Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1109
(721 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 130 4e-29
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 127 3e-28
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 126 5e-28
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 126 7e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 124 2e-27
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 124 2e-27
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 124 3e-27
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 123 4e-27
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 121 2e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 118 1e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 116 8e-25
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 116 8e-25
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 115 1e-24
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 114 2e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 113 5e-24
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 111 2e-23
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 109 5e-23
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 100 4e-20
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 100 4e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 99 5e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 99 5e-20
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 96 7e-19
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 95 2e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 3e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 93 6e-18
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 90 4e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 88 2e-16
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 88 2e-16
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 86 7e-16
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 84 3e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 84 3e-15
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 83 9e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 9e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 2e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 82 2e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 81 2e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 8e-14
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 78 3e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 77 3e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 1e-12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 76 1e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 1e-12
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 75 1e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 75 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 2e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 75 2e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 3e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 74 3e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 74 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 4e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 7e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 72 1e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 72 2e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 2e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 71 3e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 71 3e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 71 3e-11
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 70 5e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 69 2e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 68 2e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 68 3e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 67 4e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 67 5e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 67 5e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 66 6e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 66 8e-10
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 66 8e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 66 8e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 66 1e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 65 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 3e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 64 4e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 63 8e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 62 1e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 62 2e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 62 2e-08
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 62 2e-08
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 62 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 61 2e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 60 5e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 9e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 3e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 56 1e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 55 2e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 55 2e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 53 8e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 52 1e-05
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 51 2e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 50 6e-05
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 50 8e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 46 0.001
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 41 0.027
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 41 0.027
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 41 0.035
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 40 0.082
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.11
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.58
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 37 0.58
