length = 135 Score = 21.4 bits (43), Expect = 6.6 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 66 SFVDRQGAPRAGEVDFDSEDRR 1 S +D+Q EV+FD ED + Sbjct: 37 SGIDQQTVDDINEVNFDVEDEK 58 >D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. Length = 432 Score = 21.0 bits (42), Expect = 8.7 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +1 Query: 73 GGDVVACWYEHR 108 G + CW EHR Sbjct: 323 GDSALGCWNEHR 334 >AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-activated ion channelvariant L protein. Length = 664 Score = 21.0 bits (42), Expect = 8.7 Identities = 10/35 (28%), Positives = 15/35 (42%) Frame = -2 Query: 255 MQKKMLILNRGKQTKNIDNIVCKQFVTWSRSRCCQ 151 ++K L LN I N++C + S C Q Sbjct: 263 VRKATLFLNMASVFMRIFNLICMMLLIGHWSGCLQ 297 >AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly protein MRJP1 protein. Length = 432 Score = 21.0 bits (42), Expect = 8.7 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +1 Query: 73 GGDVVACWYEHR 108 G + CW EHR Sbjct: 323 GDSALGCWNEHR 334 >AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly protein MRJP1 protein. Length = 432 Score = 21.0 bits (42), Expect = 8.7 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +1 Query: 73 GGDVVACWYEHR 108 G + CW EHR Sbjct: 323 GDSALGCWNEHR 334 >AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly protein MRJP2 protein. Length = 452 Score = 21.0 bits (42), Expect = 8.7 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +1 Query: 73 GGDVVACWYEHR 108 G V CW EH+ Sbjct: 321 GNSAVGCWNEHQ 332 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 140,492 Number of Sequences: 438 Number of extensions: 2876 Number of successful extensions: 13 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 16626408 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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