BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1107X (560 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P48643 Cluster: T-complex protein 1 subunit epsilon; n=... 89 7e-17 UniRef50_A6S086 Cluster: Putative uncharacterized protein; n=1; ... 68 1e-10 UniRef50_Q0IVI8 Cluster: Os10g0568200 protein; n=1; Oryza sativa... 45 0.001 UniRef50_Q98S00 Cluster: T-complex protein1, epsilon-SU; n=1; Gu... 40 0.053 UniRef50_Q54TX7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.069 UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20; Euryarchaeota... 38 0.16 UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13; Euryarch... 38 0.16 UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit, puta... 38 0.21 UniRef50_Q2NHT5 Cluster: ThsA; n=1; Methanosphaera stadtmanae DS... 37 0.28 UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep: ... 36 0.65 UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1; Psychrofl... 35 1.5 UniRef50_Q55BE5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5 UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24; Thermop... 34 2.0 UniRef50_Q8THU8 Cluster: Hsp60; n=4; Archaea|Rep: Hsp60 - Methan... 34 2.6 UniRef50_O30560 Cluster: Thermosome subunit 2; n=8; Euryarchaeot... 33 3.4 UniRef50_Q2BM13 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6 UniRef50_Q9V2S9 Cluster: Thermosome subunit alpha; n=34; Archaea... 33 6.0 UniRef50_Q0W8R0 Cluster: Chaperonin Hsp60; n=1; uncultured metha... 32 8.0 >UniRef50_P48643 Cluster: T-complex protein 1 subunit epsilon; n=123; Eukaryota|Rep: T-complex protein 1 subunit epsilon - Homo sapiens (Human) Length = 541 Score = 89.0 bits (211), Expect = 7e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181 +ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P Sbjct: 478 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 537 Query: 182 DS 187 +S Sbjct: 538 ES 539 >UniRef50_A6S086 Cluster: Putative uncharacterized protein; n=1; Botryotinia fuckeliana B05.10|Rep: Putative uncharacterized protein - Botryotinia fuckeliana B05.10 Length = 444 Score = 68.1 bits (159), Expect = 1e-10 Identities = 32/56 (57%), Positives = 40/56 (71%) Frame = +2 Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 K+RQ E N LG+DCM GSNDM+ VI+ L KKQQ+ LATQL +M+LKI +V Sbjct: 379 KSRQATEKNTRLGVDCMQTGSNDMRDAFVIDPLIGKKQQLMLATQLCRMVLKINNV 434 >UniRef50_Q0IVI8 Cluster: Os10g0568200 protein; n=1; Oryza sativa (japonica cultivar-group)|Rep: Os10g0568200 protein - Oryza sativa subsp. japonica (Rice) Length = 92 Score = 44.8 bits (101), Expect = 0.001 Identities = 24/55 (43%), Positives = 35/55 (63%) Frame = +2 Query: 20 ENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPAD 184 ++NP+ GIDC +N ++ N K+QQI L TQ+VKMILKI D+ + +D Sbjct: 44 DSNPHHGIDCNCIRTNGIREQN-------KQQQIVLTTQVVKMILKIDDIITQSD 91 >UniRef50_Q98S00 Cluster: T-complex protein1, epsilon-SU; n=1; Guillardia theta|Rep: T-complex protein1, epsilon-SU - Guillardia theta (Cryptomonas phi) Length = 511 Score = 39.5 bits (88), Expect = 0.053 Identities = 18/53 (33%), Positives = 30/53 (56%) Frame = +2 Query: 11 QVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 Q+ +NN +G+ + DMK + E+L K+QQ ATQ+ IL+I ++ Sbjct: 456 QIKQNNSNIGVGNLKNHVLDMKKQKIYETLLGKQQQFLAATQMACSILRIDEI 508 >UniRef50_Q54TX7 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 631 Score = 39.1 bits (87), Expect = 0.069 Identities = 19/49 (38%), Positives = 29/49 (59%) Frame = +2 Query: 23 NNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 N+ +GID DM V+E+L +K QI +AT++V ILKI ++ Sbjct: 573 NSKNIGIDLKVNSIGDMFEYGVLETLSNKLAQITMATEIVTSILKIDEI 621 >UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20; Euryarchaeota|Rep: Thermosome subunit - Pyrococcus abyssi Length = 550 Score = 37.9 bits (84), Expect = 0.16 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = +2 Query: 20 ENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 E P +GID DM VIE + KKQ I A++ MIL+I DV Sbjct: 472 EKGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDV 521 >UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13; Euryarchaeota|Rep: Thermosome subunit beta - Halobacterium salinarium (Halobacterium halobium) Length = 556 Score = 37.9 bits (84), Expect = 0.16 Identities = 15/55 (27%), Positives = 32/55 (58%) Frame = +2 Query: 20 ENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPAD 184 +++ ++G++ +S D V+E H+K+Q + A++ ++LKI D+ S D Sbjct: 475 DDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDIISAGD 529 >UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit, putative; n=2; Theileria|Rep: T-complex protein 1, beta subunit, putative - Theileria parva Length = 664 Score = 37.5 bits (83), Expect = 0.21 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = +2 Query: 17 