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.58
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 36 0.76
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 36 1.3
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.3
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 2.3
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 34 3.1
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 34 3.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 4.1
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 34 4.1
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 34 4.1
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 7.1
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 9.4
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 130 bits (313), Expect = 4e-29
Identities = 61/80 (76%), Positives = 67/80 (83%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Query: 441 HPEVYILILPGFGIISHIIS 500
HPEVYILILPGFGIISHI+S
Sbjct: 243 HPEVYILILPGFGIISHIVS 262
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL
Sbjct: 96 AFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHL 155
Query: 181 AGIS 192
+G+S
Sbjct: 156 SGVS 159
Score = 56.0 bits (129), Expect = 9e-07
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
F+V AHH+FTVG+D+DTRAYFT+AT+IIAV +K
Sbjct: 287 FLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIK 321
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 127 bits (306), Expect = 3e-28
Identities = 61/88 (69%), Positives = 69/88 (78%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FF
Sbjct: 163 DKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFF 222
Query: 438 GHPEVYILILPGFGIISHIISQEREKKK 521
GHPEVYILILPGFGIISH+I E KK+
Sbjct: 223 GHPEVYILILPGFGIISHMIFNESGKKE 250
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = +2
Query: 497 FTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQEL 676
F GKKETF FIV AHH+FT+G+D+DTRAYFTSAT+IIA+ +
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGI 302
Query: 677 KFLDD*LQYMELKLI 721
K + +KL+
Sbjct: 303 KIFSWMATFSGVKLM 317
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
+FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHL
Sbjct: 77 SFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHL 136
Query: 181 AGIS 192
AG S
Sbjct: 137 AGAS 140
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 126 bits (304), Expect = 5e-28
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFG
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFG 239
Query: 441 HPEVYILILPGFGIISHIIS 500
HPEVYILI+PGFG++SHI+S
Sbjct: 240 HPEVYILIIPGFGMVSHIVS 259
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 181 AGIS 192
+GIS
Sbjct: 153 SGIS 156
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
F+V +HH++ VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 284 FLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIK 318
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 126 bits (303), Expect = 7e-28
Identities = 60/87 (68%), Positives = 67/87 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 441 HPEVYILILPGFGIISHIISQEREKKK 521
HPEVYILILPGFGIISH+++ KK+
Sbjct: 240 HPEVYILILPGFGIISHVVAYYAGKKE 266
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
Query: 181 AGIS 192
AG+S
Sbjct: 153 AGVS 156
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 509 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+ +K
Sbjct: 263 GKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVK 319
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 124 bits (299), Expect = 2e-27
Identities = 60/87 (68%), Positives = 67/87 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 441 HPEVYILILPGFGIISHIISQEREKKK 521
HPEVYILILPGFG+ISHI++ KK+
Sbjct: 240 HPEVYILILPGFGMISHIVTYYSGKKE 266
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHL 152
Query: 181 AGIS 192
AG+S
Sbjct: 153 AGVS 156
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 464 FTRIWYNFSYYFTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 643
F I + +YY GKKE F FIV AHH+FTVG+D+DTRAYFTS
Sbjct: 251 FGMISHIVTYY---SGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTS 307
Query: 644 ATIIIAVQQELK 679
AT+IIA+ +K
Sbjct: 308 ATMIIAIPTGVK 319
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 124 bits (299), Expect = 2e-27
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFG
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFG 247
Query: 441 HPEVYILILPGFGIISHIIS 500
HPEVYILILPGFG+ISHI+S
Sbjct: 248 HPEVYILILPGFGMISHIVS 267
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH+
Sbjct: 101 AFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHI 160
Query: 181 AGIS 192
+G S
Sbjct: 161 SGAS 164
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
FIV AHH++TVG+D+DTRAYFT+AT+IIAV +K
Sbjct: 292 FIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIK 326
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 124 bits (298), Expect = 3e-27
Identities = 59/87 (67%), Positives = 67/87 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
Query: 441 HPEVYILILPGFGIISHIISQEREKKK 521
HPEVYILILPGFG+ISH+++ KK+
Sbjct: 241 HPEVYILILPGFGMISHVVTYYAGKKE 267
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/64 (62%), Positives = 44/64 (68%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHL
Sbjct: 94 AFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHL 153
Query: 181 AGIS 192
AGIS
Sbjct: 154 AGIS 157
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 123 bits (297), Expect = 4e-27
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 441 HPEVYILILPGFGIISHIISQEREKKK 521
HPEVYILILPGFG+ISH+++ KK+
Sbjct: 240 HPEVYILILPGFGMISHVVTYYAGKKE 266
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
Query: 181 AGIS 192
AG+S
Sbjct: 153 AGVS 156
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 464 FTRIWYNFSYYFTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 643
F I + +YY GKKE F FIV AHH+FTVG+D+DTRAYFTS
Sbjct: 251 FGMISHVVTYY---AGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTS 307
Query: 644 ATIIIAVQQELK 679
AT+IIA+ +K
Sbjct: 308 ATMIIAIPTGVK 319
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 121 bits (292), Expect = 2e-26
Identities = 66/110 (60%), Positives = 73/110 (66%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
DQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FF
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 235
Query: 438 GHPEVYILILPGFGIISHIISQEREKKKLLVV*E*FMLY*QLGY*DLLFE 587
GHP++ + ++ EK KLLVV FM L Y DLLFE
Sbjct: 236 GHPKLMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFE 285
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 90 AFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 149
Query: 181 AGIS 192
AGIS
Sbjct: 150 AGIS 153
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 118 bits (285), Expect = 1e-25
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +3
Query: 264 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 443
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 444 PEVYILILPGFGIISHIISQEREKK 518
PEVYILILPGFG++SHII+ +K+
Sbjct: 245 PEVYILILPGFGLVSHIIATFSKKR 269
Score = 62.9 bits (146), Expect = 8e-09
Identities = 32/63 (50%), Positives = 35/63 (55%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
+FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 97 SFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHL 156
Query: 181 AGI 189
GI
Sbjct: 157 VGI 159
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +2
Query: 488 SYYFTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQ 667
S+ KK F FIV AHH++T GID T+AYFT+AT++IA+
Sbjct: 259 SHIIATFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIP 318
Query: 668 QELK 679
+K
Sbjct: 319 TGIK 322
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 116 bits (278), Expect = 8e-25
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFG
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFG 345
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYI+ILP FG+ISHI++ +K
Sbjct: 346 HPEVYIVILPAFGVISHIVATFSKK 370
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H+
Sbjct: 199 AFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHV 258
Query: 181 AGIS 192
+G S
Sbjct: 259 SGAS 262
Score = 40.7 bits (91), Expect = 0.035
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
F+V AHH++TVG+ + +AYF AT++IAV +K
Sbjct: 390 FVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIK 424
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 116 bits (278), Expect = 8e-25
Identities = 53/85 (62%), Positives = 65/85 (76%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILI+PGFGIISH++S +K
Sbjct: 241 HPEVYILIIPGFGIISHVVSTYSKK 265
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 94 AFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Query: 181 AGIS 192
IS
Sbjct: 154 TSIS 157
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 488 SYYFTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQ 667
S+ + KK F F+V +HH++ VG+D DTRAYFTSAT+IIA+
Sbjct: 256 SHVVSTYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIP 315
Query: 668 QELK 679
+K
Sbjct: 316 TGIK 319
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 115 bits (276), Expect = 1e-24
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFG
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFG 240
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILI+PGFGI+SHI+S +K
Sbjct: 241 HPEVYILIIPGFGIVSHIVSTYSKK 265
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
+FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 94 SFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHL 153
Query: 181 AGIS 192
IS
Sbjct: 154 TSIS 157
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 488 SYYFTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQ 667
S+ + KK F F+V +HH++ VG+D DTRAYFTSAT+IIA+
Sbjct: 256 SHIVSTYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIP 315
Query: 668 QELK 679
+K
Sbjct: 316 TGIK 319
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 114 bits (275), Expect = 2e-24
Identities = 54/69 (78%), Positives = 57/69 (82%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
DQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FF
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 211
Query: 438 GHPEVYILI 464
GHPEVYILI
Sbjct: 212 GHPEVYILI 220
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 66 AFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 125
Query: 181 AGIS 192
AGIS
Sbjct: 126 AGIS 129
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 113 bits (271), Expect = 5e-24
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 441 HPEVYILILPGFGIISHIIS 500
HPEVYI+ILPGFGIIS I+S
Sbjct: 283 HPEVYIMILPGFGIISQIVS 302
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIF 168
AFPR+NNI F V NGAGTG TVY PLS++ G +VD+AI
Sbjct: 133 AFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAIL 191
Query: 169 SLHLAGIS 192
SLH+AG S
Sbjct: 192 SLHIAGAS 199
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
F+V AHH+FT G+ ++ + YFT+AT++IAV +K
Sbjct: 327 FVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIK 361
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 111 bits (267), Expect = 2e-23
Identities = 56/85 (65%), Positives = 61/85 (71%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFG
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFG 240
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILI+PGFGIIS IS K
Sbjct: 241 HPEVYILIIPGFGIISTTISANSNK 265
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +1
Query: 4 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 183
FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+
Sbjct: 95 FPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLS 154
Query: 184 GIS 192
GIS
Sbjct: 155 GIS 157
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
F+V +HH++TVG+D+DTRAYFT+AT+IIAV +K
Sbjct: 285 FVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIK 319
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 109 bits (263), Expect = 5e-23
Identities = 56/85 (65%), Positives = 62/85 (72%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFG
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFG 266
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILI+PGFGIIS +IS K
Sbjct: 267 HPEVYILIIPGFGIISTVISANSNK 291
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL
Sbjct: 120 AFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHL 179
Query: 181 AGIS 192
+GIS
Sbjct: 180 SGIS 183
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
FIV +HH++TVG+D+DTRAYFT+AT+IIA+ +K
Sbjct: 311 FIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVK 345
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 100 bits (239), Expect = 4e-20
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILI+P FG++S I+ +K
Sbjct: 258 HPEVYILIVPVFGVVSQIVQVYAKK 282
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 181 AGIS 192
+G+S
Sbjct: 171 SGLS 174
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAV 664
F V +HH+FTVG+D D+RAYF+ A++IIA+
Sbjct: 302 FCVWSHHMFTVGLDADSRAYFSGASLIIAI 331
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 100 bits (239), Expect = 4e-20
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILI+P FG++S I+ +K
Sbjct: 258 HPEVYILIVPVFGVVSQIVQVYAKK 282
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 181 AGIS 192
+G+S
Sbjct: 171 SGLS 174
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 99 bits (238), Expect = 5e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 330 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 494
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1
Query: 85 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 192
G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVS 251
Score = 33.1 bits (72), Expect = 7.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 578 IV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
+V HH+F VG D T +F+S T+II V +K
Sbjct: 376 VVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIK 409
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 99 bits (238), Expect = 5e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 339 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEREK 515
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIF 168
AFPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF
Sbjct: 122 AFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIF 181
Query: 169 SLHLAGIS 192
+LHL+G+S
Sbjct: 182 ALHLSGVS 189
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +2
Query: 590 HHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
HH++TVG+D+DTRAYFT+AT+IIAV +K
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIK 378
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 96.3 bits (229), Expect = 7e-19
Identities = 45/89 (50%), Positives = 59/89 (66%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FF
Sbjct: 189 DQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFF 248
Query: 438 GHPEVYILILPGFGIISHIISQEREKKKL 524
GHPEVY++ILP FGIIS + +K +L
Sbjct: 249 GHPEVYVIILPVFGIISEAVLFLTDKDRL 277
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 590 HHIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 688
HH++T G+DIDTR YF++AT+IIA+ +K +
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFN 332
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 104 AFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHT 162
Query: 181 AGI 189
GI
Sbjct: 163 VGI 165
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +3
Query: 330 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 509
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 510 EK 515
K
Sbjct: 266 AK 267
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
+ PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+
Sbjct: 95 SMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHM 154
Query: 181 AGIS 192
AG+S
Sbjct: 155 AGMS 158
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
F+V HH+F G+DIDTRAYFT+AT++IAV +K
Sbjct: 288 FLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVK 322
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +3
Query: 270 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 449
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 450 VYILILPGFGIISHII 497
VYI++LP FG+IS I+
Sbjct: 246 VYIILLPVFGLISTIV 261
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 4 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 183
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 184 GIS 192
GIS
Sbjct: 157 GIS 159
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 587 AHHIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 688
AHH+F VG+D+D+RAYF +I+I + +K +
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFN 324
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 93.1 bits (221), Expect = 6e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 333 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2
Query: 578 IV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYM 706
+V HH++T G+++DTRAYFTS TI+I++ K + YM
Sbjct: 291 LVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYM 333
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLH 177
A+PRIN+I E G GTG T+YPPLS+++ +VD+ IF L
Sbjct: 98 AYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLL 157
Query: 178 LAGIS 192
++G++
Sbjct: 158 VSGVA 162
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F G
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Query: 441 H 443
H
Sbjct: 159 H 159
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +1
Query: 4 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 183
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 184 GI 189
G+
Sbjct: 73 GV 74
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +3
Query: 363 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEREKKK 521
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ K++
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +2
Query: 509 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
GK+E F F+V AHH+FTVG+D+DTRAYFT+AT+IIAV +K
Sbjct: 240 GKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIK 296
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = -3
