BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1108X (565 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 123 1e-30 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.6 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 3.7 EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 21 6.5 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 6.5 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.5 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.6 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.6 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.6 AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 8.6 >AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. Length = 133 Score = 123 bits (296), Expect = 1e-30 Identities = 59/73 (80%), Positives = 59/73 (80%) Frame = +2 Query: 290 EMATAAXXXXXXXXXXXPDGQVITIGNERFRCPEALF*PSFLGMEACGIHETIYYSIMKC 469 EMATAA PDGQVITIGNERFRCPEALF PSFLGMEACGIHET Y SIMKC Sbjct: 1 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60 Query: 470 DVDIRKDLYANTV 508 DVDIRKDLYANTV Sbjct: 61 DVDIRKDLYANTV 73 Score = 42.7 bits (96), Expect = 2e-06 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = +1 Query: 508 MSGGTTMYPGIADRMQKEI 564 +SGGTTMYPGIADRMQKEI Sbjct: 74 LSGGTTMYPGIADRMQKEI 92 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 23.4 bits (48), Expect = 1.6 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 445 NILLHHEVRRGHP*GLVRQHRMSGGTTMYPG 537 N L+ +V+ GH V+QHR S +T G Sbjct: 264 NRQLNSDVQPGHGSPPVKQHRSSSASTTCSG 294 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 22.2 bits (45), Expect = 3.7 Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 1/34 (2%) Frame = +2 Query: 125 TP-PRHPASGLSRSRPHRLPHEDPHRARLLVHYH 223 TP P H G S H PH A H H Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444 >EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate carboxykinase protein. Length = 118 Score = 21.4 bits (43), Expect = 6.5 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -3 Query: 98 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 6 VGD +A ++ D G + E+G G G Sbjct: 42 VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 21.4 bits (43), Expect = 6.5 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = -1 Query: 301 GGHLLLEVKSDVAQLLLMSRTI 236 GG ++ + S + LLL+ RT+ Sbjct: 8 GGGMVSAILSSIVLLLLLGRTV 29 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.4 bits (43), Expect = 6.5 Identities = 12/44 (27%), Positives = 20/44 (45%) Frame = +2 Query: 38 AVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRP 169 ++ +++HR C P +L I + P HP + S S P Sbjct: 62 SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 21.0 bits (42), Expect = 8.6 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -3 Query: 329 TSRGSCWMQRWPSPARSQERRSTASLDV 246 T+RG RW +P R+ T++ DV Sbjct: 794 TTRGGKIPVRWTAPEAIAFRKFTSASDV 821 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.0 bits (42), Expect = 8.6 Identities = 8/19 (42%), Positives = 9/19 (47%) Frame = +3 Query: 465 SATWTSVRTCTPTPYVRWY 521 S + V PTP RWY Sbjct: 254 STSLVCVAQACPTPEYRWY 272 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.0 bits (42), Expect = 8.6 Identities = 8/19 (42%), Positives = 9/19 (47%) Frame = +3 Query: 465 SATWTSVRTCTPTPYVRWY 521 S + V PTP RWY Sbjct: 254 STSLVCVAQACPTPEYRWY 272 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 21.0 bits (42), Expect = 8.6 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = +3 Query: 93 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 191 +H + Y GY P + D A + T+ MK+ Sbjct: 187 NHQLISYAGYKNPDGTIIGDPANIEFTELCMKL 219 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 184,043 Number of Sequences: 438 Number of extensions: 4254 Number of successful extensions: 13 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 16317903 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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