Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1108X
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 173 1e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 173 1e-43
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 172 1e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 172 1e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 172 1e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 172 1e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 172 1e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 172 1e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 172 1e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 172 1e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 164 3e-41
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 118 2e-27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 112 2e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 73 1e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 61 6e-10
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 50 9e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 2e-04
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 35 0.035
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 35 0.035
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 35 0.035
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 33 0.11
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.57
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 31 0.57
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 0.76
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.0
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.0
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 30 1.0
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 30 1.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 30 1.3
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 29 1.7
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 2.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 2.3
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 2.3
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 2.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 2.3
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 2.3
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.1
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 4.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z68010-2|CAA92010.2| 433|Caenorhabditis elegans Hypothetical pr... 28 5.3
U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical pr... 28 5.3
AB236333-1|BAE45265.1| 433|Caenorhabditis elegans MBlk-1 Relate... 28 5.3
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 27 7.0
U58728-2|AAB00589.2| 240|Caenorhabditis elegans Hypothetical pr... 27 7.0
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 27 7.0
Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81536-5|CAB04366.1| 297|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 27 9.3
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 27 9.3
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 27 9.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 143 bits (346), Expect = 9e-35
Identities = 67/86 (77%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEALF PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 143 bits (346), Expect = 9e-35
Identities = 67/86 (77%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEALF PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 142 bits (344), Expect = 2e-34
Identities = 66/86 (76%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEA+F PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 142 bits (344), Expect = 2e-34
Identities = 66/86 (76%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEA+F PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 143 bits (346), Expect = 9e-35
Identities = 67/86 (77%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEALF PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 142 bits (344), Expect = 2e-34
Identities = 66/86 (76%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEA+F PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 142 bits (344), Expect = 2e-34
Identities = 66/86 (76%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEA+F PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 146
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 147 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 178
Score = 143 bits (346), Expect = 9e-35
Identities = 67/86 (77%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEALF PSFLGME+
Sbjct: 170 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 229
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 230 GIHETSYNSIMKCDIDIRKDLYANTV 255
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 256 LSGGTTMYPGIADRMQKEI 274
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 176
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 177 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 208
Score = 143 bits (346), Expect = 9e-35
Identities = 67/86 (77%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEALF PSFLGME+
Sbjct: 200 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 259
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 260 GIHETSYNSIMKCDIDIRKDLYANTV 285
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 286 LSGGTTMYPGIADRMQKEI 304
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 172 bits (419), Expect = 1e-43
Identities = 84/92 (91%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYSFTTTAEREIVRDIK-RSCATSL 275
MKILTERGYSFTTTAEREIVRDIK + C +L
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 143 bits (346), Expect = 9e-35
Identities = 67/86 (77%), Positives = 71/86 (82%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVALDFEQEMATAA PDGQVIT+GNERFRCPEALF PSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPGIADRMQKEI
Sbjct: 300 LSGGTTMYPGIADRMQKEI 318
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 164 bits (399), Expect = 3e-41
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYM 189
Query: 183 MKILTERGYSFTTTAEREIVRDIK 254
MKILTERGY+FTTTAEREIVRDIK
Sbjct: 190 MKILTERGYTFTTTAEREIVRDIK 213
Score = 132 bits (320), Expect = 1e-31
Identities = 62/86 (72%), Positives = 66/86 (76%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCYVA DFE E+A AA PDGQVITIGNERFRCPE LF P+F+GME
Sbjct: 213 KEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGA 272
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 273 GIHETTYQSIMKCDVDIRKDLYANTV 298
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGT+M+PGIADRMQKEI
Sbjct: 299 LSGGTSMFPGIADRMQKEI 317
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 118 bits (285), Expect = 2e-27
Identities = 53/86 (61%), Positives = 70/86 (81%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL
Sbjct: 134 PALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYL 193
Query: 183 MKILTERGYSFTTTAEREIVRDIKRS 260
+L GY F + E EIVR++K +
Sbjct: 194 RVLLRREGYEFHRSNEFEIVREMKEN 219
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/86 (40%), Positives = 43/86 (50%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+E CY+ALD T PD I I N FR PE LF P +G E
Sbjct: 217 KENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWP 271
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
G+ + SIMKCDVD+R+ LY+N V
Sbjct: 272 GMAHVVNQSIMKCDVDLRQTLYSNIV 297
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 112 bits (269), Expect = 2e-25
Identities = 49/83 (59%), Positives = 67/83 (80%)
Frame = +3
Query: 6 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 185
++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+
Sbjct: 135 SIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLI 194
Query: 186 KILTERGYSFTTTAEREIVRDIK 254
K+L +RGY+F +A+ E VR +K
Sbjct: 195 KLLLQRGYNFNHSADFETVRQMK 217
Score = 73.7 bits (173), Expect = 8e-14
Identities = 35/86 (40%), Positives = 46/86 (53%)
Frame = +2
Query: 251 QEKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEAC 430
+EKLCY+A D EQE A PDG+VI +G ERF PE LF P + +E
Sbjct: 217 KEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKA 276
Query: 431 GIHETIYYSIMKCDVDIRKDLYANTV 508
G+ E ++ I D+D R D Y + V
Sbjct: 277 GLSELLFGCIQASDIDTRLDFYKHIV 302
Score = 34.3 bits (75), Expect = 0.061
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 508 MSGGTTMYPGIADRMQKEI 564
+SGGTTMYPG+ R++KE+
Sbjct: 303 LSGGTTMYPGLPSRLEKEL 321
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 158
P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I + +A
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIA 203
Query: 159 GRDLTDYLMKILTERGYSFTTTAEREIVRDIK 254
GRD+T ++ +L +R ++ E+ + IK
Sbjct: 204 GRDITYFIQSLLRDREHTIPAEQSYEVAKMIK 235
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 356 ITIGNERFRCPEALF*PSFLGME-ACGIHETIYYSIMKCDVDIRKDLYANTV 508
+ +G ERF PE F P F E I +TI I +C +D+R+ LY N V
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIV 327
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 60.9 bits (141), Expect = 6e-10
Identities = 25/67 (37%), Positives = 46/67 (68%)
Frame = +3
Query: 3 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 182
PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 153 PAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQL 212
Query: 183 MKILTER 203
++L ++
Sbjct: 213 AQMLDQQ 219
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = +2
Query: 341 PDGQVITIGNERFRCPEALF*PSFLGMEA-----CGIHETIYYSIMKCDVDIRKDLYAN 502
P+G G ER + PE LF +L E + + S D+DIR L++N
Sbjct: 296 PNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSN 354
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.4 bits (115), Expect = 9e-07
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 254 EKLCYVALDFEQEMATAAXXXXXXXXXXXPDGQVIT---IGNERFRCPEALF*PSFLGME 424
E+ YV D+++E + P + T I N RF C E LF P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 425 ACGIHETIYYSIMKCDVDIRKDLYAN 502
G+H+ I+ +I++C +D R+ LY N
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRTLYRN 474
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +3
Query: 24 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 203
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368
Query: 204 G---YSFTTTAEREIVR 245
Y+F + E+ I+R
Sbjct: 369 NKGLYAFQSPVEKLILR 385
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 490 LVRQHRMSGGTTMYPGIADRMQKEI 564
L R ++GG ++ PGIA+++++E+
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQEL 495
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 356 ITIGNERFRCPEALF*PSFLGMEACGIHETIYYSIMKCDVDIRKDLYANTV 508
I +G ERF PE LF PS + ++ CG+ E + SI +C +R L N +
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENII 313
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +3
Query: 66 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 245
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 246 DIK 254
+ K
Sbjct: 204 ECK 206
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 356 ITIGNERFRCPEALF*PSFLGMEACGIHETIYYSIMKCDVDIRKDLYANTV 508
I +G ERF PE LF PS + ++ CG+ E + SI +C +R L N +
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENII 313
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +3
Query: 66 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 245
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 246 DIK 254
+ K
Sbjct: 204 ECK 206
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT 123
T+P P S T P VPPV+ TP T + T +T T
Sbjct: 664 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT 123
T+P P S T P VPPV+ TP T + T +T T
Sbjct: 720 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 756
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT 123
T+P P S T P VPPV+ TP T + T +T T
Sbjct: 543 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 132
TSP P + P +PP + T T + PCP T++P
Sbjct: 122 TSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWT--PATVSPTPCPSTRDTHSPTPSC 144
P P+ P P VPP T P TVS P PS PT SC
Sbjct: 355 PSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 1 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 147
RPP P KP + P PP P +P P P+ + +P P+ V
Sbjct: 181 RPPPQEPPKPVEQAAPPP-PPAPMPVPVEKAPEPVPAPVEQIAPPPAPV 228
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 159
P T+ + P + T P + T T +PT +T T + TP+ T P
Sbjct: 125 PTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 153
T+ + P + T P + TP T + TP +T T +PT T
Sbjct: 73 TTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P T+ + P + T P + TP T + TP +T +T + TP+
Sbjct: 217 PTTTTTTPTTTTTTTTTPTTTTTTPTTTT-TPATTTSETTTTTPT 260
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 7 PCTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
PC + PC+ C +P P +C T V TP P T T P+C
Sbjct: 182 PCPQQAACPCTTCNQPPPPCNTCNTQPVVIVTPAPCT--TCYQPPAC 226
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 0.76
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 91 TPSPESSTIPVVRPDAYSESTAWMATYMA 5
TP P SST+PVV P ++ T +Y+A
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLA 893
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +1
Query: 4 PPCTSPS-----KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 135
PP TS S KP + T P P S T T +P P ST + S T
Sbjct: 584 PPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTT 632
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +1
Query: 4 PPCTSPS-----KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 135
PP TS S KP + T P P S T T +P P ST + S T
Sbjct: 584 PPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTT 632
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 385 PRGSLLTLVLGYGSLRYPRDNILLHHEVRRGHP 483
P+G+L LV G G ++ +D +L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 385 PRGSLLTLVLGYGSLRYPRDNILLHHEVRRGHP 483
P+G+L LV G G ++ +D +L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC--PSTRDTHSPTPSC 144
P P P S C P P C P PC P T SP C
Sbjct: 88 PLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCC 135
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 7 PCTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
PC PS P C P P C P PTP P +P P
Sbjct: 98 PCCGPSPVPAPCCPPPPAPAAPCCPPPP-PPTPSPLVCCKQAPVP 141
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 49 PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
P++PP PA V T P+TR+T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 288 RRWPPLHPAAPSRSLXNFPMVRSSPSE 368
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 10 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
C +P PC T P PP+ C + P P P P+C
Sbjct: 645 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP----VCLPPPTC 685
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 10 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
C +P PC T P PP+ C + P P P P+C
Sbjct: 290 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP----VCLPPPTC 330
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 10 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
C +P PC T P PP+ C + P P P P+C
Sbjct: 242 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP----VCLPPPTC 282
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 10 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
C +P PC T P PP+ C + P P P P+C
Sbjct: 970 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP----VCLPPPTC 1010
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RKRKIPLPRGSLLTLVLGYGSLRYPRDNILLHHEVRRG 477
RKR+ LPRG++ T G R+P +I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RKRKIPLPRGSLLTLVLGYGSLRYPRDNILLHHEVRRG 477
RKR+ LPRG++ T G R+P +I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RKRKIPLPRGSLLTLVLGYGSLRYPRDNILLHHEVRRG 477
RKR+ LPRG++ T G R+P +I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RKRKIPLPRGSLLTLVLGYGSLRYPRDNILLHHEVRRG 477
RKR+ LPRG++ T G R+P +I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 153
PC + + + T +VP S T T + TP P T T PT + T
Sbjct: 444 PCPTTTSTTTSATT-LVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTT 491
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 138
P C P PC P+ PP C P P P P P P
Sbjct: 36 PMCAPPPLPCP--PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 PPCTSPSKP-CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 144
PPC P P C+ P PP C P P P P P C
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPIC-PPQFCPPPPMCPPPPPPPPPPMC 74
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTR 117
PP SPS P R RP PA + TP P R
Sbjct: 510 PPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAPRGR 547
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RKRKIPLPRGSLLTLVLGYGSLRYPRDNILLHHEVRRG 477
RKR+ LPRG++ T G R+P +I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PV 162
PPC P C+ P PP P P P P+ P C+ P+
Sbjct: 27 PPCPEPMPVCAT---PPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPM 76
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 125 CVSLVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 3
C + GH G G H GG G HG G HGG
Sbjct: 169 CEAHGGGHHGGGGGGGSHHHGGGGGGGGHHHHGGGGHYHGG 209
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVP-PVSCWTPATVSPTPCPSTRDTHS-PT 135
T+ KP + T P P + P T + TP P+T T S PT
Sbjct: 426 TTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPT 468
>U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical
protein B0353.1 protein.
Length = 182
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 297 PPLHPAAPSRSLXNFPMVRSSPSETKDSVAQRL--SSNPRSWVWKLAVSTRQYITPS*SA 470
PPL P+ + PM+ SPS K + Q+ +S P ++ + S++ I+P+ +
Sbjct: 6 PPLKPSRSFLPQDSGPMLHRSPSGAKRKIRQKREEASRPSPFLSPSSSSSQTSISPTPTE 65
Query: 471 TWTSVRT 491
T ++ R+
Sbjct: 66 TSSNYRS 72
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 43 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
T PP S TP + T P T T SP+ S
Sbjct: 221 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 43 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 43 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
T PP S TP + T P T T +P+ S
Sbjct: 83 TTSTEPPSSSTTPVQTTTTTAPETTSTEAPSSS 115
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P P PC + +P PP C P P P P + T PS
Sbjct: 103 PPPGPPPPCQQYQQPQPPP--CQRPQPPQPQPQPYPQRTGGCLPS 145
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P P PC + +P PP C P P P P + T PS
Sbjct: 103 PPPGPPPPCQQYQQPQPPP--CQRPQPPQPQPQPYPQRTGGCLPS 145
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 7 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 141
P P PC + +P PP C P P P P + T PS
Sbjct: 103 PPPGPPPPCQQYQQPQPPP--CQRPQPPQPQPQPYPQRTGGCLPS 145
>Z68010-2|CAA92010.2| 433|Caenorhabditis elegans Hypothetical
protein T01C1.2 protein.
Length = 433
Score = 27.9 bits (59), Expect = 5.3
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Frame = +3
Query: 120 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKRSCATSLL------- 278
Y +P + LR + + + + RG AE E R ++ + A +LL
Sbjct: 180 YGIPRSTLRNKIYKLE-AEGAIPSKVRRGKIAARRAEAEQKRCVEATAAAALLDAFGNQS 238
Query: 279 --TSSRRWPPLHPAAPSRSLXNFPMVRSSPSETKDSVAQRLSSNPRSWVWKLAVSTRQYI 452
+SS + P++P + + +P + L +W+ T+ +
Sbjct: 239 DSSSSSPHASMCPSSPDSTNSSLEGTGETPEMSDKKSCSPLDPKWLESIWQNLFKTQGNV 298
Query: 453 TPS*SATWTSVRTCTPTP 506
P SA ++V T TPTP
Sbjct: 299 VPVDSANISNVDTHTPTP 316
>U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical
protein C54D2.6 protein.
Length = 224
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 533 GYMVVPPDIRCWRTSPYGC 477
G ++PPD++C + S +GC
Sbjct: 113 GRTIIPPDLKCVKKSLFGC 131
>AB236333-1|BAE45265.1| 433|Caenorhabditis elegans MBlk-1 Related
factor-1 protein.
Length = 433
Score = 27.9 bits (59), Expect = 5.3
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Frame = +3
Query: 120 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKRSCATSLL------- 278
Y +P + LR + + + + RG AE E R ++ + A +LL
Sbjct: 180 YGIPRSTLRNKIYKLE-AEGAIPSKVRRGKIAARRAEAEQKRCVEATAAAALLDAFGNQS 238
Query: 279 --TSSRRWPPLHPAAPSRSLXNFPMVRSSPSETKDSVAQRLSSNPRSWVWKLAVSTRQYI 452
+SS + P++P + + +P + L +W+ T+ +
Sbjct: 239 DSSSSSPHASMCPSSPDSTNSSLEGTGETPEMSDKKSCSPLDPKWLESIWQNLFKTQGNV 298
Query: 453 TPS*SATWTSVRTCTPTP 506
P SA ++V T TPTP
Sbjct: 299 VPVDSANISNVDTHTPTP 316
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 13 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 159
T+ S P + PVS T T + T P+T T P P + T P
Sbjct: 32 TTISAPTTTVPITTTNPVSTTTTTTTTTTEAPTTTTTVVPIPCNICTSP 80
>U58728-2|AAB00589.2| 240|Caenorhabditis elegans Hypothetical
protein C54H2.4 protein.
Length = 240
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 320 GSCWMQRWPSPARSQERRSTASLDVTHDFPLGGGSERVAAL 198
G W QR PS R + D T D P G S + L
Sbjct: 140 GGNWNQRPPSRQRVSRKLGALEKDETEDIPTAGYSGHIQGL 180
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSP 132
PP T P ++ T P V P S TP T +PTP P SP
Sbjct: 211 PPLTPLPSPGAQSTAPPVFPTSTPTP-TSTPTPLLPGNLRADSP 253
>Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical
protein C18D11.9 protein.
Length = 111
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 471 TWTSVRTCTPTPYVR---WYHHVPWNRRPYAKG 560
TWT V + TP++R W ++ W RPY G
Sbjct: 40 TWTKVGA-SQTPHIRTRRWGYYGGWGYRPYGWG 71
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 16 SPSKPCSRCTRPVVPPVSCWTPATVS--PTPCPSTRDTHSPTPSCVWT*P 159
S KP + T P + TP T + PT +T T + TP+ T P
Sbjct: 81 SKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 130
>Z81536-5|CAB04366.1| 297|Caenorhabditis elegans Hypothetical
protein F40D4.6 protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 361 HRKRKIPLPRGSLLTLVLGYGSLRY 435
+R + +P ++LTL+LGYG Y
Sbjct: 121 YRNYRPMIPTNAILTLILGYGVFEY 145
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 336 NFPMVRSSPSETKDSVAQRLSSNPRSWVWKLAVSTRQYITPS*SATWTSVRTCTPTPYVR 515
N+ ++ SP+ T SV L W+ VS + +T AT VR + +
Sbjct: 675 NYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIVTLIVFATQAYVRKRKGSISAQ 734
Query: 516 WYHHVPWNR 542
+H VP +R
Sbjct: 735 SHHSVPVHR 743
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 336 NFPMVRSSPSETKDSVAQRLSSNPRSWVWKLAVSTRQYITPS*SATWTSVRTCTPTPYVR 515
N+ ++ SP+ T SV L W+ VS + +T AT VR + +
Sbjct: 637 NYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIVTLIVFATQAYVRKRKGSISAQ 696
Query: 516 WYHHVPWNR 542
+H VP +R
Sbjct: 697 SHHSVPVHR 705
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 16 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 111
SP+ P S T+ P S + A SPTP PS
Sbjct: 504 SPAPPVSTTTK-AAPTTSTTSAAPYSPTPLPS 534
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 4 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP--STRDTHSPTPS 141
PP + SK + PV PP ++P+ + P P P + + +P P+
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLPT 1407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,727,883
Number of Sequences: 27780
Number of extensions: 335992
Number of successful extensions: 1888
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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