AENNPYLGIDCMSKGS-NDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 ++ N GID + KGS DM + V ES SK QI LAT+ + I+++ D+ Sbjct: 602 SKGNVSAGID-IDKGSVGDMMKLGVFESYKSKLSQICLATEAAESIVRVDDI 652 >UniRef50_Q2NHT5 Cluster: ThsA; n=1; Methanosphaera stadtmanae DSM 3091|Rep: ThsA - Methanosphaera stadtmanae (strain DSM 3091) Length = 535 Score = 37.1 bits (82), Expect = 0.28 Identities = 17/47 (36%), Positives = 31/47 (65%) Frame = +2 Query: 35 LGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRS 175 +G++ + + +DMKA +++S +SKK + AT++ IL+I DV S Sbjct: 470 MGVNVIKRDVSDMKADKILDSQNSKKAIVESATEIAGEILRIDDVVS 516 >UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep: Thermosome subunit - Methanopyrus kandleri Length = 545 Score = 35.9 bits (79), Expect = 0.65 Identities = 19/44 (43%), Positives = 24/44 (54%) Frame = +2 Query: 38 GIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 GID DM V+E L K Q +A AT+ +MIL+I DV Sbjct: 480 GIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDV 523 >UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1; Psychroflexus torquis ATCC 700755|Rep: HSP60 family chaperonin - Psychroflexus torquis ATCC 700755 Length = 131 Score = 34.7 bits (76), Expect = 1.5 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 14 VAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 ++E G D + G M+ + V+E L KQ I AT++ ILKI D+ Sbjct: 74 ISEGRIQFGPDVENGGITSMQDLGVVEPLDLVKQAILSATEVTSAILKIDDI 125 >UniRef50_Q55BE5 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 624 Score = 34.7 bits (76), Expect = 1.5 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +2 Query: 35 LGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPADSI 190 LGID + DMK MN+IE L KK I + Q V +L+I + S + + Sbjct: 573 LGIDGWTGEIKDMKQMNIIEPLILKKSIITASIQAVIALLRIDTIVSSSSFV 624 >UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24; Thermoprotei|Rep: Thermosome subunit alpha - Sulfolobus tokodaii Length = 559 Score = 34.3 bits (75), Expect = 2.0 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +2 Query: 38 GIDCMS-KGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181 G+D M+ K ++DM A+NV+E + K Q + A + ILKI D+ + A Sbjct: 484 GVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAAA 532 >UniRef50_Q8THU8 Cluster: Hsp60; n=4; Archaea|Rep: Hsp60 - Methanosarcina acetivorans Length = 543 Score = 33.9 bits (74), Expect = 2.6 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +2 Query: 11 QVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169 Q + N G++ + DM NV+E L K Q I AT+ MIL+I DV Sbjct: 467 QHEKGNKRAGLNVYTGKIEDMFENNVVEPLRIKTQAINAATEAAIMILRIDDV 519 >UniRef50_O30560 Cluster: Thermosome subunit 2; n=8; Euryarchaeota|Rep: Thermosome subunit 2 - Halobacterium volcanii (Haloferax volcanii) Length = 557 Score = 33.5 bits (73), Expect = 3.4 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = +2 Query: 38 GIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPAD 184 G++ + D V+E+ H+K+Q +A A++ ++LKI D+ + D Sbjct: 479 GLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDIIAAGD 527 >UniRef50_Q2BM13 Cluster: Putative uncharacterized protein; n=1; Neptuniibacter caesariensis|Rep: Putative uncharacterized protein - Neptuniibacter caesariensis Length = 129 Score = 33.1 bits (72), Expect = 4.6 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = -1 Query: 524 ERAILRIWINHGVYTLLLWNSNFPAIVSN 438 +RA+ +WI+ GV TLLLW SN+ A V N Sbjct: 15 QRAVYALWISIGV-TLLLWISNYSAGVMN 42 >UniRef50_Q9V2S9 Cluster: Thermosome subunit alpha; n=34; Archaea|Rep: Thermosome subunit alpha - Sulfolobus solfataricus Length = 559 Score = 32.7 bits (71), Expect = 6.0 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +2 Query: 38 GIDCMS-KGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181 G+D + K +D+ A+N+IE + K Q + AT+ ILKI D+ + A Sbjct: 483 GVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLIAAA 531 >UniRef50_Q0W8R0 Cluster: Chaperonin Hsp60; n=1; uncultured methanogenic archaeon RC-I|Rep: Chaperonin Hsp60 - Uncultured methanogenic archaeon RC-I Length = 536 Score = 32.3 bits (70), Expect = 8.0 Identities = 18/62 (29%), Positives = 31/62 (50%) Frame = +2 Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181 K++ A++ G++ DM V+E + K Q I AT+ MIL+I D+ + A Sbjct: 467 KSKHGAKDGKNFGLNVYKGKPMDMLKEGVVEPMKLKTQAIQSATEAAIMILRIDDILAAA 526 Query: 182 DS 187 + Sbjct: 527 QT 528 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 529,446,402 Number of Sequences: 1657284 Number of extensions: 9497084 Number of successful extensions: 18794 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18368 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18792 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 37488397230 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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