Query: 194 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 15
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 14 IRGN 3
IRGN
Sbjct: 138 IRGN 141
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -1
Query: 427 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 266
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 86.2 bits (204), Expect = 7e-16
Identities = 49/107 (45%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 362 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKGKK-ETFXXXX 538
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 539 XXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
+ + + +I++ YFTSAT+IIAV +K
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSN-SYWYSTYFTSATMIIAVPTGIK 112
Score = 83.0 bits (196), Expect = 7e-15
Identities = 40/79 (50%), Positives = 44/79 (55%)
Frame = +1
Query: 484 FLILFHKKGKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIHCXXXXXXXXXXXXXXXXXCC 663
F F K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 48 FSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAV 107
Query: 664 TTGIKIFR*LATIHGTQIN 720
TGIKIF LAT HGTQIN
Sbjct: 108 PTGIKIFSWLATFHGTQIN 126
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FF
Sbjct: 195 DRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFF 254
Query: 438 GHPEVYILILPGFGIISHIIS 500
GHPEVYI+ LP G++S I++
Sbjct: 255 GHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 84.2 bits (199), Expect = 3e-15
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = +3
Query: 282 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 461
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 462 ILPGFGIISHIISQEREKK 518
ILPGFGIIS ++S K+
Sbjct: 253 ILPGFGIISLLLSTYTTKE 271
Score = 40.7 bits (91), Expect = 0.035
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 4 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 183
+PR+N +E G+GTG T+YPPLS+++++ G +D IF L A
Sbjct: 102 YPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAA 159
Query: 184 GIS 192
GI+
Sbjct: 160 GIA 162
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +3
Query: 264 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 443
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 444 PEVYILILPGFGIISHII 497
PEVY++ILP FG+ S I
Sbjct: 225 PEVYVVILPVFGLFSSSI 242
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +2
Query: 578 IV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
+V AHH++T G+DIDTR+YFT+AT+IIAV +K
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIK 302
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 88 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 192
A G T YPPLSS SV+ ++FSLHLAGI+
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIA 142
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 RIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHL
Sbjct: 94 AFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHL 153
Query: 181 AGIS 192
AG+S
Sbjct: 154 AGLS 157
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
FIV A H++ VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIK 284
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/84 (46%), Positives = 51/84 (60%)
Frame = +3
Query: 264 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 443
+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ H
Sbjct: 192 MPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSH 251
Query: 444 PEVYILILPGFGIISHIISQEREK 515
P VYI+ILP FG+IS +I K
Sbjct: 252 PAVYIMILPFFGVISEVIPVHARK 275
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 428
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 181 AGIS 192
+GIS
Sbjct: 153 SGIS 156
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F FG
Sbjct: 199 RVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFG 258
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYILILPGFG+IS +I
Sbjct: 259 HPEVYILILPGFGMISEVI 277
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/64 (60%), Positives = 43/64 (67%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHL
Sbjct: 76 AFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHL 135
Query: 181 AGIS 192
AG+S
Sbjct: 136 AGVS 139
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +3
Query: 270 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 428
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/80 (50%), Positives = 49/80 (61%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
+++PLFV + AF A LL DR+ T FF P GGD +L+QHLF FF
Sbjct: 197 NRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFF 256
Query: 438 GHPEVYILILPGFGIISHII 497
GHPEVYILILP GIIS ++
Sbjct: 257 GHPEVYILILPTMGIISEVL 276
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 688
F+V AHH+F VG+ A+F +A+ +IAV +K +
Sbjct: 302 FLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFN 339
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/69 (53%), Positives = 47/69 (68%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 441 HPEVYILIL 467
I++L
Sbjct: 241 QTVATIIML 249
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 94 AFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Query: 181 AGIS 192
IS
Sbjct: 154 TSIS 157
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +3
Query: 330 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 497
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FF 437
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
Query: 438 GHPEVYILILPGFGIISHIISQEREK 515
HP VYI++LP FG++S +++ K
Sbjct: 265 SHPAVYIMVLPSFGVMSEVVATYSRK 290
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 82 AFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 141
Query: 181 AGIS 192
AGIS
Sbjct: 142 AGIS 145
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 389
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEREK 515
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + +
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 516 K 518
K
Sbjct: 319 K 319
Score = 32.7 bits (71), Expect = 9.4
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 174
