BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1110 (744 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 25 3.3 DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 24 5.7 AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.7 AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 5.7 AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 7.5 AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 10.0 >AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CYP9K1 protein. Length = 531 Score = 24.6 bits (51), Expect = 3.3 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -1 Query: 372 DRRQHPHYDKADEALITTAVTFLRHVLERTXS-HKSCYIYNIITTYCDG 229 D P + +A A+ T +R +L + K ++ +IT+YCDG Sbjct: 117 DENHDPLFGRALFAMRDTRWRNMRTILSPAFTGSKMRLMFGLITSYCDG 165 >DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosyltransferase 2 protein. Length = 451 Score = 23.8 bits (49), Expect = 5.7 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 188 FNTNAKTYSDVDVEKNTI 135 FNT K+ D++ EKNT+ Sbjct: 428 FNTFCKSEKDMNCEKNTV 445 >AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. Length = 3320 Score = 23.8 bits (49), Expect = 5.7 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = -1 Query: 276 HKSCYI--YN-IITTYCDGTQSFYTF 208 + SCY YN ++TT C GT S Y + Sbjct: 3115 YSSCYPIEYNGLLTTACAGTNSSYMY 3140 >AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. Length = 3318 Score = 23.8 bits (49), Expect = 5.7 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = -1 Query: 276 HKSCYI--YN-IITTYCDGTQSFYTF 208 + SCY YN ++TT C GT S Y + Sbjct: 3118 YSSCYPIEYNGLLTTACAGTNSSYMY 3143 >AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel protein. Length = 574 Score = 23.4 bits (48), Expect = 7.5 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Frame = -1 Query: 369 RRQHPHYDKADE---ALITTAVTFLRHVLE---RTXSHKSCYIYNIITTYCDGTQSFYTF 208 R H +DK A+ V+F ++ E T H YI + T C+ F TF Sbjct: 9 RLPHVAFDKEQRIKAAISRERVSFTENLREYCLNTTIHGLKYIGTVSLTLCERAYFFLTF 68 Query: 207 ILI 199 +++ Sbjct: 69 LVV 71 >AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium channel protein. Length = 572 Score = 23.0 bits (47), Expect = 10.0 Identities = 11/36 (30%), Positives = 16/36 (44%) Frame = -1 Query: 306 LRHVLERTXSHKSCYIYNIITTYCDGTQSFYTFILI 199 LR T H YI + T C+ F TF+++ Sbjct: 36 LREYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLVV 71 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 786,087 Number of Sequences: 2352 Number of extensions: 17194 Number of successful extensions: 29 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 29 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 76507752 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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