BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1110 (744 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT011191-1|AAR88552.1| 391|Drosophila melanogaster LP08442p pro... 32 0.95 AE014298-643|AAF45958.1| 630|Drosophila melanogaster CG3546-PA ... 32 0.95 >BT011191-1|AAR88552.1| 391|Drosophila melanogaster LP08442p protein. Length = 391 Score = 31.9 bits (69), Expect = 0.95 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 519 LTAIQGPDPSRCPPST*LGRLTIKPTIADV-YPSNGVK-YPFNMPWDLTFQDRRQHPHYD 346 + +Q P + P T +KP +DV + S GV YPF PW++ D+ + YD Sbjct: 199 IVVVQSHQPPKVNPDT-HAVFELKPVQSDVVHQSAGVSFYPFVQPWEVV--DQHEDDDYD 255 Query: 345 KAD 337 + D Sbjct: 256 EDD 258 >AE014298-643|AAF45958.1| 630|Drosophila melanogaster CG3546-PA protein. Length = 630 Score = 31.9 bits (69), Expect = 0.95 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 519 LTAIQGPDPSRCPPST*LGRLTIKPTIADV-YPSNGVK-YPFNMPWDLTFQDRRQHPHYD 346 + +Q P + P T +KP +DV + S GV YPF PW++ D+ + YD Sbjct: 187 IVVVQSHQPPKVNPDT-HAVFELKPVQSDVVHQSAGVSFYPFVQPWEVV--DQHEDDDYD 243 Query: 345 KAD 337 + D Sbjct: 244 EDD 246 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 32,871,182 Number of Sequences: 53049 Number of extensions: 747025 Number of successful extensions: 1853 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1853 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3375989364 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -