Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1108X
(565 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_56| Best HMM Match : Actin (HMM E-Value=0) 172 2e-43
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 172 2e-43
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 3e-43
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 3e-43
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 167 7e-42
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 139 1e-33
SB_54| Best HMM Match : Actin (HMM E-Value=0) 138 2e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 122 3e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 9e-26
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 102 2e-22
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 66 1e-11
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 61 5e-10
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 3e-08
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.28
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.28
SB_46368| Best HMM Match : DUF156 (HMM E-Value=6.5) 32 0.37
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 0.86
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 31 0.86
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 30 1.1
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 30 1.1
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.1
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 30 1.5
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.5
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 2.0
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 29 2.0
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 29 2.0
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_28474| Best HMM Match : GSH_synthase (HMM E-Value=3.20001e-40) 29 2.6
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35373| Best HMM Match : Phage_T7_Capsid (HMM E-Value=4.6) 29 3.5
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 3.5
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 3.5
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 28 4.6
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 4.6
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 4.6
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 4.6
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 4.6
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 28 4.6
SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43) 28 6.1
SB_56732| Best HMM Match : rve (HMM E-Value=0.0016) 28 6.1
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 6.1
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 6.1
SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25) 28 6.1
SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 28 6.1
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 6.1
SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23) 28 6.1
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 6.1
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 28 6.1
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 6.1
SB_39511| Best HMM Match : rve (HMM E-Value=0.0016) 28 6.1
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 6.1
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 28 6.1
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 27 8.0
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 27 8.0
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 27 8.0
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 27 8.0
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 27 8.0
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 27 8.0
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 173 bits (420), Expect = 1e-43
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189
Query: 183 MKILTERGYSFTTTAEREIVRDIKRSCA 266
MKILTERGYSFTTTAEREIVRDIK A
Sbjct: 190 MKILTERGYSFTTTAEREIVRDIKEKLA 217
Score = 140 bits (338), Expect = 9e-34
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKL YVALDFEQEMATAA PDGQVITIGNERFRCPEA+F PSFLGME+
Sbjct: 213 KEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 272
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTV 298
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGG+TM+PGIADRMQKEI
Sbjct: 299 LSGGSTMFPGIADRMQKEI 317
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 172 bits (418), Expect = 2e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 190 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 221
Score = 141 bits (342), Expect = 3e-34
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEM TAA PDGQVITIGNERFRCPEA+F PSFLGME+
Sbjct: 213 KEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 272
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTV 298
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGG+TMYPGIADRMQKEI
Sbjct: 299 LSGGSTMYPGIADRMQKEI 317
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 172 bits (418), Expect = 2e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 142 bits (343), Expect = 2e-34
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEM TAA PDGQVITIGNERFRCPEA+F PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTV 299
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGG+TMYPGIADRMQKEI
Sbjct: 300 LSGGSTMYPGIADRMQKEI 318
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 171 bits (416), Expect = 3e-43
Identities = 83/92 (90%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYL
Sbjct: 93 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYL 152
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 153 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 184
Score = 141 bits (342), Expect = 3e-34
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEM TAA PDGQVITIGNERFRCPEA+F PSFLGME+