AFPRIN I F ++ A T T+Y PLS ++ +VD+ + L
Sbjct: 148 AFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGL 205
Query: 175 HLAGIS 192
HL G+S
Sbjct: 206 HLTGVS 211
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHL 425
+LPL + + +TA A +LL DR+ T FF GGGDPIL+QHL
Sbjct: 213 RLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHL 272
Query: 426 F*FFGHPEVYILILPGFGIISHIIS 500
F FGHPEVYI+ILP +GI+ ++S
Sbjct: 273 FWIFGHPEVYIMILPAWGILGDVLS 297
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 177
AFPR+N F G AG G T Y PLS+N+ G L + ++
Sbjct: 125 AFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIF 184
Query: 178 LAGIS 192
+ G+S
Sbjct: 185 VTGVS 189
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
+ V AHH+FTVG+DID+R+YF+ AT II++ +K
Sbjct: 294 YFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVK 328
Score = 33.9 bits (74), Expect = 4.1
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSL 174
+ PR+N I F ++ +G T+YPPLS+ A G ++DL++ +
Sbjct: 103 SMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVV 162
Query: 175 HLAGIS 192
H+ GIS
Sbjct: 163 HVLGIS 168
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEREK 515
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 516 K 518
+
Sbjct: 426 R 426
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 441 HPEVYILILPGFGIISHI 494
HP VY+L+LP FGI S +
Sbjct: 266 HPAVYVLVLPVFGIFSEL 283
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 181 AGIS 192
+GIS
Sbjct: 153 SGIS 156
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 94 AFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHM 153
Query: 181 AGIS 192
IS
Sbjct: 154 TSIS 157
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 497
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYIL 343
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 5/68 (7%)
Frame = +3
Query: 330 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 494
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 495 ISQEREKK 518
I + ++
Sbjct: 268 IQRMARRR 275
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLF + + + +++ DR T+FF+P GG+ ++++HLF FG
Sbjct: 189 RLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFG 248
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYILILP FGI S +I
Sbjct: 249 HPEVYILILPAFGIFSEVI 267
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Frame = +3
Query: 345 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 494
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 495 ISQEREK 515
IS K
Sbjct: 298 ISTHARK 304
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++PLFV TA + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYILILP G++S ++
Sbjct: 238 HPEVYILILPAMGLVSELL 256
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/85 (41%), Positives = 47/85 (55%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HPEVYILILP GIIS +I K
Sbjct: 260 HPEVYILILPAMGIISEVIPVHARK 284
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
+++P+FV AV + +F A +L DR FF A GDPIL+QHLF FF
Sbjct: 202 NRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFF 260
Query: 438 GHPEVYILILPGFGIISHII 497
GHPEVYI+ +P G++S II
Sbjct: 261 GHPEVYIIFIPALGMVSSII 280
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 441 H--PEVYILIL 467
P + I+I+
Sbjct: 258 QIWPIIIIIII 268
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 181 AGIS 192
+G+S
Sbjct: 171 SGLS 174
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
+ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 185 ENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWW 244
Query: 438 GHPEVYILIL 467
HPEV I+ L
Sbjct: 245 NHPEVKIICL 254
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/64 (51%), Positives = 39/64 (60%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL
Sbjct: 99 AFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHL 158
Query: 181 AGIS 192
+G S
Sbjct: 159 SGFS 162
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+F + + + A +L DR L +DPA GG +L+QHLF FFG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
Query: 441 HPEVYILILPGFGIISHII 497
HPEVY+L LP FGI+S II
Sbjct: 265 HPEVYVLALPFFGIVSEII 283
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYS 258
Query: 441 HPEVYILILPGFGIISHII 497
HP VYI++LP +IS ++
Sbjct: 259 HPAVYIMVLPAMAVISEVV 277
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 67.7 bits (158), Expect = 3e-10
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPI 410
+LPL + A ITA A +L+ DR+L TSFF AG GG P+
Sbjct: 232 RLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPV 291
Query: 411 LYQHLF*FFGHPEVYILILPGFGIISHIISQEREK 515
L+QHLF F GHPEVYI+++P GI S +I+ K
Sbjct: 292 LFQHLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+F A+ I A A +L +R+ FF GGDP+L+QHLF FFG
Sbjct: 206 RMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFG 265
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYI+ LP G++S I+
Sbjct: 266 HPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 171
AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 9 AFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 275 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 442
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 330 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 509
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ +
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPRFS 264
Query: 510 EK 515
K
Sbjct: 265 RK 266
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
D+LP+ V + + A +L DRN T FFD A GG P+L+QHLF F
Sbjct: 215 DRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMF 274
Query: 438 GHPEVYILILPGFGIIS 488
HP VY+++LP GI+S
Sbjct: 275 AHPWVYVVVLPAMGIVS 291
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 66.1 bits (154), Expect = 8e-10
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 407
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 408 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
+L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 278 LLWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 181 AGIS 192
+G+S
Sbjct: 171 SGLS 174
