Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1108X
(565 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 26 0.19
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 1.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.2
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 5.5
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 5.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 7.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 7.3
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 7.3
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 9.6
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 26.2 bits (55), Expect = 0.19
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 37 RCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSP 132
R R VVPP C P+T+ P P D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.0 bits (47), Expect = 1.8
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 294 WPPLHPAAPSRSLXNFPMVRSSPSETKDSVAQRLSSNPRSWVWKLAVST 440
+PPL P FP +PS +S AQ + N + WV + T
Sbjct: 174 YPPLPQVPPLPLPPIFPPTMINPSAICESAAQLIFMNVQ-WVRSIPAFT 221
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 83 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 98 HRAHLRGIRTPPRHPASGLSRSRP 169
H+A +R + PP+ RS P
Sbjct: 62 HKAPIRPVALPPKREIPSPKRSSP 85
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 5.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 449 YYSIMKCDVDIRKDLYANTVCPVVPPCTLES 541
YY I+ V+I L+ + V+ C LE+
Sbjct: 226 YYRILGDTVEIFNSLFGYQIILVIFDCCLET 256
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -3
Query: 104 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 6
HG V G+ ++ +H LD D G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 149 QTQDGVGECVSLVDGH 102
Q+ D +G C S+ D H
Sbjct: 652 QSDDNLGSCGSMGDAH 667
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 149 QTQDGVGECVSLVDGH 102
Q+ D +G C S+ D H
Sbjct: 544 QSDDNLGSCGSMGDAH 559
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -3
Query: 104 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 6
HG V G+ ++ +H LD D G
Sbjct: 600 HGYAFNVIGIGRSPDQNVKKINLKHALDLDRQG 632
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,538
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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