Sbjct: 176 KEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 235
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 236 GIHETTYNSIMKCDVDIRKDLYANTV 261
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 262 LSGGTTMYPGIADRMQKEI 280
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 171 bits (416), Expect = 3e-43
Identities = 83/92 (90%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 141 bits (342), Expect = 3e-34
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEM TAA PDGQVITIGNERFRCPEA+F PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTV 299
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGG+TMYPGIADRMQKEI
Sbjct: 300 LSGGSTMYPGIADRMQKEI 318
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 167 bits (405), Expect = 7e-42
Identities = 80/92 (86%), Positives = 86/92 (93%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 9 PAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYL 68
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MK++TERGYSFTTTAEREIVRDIK + C +L
Sbjct: 69 MKLMTERGYSFTTTAEREIVRDIKEKLCYVAL 100
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 251 QEKLCYVALDFEQEM 295
+EKLCYVALDF QE+
Sbjct: 92 KEKLCYVALDFYQEI 106
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 139 bits (337), Expect = 1e-33
Identities = 67/86 (77%), Positives = 69/86 (80%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEM TAA PDGQVITIGNERFRCPEAL PSFLGME+
Sbjct: 187 KEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESS 246
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 247 GIHETTYNSIMKCDVDIRKDLYANTV 272
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/43 (90%), Positives = 41/43 (95%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 125
PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
MSGGTTMYPG+ADRMQKEI
Sbjct: 273 MSGGTTMYPGLADRMQKEI 291
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 138 bits (335), Expect = 2e-33
Identities = 60/86 (69%), Positives = 75/86 (87%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL
Sbjct: 2175 PCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYL 2234
Query: 183 MKILTERGYSFTTTAEREIVRDIKRS 260
+++TERGYSF +TAE++I+RD+K +
Sbjct: 2235 QRLVTERGYSFQSTAEQQIIRDLKET 2260
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+E LCY A+D+E+E+ A PDGQ I IG+ERFR E LF PS LG +
Sbjct: 2258 KETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDID 2317
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHE+I+ SI KCD+D+R +L+ N V
Sbjct: 2318 GIHESIFKSIKKCDIDLRAELFHNIV 2343
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 122 bits (293), Expect = 3e-28
Identities = 53/90 (58%), Positives = 75/90 (83%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL
Sbjct: 156 PALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYL 215
Query: 183 MKILTERGYSFTTTAEREIVRDIKRSCATS 272
+L + G+ F +++E EIVR IK S
Sbjct: 216 RLLLRKEGHCFHSSSELEIVRTIKEESMES 245
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 434 IHETIYYSIMKCDVDIRKDLYANTV 508
I E + ++I K D+D+R+ LY+N V
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIV 281
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 113 bits (272), Expect = 9e-26
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = +3
Query: 9 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 188
+Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K
Sbjct: 136 VYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIK 195
Query: 189 ILTERGYSFTTTAEREIVRDIK 254
++ RGY+F TA+ E VR +K
Sbjct: 196 LMLLRGYAFNHTADFETVRMMK 217
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/86 (37%), Positives = 46/86 (53%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYV + EQE A PDG+V+ + ERF PEALF P + +E
Sbjct: 217 KEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGV 276
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
G+ E ++ +I D+D R + Y + V
Sbjct: 277 GVAELLFNTIQAADIDTRSEFYKHIV 302
Score = 32.3 bits (70), Expect = 0.28
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGG+TMYPG+ R+++EI
Sbjct: 303 LSGGSTMYPGLPSRLEREI 321
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 102 bits (245), Expect = 2e-22
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = +2
Query: 341 PDGQVITIGNERFRCPEALF*PSFLGMEACGIHETIYYSIMKCDVDIRKDLYANTV 508
PDGQVI+IGNERFRCPEA+F P+FLGMEA GIHE IY IMKCDVDIRKDLY+N V
Sbjct: 17 PDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCV 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGG+TM+PGIADRMQKEI
Sbjct: 73 LSGGSTMFPGIADRMQKEI 91
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 200
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 201 RGYSFTTTAEREIVRDIK 254
RG++FT+++ +IV DIK
Sbjct: 827 RGHNFTSSSGWQIVNDIK 844
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFL 415
+EK+CY++ D +E+ PDGQ+I+IG E E LF P L
Sbjct: 844 KEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 61.3 bits (142), Expect = 5e-10
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = +3
Query: 18 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 173
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 174 DYLMKILTERGYSFTTTAEREIVRDIK 254
++ ++L ER E + IK
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIK 126
Score = 34.3 bits (75), Expect = 0.070
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 356 ITIGNERFRCPEALF*PSFLGME-ACGIHETIYYSIMKCDVDIRKDLYANTV 508
+ + ERF PE F P F + + E + I C +D+R+ LY N V
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIV 247
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 183 MKILTE 200
++ E
Sbjct: 123 RQMFEE 128
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.053
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSC 72
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 4 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 141
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +1
Query: 7 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 132
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 7 PCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 105
PCT PC+ CT P +TP+T TPC
Sbjct: 632 PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 7 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 105
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.28
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 60 TGIVLDSGDGVSHTVPI 110
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_46368| Best HMM Match : DUF156 (HMM E-Value=6.5)
Length = 203
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 358 HHRKRKIPLPRGSLLTLVLGYGSLRYPRDN 447
HHRKR LPR ++ + G GS PRDN
Sbjct: 58 HHRKRSRSLPRTNVFGTLNGLGSPPPPRDN 87
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.9 bits (69), Expect = 0.37
Identities = 28/82 (34%), Positives = 36/82 (43%)
Frame = +2
Query: 14 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDP 193
RR S A R RS R R+ RRR R R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 194 HRARLLVHYHRRAGNRA*HQEK 259
R+R H R+ + + ++K
Sbjct: 270 SRSRSPTHRRHRSRSHSPEKKK 291
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 141
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P T+P++ T P + TP +PTP T T +PT S
Sbjct: 44 PTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 16 SPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TRDTHSPT 135
+P+KP P P + TP +P TP P+ T H+PT
Sbjct: 101 TPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 99
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 135
P T K + T + P TP PTP T T +PT
Sbjct: 76 PTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 1 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHS 129
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SETK SV +R + + W+W+ TR+Y+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWRYFTHHETRRYL 130
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 0.86
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 160 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 23
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 160 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 23
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 160 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 23
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 136 AWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 23
+W S P T W +PSP+ T P ++T+W
Sbjct: 77 SWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYITP 458
S+ SE K SV +R + ++W+W+ TR+Y+ P
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRYVLP 262
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 105
P T PS P C + P C+T T+SP PC
Sbjct: 671 PATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 105
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 19 PSKPCSRCTRPVVPP 63
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 50 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHE 187
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 105
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 111
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SETK SV +R + + W+W+ TR+Y+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWRYFTHHETRRYL 491
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SETK SV +R + + W+W+ TR+Y+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWRYFTHHETRRYL 127
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWRWFTHRETRRYI 227
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 117
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 557 FCIRSAIPGYMVVPPDIRCWRTSP 486
FC PG + +P D CW+ P
Sbjct: 32 FCCTVERPGLLTIPDDYTCWKVGP 55
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 40 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1761
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 237 IVRDIKRSCATSLLTSSRRWPP--LHPAAPSRSLXNFPMVRSS 359
+ D K T TS+ PP LHP AP+ +PM R++
Sbjct: 1705 VTADTKAITTTITATSTNTLPPINLHPNAPTHPATTYPMDRAA 1747
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 176 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 210
>SB_28474| Best HMM Match : GSH_synthase (HMM E-Value=3.20001e-40)
Length = 372
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 358 HHRKRKIPLPRGSLLTLVLGYGSLRYPRDNILLHHEV 468
H RK +IPL R S L+ +L G LR + IL HEV
Sbjct: 255 HQRKPRIPLFRRS-LSAILKNGELREDKKLILEGHEV 290
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSP--TPS 141
++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 10 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTP 138
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 16 SPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 141
+PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 32 TPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
>SB_35373| Best HMM Match : Phage_T7_Capsid (HMM E-Value=4.6)
Length = 414
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 458 IMKCDVDIRKDLYANTVCPVVPPCTLESP 544
++ C+ D L TVCP V PC E P
Sbjct: 243 VLSCNTDHVASLLMETVCPDVVPCVGEWP 271
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 13 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 150
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 19 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PV 162
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 16 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ +ETK SV +R + + W+W+ TR+Y+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWRYFTHHETRRYL 134
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 153
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 1 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 95 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 196