Score = 63.7 bits (148), Expect = 4e-09
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYK 255
Query: 441 HPEVYILILPGFGI 482
+P V ILI GI
Sbjct: 256 NP-VLILIWLTSGI 268
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FF 437
++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF FF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 438 GHPEVYILILPGFGIISHIIS 500
GHPEVYIL+ P G ++ +IS
Sbjct: 247 GHPEVYILLFPALGAMADVIS 267
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLH 177
AFPR+N + + E+GA G T+Y PL++ I G +DLA ++
Sbjct: 101 AFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIF 160
Query: 178 LAGIS 192
L +S
Sbjct: 161 LFSLS 165
Score = 33.5 bits (73), Expect = 5.4
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQEL 676
F+V HH+F G +I TR +++ TI+I++ E+
Sbjct: 292 FVVWMHHMFITGTNIYTRLFYSITTILISIPFEM 325
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
Query: 441 HPEVYILILPGFGIISHIIS 500
HP VY+++LP GI++ + S
Sbjct: 250 HPTVYVMLLPYLGILAEVAS 269
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+F A+ + A A +L +R + FF GGDP+L+QHLF FFG
Sbjct: 265 RMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFG 324
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYI+ LP G++S I+
Sbjct: 325 HPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 482
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 483 ISHII 497
+SHI+
Sbjct: 302 VSHIL 306
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/86 (39%), Positives = 45/86 (52%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+F IT A+ +L DR FF GG P+L+ +LF +G
Sbjct: 220 RMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWG 279
Query: 441 HPEVYILILPGFGIISHIISQEREKK 518
HPEVYI+ILP FGI S IIS K+
Sbjct: 280 HPEVYIVILPAFGIFSEIISSFARKQ 305
Score = 33.1 bits (72), Expect = 7.1
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFP +NN+ F ++ G T Y PL+SN G + + L +
Sbjct: 133 AFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQI 192
Query: 181 AGI 189
AGI
Sbjct: 193 AGI 195
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +3
Query: 333 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVS 304
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 688
F+V HH FT+G + A+F AT+II++ +K +
Sbjct: 329 FMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFN 366
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+ + + TAF +L +R L FFD GGDP+L+QHLF FG
Sbjct: 222 KMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFG 281
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYI+ LP G+++ ++
Sbjct: 282 HPEVYIIFLPAAGMVATML 300
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 434
++L +FV A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F
Sbjct: 179 NKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWF 237
Query: 435 FGHPEVYILILPGFGIISHIIS 500
+ HP VY++ LP ++ I++
Sbjct: 238 YSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEREK 515
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II EK
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEIIPTFAEK 327
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 509 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
GKKE F F+V AHH+FTVG+D+DTRAYFTSAT+IIAV +K
Sbjct: 176 GKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIK 232
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 447 EVYILILPGFGIISHIISQEREKKK 521
EVYILILPGFG+ISHIISQE KK+
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 464 FTRIWYNFSYYFTRKGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 643
F I + +YY GKKE F FIV AHH+FTVG+D+DTRAYFTS
Sbjct: 16 FGMISHIVAYY---SGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTS 72
Query: 644 ATIIIAVQQELK 679
AT+IIA+ +K
Sbjct: 73 ATMIIAIPTGVK 84
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 432 FFGHPEVYILILPGFGIISHIISQEREKKK 521
FFGHPEVYILILPGFG+ISHI++ KK+
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 357 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 497
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+F +TA +L +R + FF A GGD +L+QHLF FG
Sbjct: 196 KMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFG 255
Query: 441 HPEVYILILPGFGIISHII 497
HPEVYI+ LP G IS I+
Sbjct: 256 HPEVYIIFLPAAGAISTIL 274
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +3
Query: 336 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTS 303
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 59.3 bits (137), Expect = 9e-08
Identities = 31/80 (38%), Positives = 42/80 (52%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
D++P++ +TA +L +R FF A GGD +L+QHLF F
Sbjct: 195 DRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLF 254
Query: 438 GHPEVYILILPGFGIISHII 497
GHPEVYI+ LP G IS I+
Sbjct: 255 GHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +3
Query: 348 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 437
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 438 GHPEVYILIL 467
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +1
Query: 73 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 192
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG S
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGAS 51
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/79 (39%), Positives = 39/79 (49%)
Frame = +3
Query: 264 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 443
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 444 PEVYILILPGFGIISHIIS 500
PEVYILILP FG+ S I S
Sbjct: 305 PEVYILILPAFGVYSEIFS 323
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 440
++P+F ++ T+ A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 441 HPEVYILILPGFGIISHIISQEREK 515
HP VY+++LP GI + + S K
Sbjct: 258 HPAVYVMLLPYLGIGAEVASTMARK 282
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = +3
Query: 261 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDP 407
+LP+ + + ITA + + DR T FF P+G GG P
Sbjct: 221 RLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQP 280
Query: 408 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 500
