Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1107X
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   1.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.6  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 503 WINHGVYTLLLWNSNFPAIVSNHSH 429
           +I HG   L++   N P +  NH H
Sbjct: 189 YIQHGYLELVIPPENGPKMTPNHLH 213


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 503 WINHGVYTLLLWNSNFPAIVSNHSH 429
           +I HG   L++   N P +  NH H
Sbjct: 189 YIQHGYLELVIPPENGPKMTPNHLH 213


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 503 WINHGVYTLLLWNSNFPAIVSNHSH 429
           +I HG   L++   N P +  NH H
Sbjct: 189 YIQHGYLELVIPPENGPKMTPNHLH 213


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 20  ENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQ 118
           + NP+L  DC    + +    +  E  HS K++
Sbjct: 20  KTNPFLASDCDKNQNTEHNYTHNNEMYHSVKEE 52


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 20  ENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQ 118
           + NP+L  DC    + +    +  E  H  K++
Sbjct: 20  KTNPFLASDCDKNQNTEQNYTHNNEMYHRVKEE 52


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 20  ENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQ 118
           + NP+L  DC    + +    +  E  H  K++
Sbjct: 20  KTNPFLASDCDKNQNTEQNYTHNNEMYHRVKEE 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,233
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)