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 43 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 147
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 198 ERGYSFTTTAEREIVRDIKRSCATSLLTSSRRWPPLHPAAPSRSLXNFPMVRSSPSETKD 377
ERG + EI+ + +R + R + P+ PS + VRSSPS +
Sbjct: 29 ERGPDWKVKTLDEILSEKRRKLEGGEESPPPRESLISPSTPSEVIYQMSPVRSSPSLSTG 88
Query: 378 SVAQRLS 398
S+ R S
Sbjct: 89 SITPRKS 95
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 28.3 bits (60), Expect = 4.6
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Frame = +3
Query: 18 AIQAVLSLYASGRTTGIVLD--------SGDGVSHT-VP-IYEGYALPHAILRLDLAGRD 167
AIQ V A RTTGI LD S +HT P +Y G A H GR
Sbjct: 209 AIQIVYDHQAKERTTGIELDGRRIRVDYSVTKRAHTPTPGVYMGKASQHRDSGRRGGGRR 268
Query: 168 LTDYLMKILTERGYSFTTTAEREIVR-DIKRSCATSLLTSSRRWPPLHPAAPSRSLXNFP 344
DY R Y + +R+ R D R ++ + SR + P A +
Sbjct: 269 YDDY----DDRRDYDYRGGRDRDYYRDDYYRGSSSYYRSRSRSYSPRREKAKQNTFKKIC 324
Query: 345 MVRSSPSETKDSVAQR 392
+S E ++SV++R
Sbjct: 325 RRSASYLEERNSVSRR 340
>SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)
Length = 1803
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 628 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 662
>SB_56732| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 236
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 54 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 88
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 232 STRSELKASVVERFNRTLKTWMWRWFTHRETRRYI 266
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 1475 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 1509
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 485 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 519
>SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 346
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 285 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 319
>SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 182 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 216
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 430 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 464
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 RPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 30 RPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 4 PPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 140 PATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
>SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23)
Length = 346
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 206 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 240
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 102
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+Y+
Sbjct: 59 STQSELKASVVERFNRTLKTWMWRWFTHKETRRYV 93
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 25 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_39511| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 850
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 54 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 88
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWK 425
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +2
Query: 14 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPH 184
R P L V R+ + GL +R PH T P HP R+ P PH
Sbjct: 342 RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGLSKSTAPDHPHGVSKRTAPDH-PH 397
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Frame = -3
Query: 227 GGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS--LVDGHGVGDTVAGVQHDTGG- 57
G G + + + +D V + A G V GVG+ + D GVGD G D GG
Sbjct: 37 GVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADGRVSDDGGVGDDADGRVSDDGGV 94
Query: 56 ---TTGRVQREHGLDGDVHG 6
GRV + G+ D G
Sbjct: 95 GDNAEGRVSDDGGVGDDAIG 114
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+YI
Sbjct: 238 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYI 272
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 19 PSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
P+K RP V P+S + A ++PT T + P P
Sbjct: 317 PAKSSIDVARPPVVPISSHSAAPIAPTTTTKTTKSGLPEP 356
>SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+Y+
Sbjct: 91 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYV 125
>SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 SSPSETKDSVAQRLSSNPRSWVWKLAV--STRQYI 452
S+ SE K SV +R + ++W+W+ TR+Y+
Sbjct: 171 STRSELKASVVERFNRTLKTWMWRWFTHKETRRYV 205
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 346 WSGHHHRKRKIPLPRGSLLTLV 411
WSGH KRK L R L+T +
Sbjct: 1128 WSGHESNKRKATLERQELVTKI 1149
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTRDTHSPT 135
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 153
P TS + S P +TP T S TP PS T S TP+ +T
Sbjct: 58 PTTSYTPTTSYTPTTSYTPTPSYTPTT-SYTPTPSYTSTTSYTPTTSYT 105
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 25 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
+PC T P PP + W+P + P P D PTP
Sbjct: 235 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 268
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 25 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
+PC T P PP + W+P + P P D PTP
Sbjct: 169 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 202
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 92 LPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPH 196
LPH + G + P H + L+ + PHR+ H+ P+
Sbjct: 214 LPHADN--GPKATPPHGHTALTVTSPHRMDHKTPY 246
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 153
P +P+ P S+ T PP+ TP + TP P+ + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,124,329
Number of Sequences: 59808
Number of extensions: 515661
Number of successful extensions: 2437
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2405
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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