Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1107X
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein. 89 1e-17
BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing T... 89 1e-17
BC009454-1|AAH09454.1| 387|Homo sapiens Unknown (protein for IM... 89 1e-17
BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing T... 89 1e-17
BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for IM... 89 1e-17
AF275798-1|AAG23814.1| 171|Homo sapiens PNAS-102 protein. 89 1e-17
BT019966-1|AAV38769.1| 535|Homo sapiens chaperonin containing T... 31 3.7
BC113516-1|AAI13517.1| 535|Homo sapiens chaperonin containing T... 31 3.7
BC113514-1|AAI13515.1| 535|Homo sapiens chaperonin containing T... 31 3.7
AF026293-1|AAC96012.1| 535|Homo sapiens chaperonin containing t... 31 3.7
AF026166-1|AAC98906.1| 535|Homo sapiens chaperonin-containing T... 31 3.7
BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein. 30 6.4
AL121575-8|CAB92073.1| 886|Homo sapiens cofactor required for S... 30 6.4
AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for S... 30 6.4
AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for S... 30 6.4
AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for S... 30 6.4
AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for S... 30 6.4
AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor int... 30 6.4
AF104255-1|AAD12724.1| 936|Homo sapiens transcriptional co-acti... 30 6.4
AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein. 30 6.4
>D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein.
Length = 553
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181
+ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P
Sbjct: 490 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 549
Query: 182 DS 187
+S
Sbjct: 550 ES 551
>BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181
+ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P
Sbjct: 478 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 537
Query: 182 DS 187
+S
Sbjct: 538 ES 539
>BC009454-1|AAH09454.1| 387|Homo sapiens Unknown (protein for
IMAGE:3534054) protein.
Length = 387
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181
+ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P
Sbjct: 324 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 383
Query: 182 DS 187
+S
Sbjct: 384 ES 385
>BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181
+ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P
Sbjct: 478 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 537
Query: 182 DS 187
+S
Sbjct: 538 ES 539
>BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for
IMAGE:3543711) protein.
Length = 539
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181
+ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P
Sbjct: 476 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 535
Query: 182 DS 187
+S
Sbjct: 536 ES 537
>AF275798-1|AAG23814.1| 171|Homo sapiens PNAS-102 protein.
Length = 171
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 2 KARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDVRSPA 181
+ARQV E NP LGIDC+ KG+NDMK +VIE+L KKQQI+LATQ+V+MILKI D+R P
Sbjct: 108 RARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 167
Query: 182 DS 187
+S
Sbjct: 168 ES 169
>BT019966-1|AAV38769.1| 535|Homo sapiens chaperonin containing
TCP1, subunit 2 (beta) protein.
Length = 535
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 17 AENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169
+E N G+D DM + + ES K+Q + A + ++IL++ ++
Sbjct: 470 SEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNI 520
>BC113516-1|AAI13517.1| 535|Homo sapiens chaperonin containing
TCP1, subunit 2 (beta) protein.
Length = 535
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 17 AENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169
+E N G+D DM + + ES K+Q + A + ++IL++ ++
Sbjct: 470 SEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNI 520
>BC113514-1|AAI13515.1| 535|Homo sapiens chaperonin containing
TCP1, subunit 2 (beta) protein.
Length = 535
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 17 AENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169
+E N G+D DM + + ES K+Q + A + ++IL++ ++
Sbjct: 470 SEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNI 520
>AF026293-1|AAC96012.1| 535|Homo sapiens chaperonin containing
t-complex polypeptide 1, beta subunit protein.
Length = 535
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 17 AENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169
+E N G+D DM + + ES K+Q + A + ++IL++ ++
Sbjct: 470 SEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNI 520
>AF026166-1|AAC98906.1| 535|Homo sapiens chaperonin-containing
TCP-1 beta subunit homolog protein.
Length = 535
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 17 AENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIGDV 169
+E N G+D DM + + ES K+Q + A + ++IL++ ++
Sbjct: 470 SEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNI 520
>BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.
Length = 1359
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 508 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
>AL121575-8|CAB92073.1| 886|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 886
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 514 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 556
>AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1368
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 508 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
>AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1374
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 514 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 556
>AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1364
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 508 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
>AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1365
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 514 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 556
>AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor
interacting protein protein.
Length = 1368
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 508 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
>AF104255-1|AAD12724.1| 936|Homo sapiens transcriptional
co-activator CRSP130 protein.
Length = 936
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 564 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 606
>AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.
Length = 1421
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 PYLGIDCMSKGSNDMKAMNVIESL--HSKKQQI-ALATQLVKM 148
P G +CM+ GS MN+++SL H+K I ++AT+++K+
Sbjct: 561 PLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,166,074
Number of Sequences: 237096
Number of extensions: 1514636
Number of successful extensions: 2192
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2192
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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