Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1110
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    25   3.3  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    24   5.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.7  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.5  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   10.0 

>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 372 DRRQHPHYDKADEALITTAVTFLRHVLERTXS-HKSCYIYNIITTYCDG 229
           D    P + +A  A+  T    +R +L    +  K   ++ +IT+YCDG
Sbjct: 117 DENHDPLFGRALFAMRDTRWRNMRTILSPAFTGSKMRLMFGLITSYCDG 165


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 188 FNTNAKTYSDVDVEKNTI 135
           FNT  K+  D++ EKNT+
Sbjct: 428 FNTFCKSEKDMNCEKNTV 445


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 276  HKSCYI--YN-IITTYCDGTQSFYTF 208
            + SCY   YN ++TT C GT S Y +
Sbjct: 3115 YSSCYPIEYNGLLTTACAGTNSSYMY 3140


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 276  HKSCYI--YN-IITTYCDGTQSFYTF 208
            + SCY   YN ++TT C GT S Y +
Sbjct: 3118 YSSCYPIEYNGLLTTACAGTNSSYMY 3143


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = -1

Query: 369 RRQHPHYDKADE---ALITTAVTFLRHVLE---RTXSHKSCYIYNIITTYCDGTQSFYTF 208
           R  H  +DK      A+    V+F  ++ E    T  H   YI  +  T C+    F TF
Sbjct: 9   RLPHVAFDKEQRIKAAISRERVSFTENLREYCLNTTIHGLKYIGTVSLTLCERAYFFLTF 68

Query: 207 ILI 199
           +++
Sbjct: 69  LVV 71


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 306 LRHVLERTXSHKSCYIYNIITTYCDGTQSFYTFILI 199
           LR     T  H   YI  +  T C+    F TF+++
Sbjct: 36  LREYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLVV 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,087
Number of Sequences: 2352
Number of extensions: 17194
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)