+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 281 LLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 264 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 443
LPLFV AV A G +LL ++ S++ GG +++++LF +FGH
Sbjct: 211 LPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGH 269
Query: 444 PEVYILILPGFGIISHIIS 500
PEVY+L+LPG G + +S
Sbjct: 270 PEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/64 (45%), Positives = 34/64 (53%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
A PR+ N+ F + G G VYPP SS +AH +VDL IF LHL
Sbjct: 83 AXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHL 142
Query: 181 AGIS 192
AGIS
Sbjct: 143 AGIS 146
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +2
Query: 575 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
+ V AHH+FTVG+D+DTR YF+SAT++IA+ +K
Sbjct: 42 YFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIK 76
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Frame = +3
Query: 264 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 410
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 411 LYQHLF*FFGHPEVYILILPGFGIIS 488
L+ HLF FFGHPEVYI+ P G+++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMA 277
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 49.6 bits (113), Expect = 8e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 419 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKGKK 517
+ ++IFW+S SLYFN IWYNF YY+T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 484 FLILFHKKGKKRNFWLFRNNLCYTSNWVIRIYCLS 588
F + K K W F NNLCY S W I +S
Sbjct: 24 FPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 278 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 430
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +1
Query: 115 PLSSNIAHRGRSVDLAIFSLHLAGIS 192
PL+S+IAH G SVD+AIFSLHLAG+S
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVS 97
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 362
D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 120 DRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 432 FFGHPEVYILILPGFGIISHI 494
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 587 AHHIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 688
AHH+ TVG++ DTRAYF++ TI+IA+ K +
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFN 35
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 596 IFTVGIDIDTRAYFTSATIIIAVQQELK 679
++ VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIK 28
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 40.7 bits (91), Expect = 0.035
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 123
AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 94 AFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 39.5 bits (88), Expect = 0.082
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 590 HHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
HH+FTVG+D++T +F+S T+II V +K
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIK 82
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +3
Query: 6 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 176
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 375 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 497
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 578 IV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 679
+V HH+F VG D+ T +F+S T+II V +K
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIK 59
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 596 IFTVGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYM 706
++T G+++DTRA+FTS TI+I++ K + YM
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYM 37
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 36.3 bits (80), Expect = 0.76
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 614 DIDTRAYFTSATIIIAVQQELK 679
D+DTRAYFTSAT+IIAV +K
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIK 22
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 667 TGIKIFR*LATIHGTQIN 720
TGIKIF LAT+HGTQIN
Sbjct: 19 TGIKIFSWLATLHGTQIN 36
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 35.5 bits (78), Expect = 1.3
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 180
AFPR+NN+ F + G + PL G SVDLAIF LHL
Sbjct: 77 AFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHL 134
Query: 181 AGIS 192
AG+S
Sbjct: 135 AGVS 138
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 402 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQ-EREKKKL 524
+P+L + LF FFGHP VY +LP + + I+ + EK KL
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKL 250
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 258 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 374
D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 163 DKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 444 PEVYILILPGFGIISHIISQEREKK 518
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = +1
Query: 1 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 132
AFPR+NNI F VE GAGTG TV LS I
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 396 GGDPILYQHLF*FFGHPEVYILILPGF 476
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 617 IDTRAYFTSATIIIAVQQELK 679
+DTRAYFTSAT+IIAV +K
Sbjct: 2 VDTRAYFTSATMIIAVPTGIK 22
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 667 TGIKIFR*LATIHGTQIN 720
TGIKIF LAT+HGTQIN
Sbjct: 20 TGIKIFSWLATLHGTQIN 37
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 7.1
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +2
Query: 290 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 469
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 470 RI 475
I
Sbjct: 154 SI 155
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 415 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 278
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,787,564
Number of Sequences: 1657284
Number of extensions: 9684521
Number of successful extensions: 20570
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 19543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20511
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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